RNA–Protein interactions for RNA: ENST00000262539.7

PTPN3-201, Transcript of protein tyrosine phosphatase, non-receptor type 3, humanhuman

TSL 5 BASIC

Gene PTPN3, Length 6,832 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3-201ENST00000262539 PXMP2Q9NR77 195 aa8.87□□□□□ -0.99
PTPN3-201ENST00000262539 MAST2Q6P0Q8 1798 aa8.87□□□□□ -0.99
PTPN3-201ENST00000262539 COL5A3P25940 1745 aaPredicted RBP8.86□□□□□ -0.99
PTPN3-201ENST00000262539 SMAPO00193 183 aa8.86□□□□□ -0.99
PTPN3-201ENST00000262539 VEGFAP15692 232 aaPredicted RBP8.86□□□□□ -0.99
PTPN3-201ENST00000262539 EIF4A3P38919 411 aaKnown RBP8.86□□□□□ -0.99
PTPN3-201ENST00000262539 GPRC5AQ8NFJ5 357 aa8.86□□□□□ -0.99
PTPN3-201ENST00000262539 AGPAT3Q9NRZ7 376 aa8.86□□□□□ -0.99
PTPN3-201ENST00000262539 GIPC1O14908 333 aa8.86□□□□□ -0.99
PTPN3-201ENST00000262539 SLITRK3O94933 977 aa8.86□□□□□ -0.99
PTPN3-201ENST00000262539 CTTNQ14247 550 aaKnown RBP8.86□□□□□ -0.99
PTPN3-201ENST00000262539 FAM102BQ5T8I3 360 aa8.86□□□□□ -0.99
PTPN3-201ENST00000262539 C8orf74Q6P047 294 aa8.86□□□□□ -0.99
PTPN3-201ENST00000262539 ZFPM1Q8IX07 1006 aa8.86□□□□□ -0.99
PTPN3-201ENST00000262539 ABI1Q8IZP0 508 aa8.86□□□□□ -0.99
PTPN3-201ENST00000262539 TEPSINQ96N21 525 aa8.86□□□□□ -0.99
PTPN3-201ENST00000262539 SELENOSQ9BQE4 189 aa8.86□□□□□ -0.99
PTPN3-201ENST00000262539 KCNF1Q9H3M0 494 aa8.86□□□□□ -0.99
PTPN3-201ENST00000262539 GCNT4Q9P109 453 aa8.86□□□□□ -0.99
PTPN3-201ENST00000262539 STRIP2Q9ULQ0 834 aa8.86□□□□□ -0.99
PTPN3-201ENST00000262539 UBE2Q2LH0YL09 131 aa8.86□□□□□ -0.99
PTPN3-201ENST00000262539 DTNBO60941 627 aa8.86□□□□□ -0.99
PTPN3-201ENST00000262539 FMO5P49326 533 aa8.86□□□□□ -0.99
PTPN3-201ENST00000262539 TRAPPC11Q7Z392 1133 aa8.86□□□□□ -0.99
PTPN3-201ENST00000262539 SMYD4Q8IYR2 804 aaPredicted RBP8.86□□□□□ -0.99
PTPN3-201ENST00000262539 GADD45GIP1Q8TAE8 222 aaPredicted RBP8.86□□□□□ -0.99
PTPN3-201ENST00000262539 MRPL4Q9BYD3 311 aaKnown RBP8.86□□□□□ -0.99
PTPN3-201ENST00000262539 SLITRK6Q9H5Y7 841 aa8.86□□□□□ -0.99
PTPN3-201ENST00000262539 VIPAS39Q9H9C1 493 aa8.86□□□□□ -0.99
PTPN3-201ENST00000262539 NLRC4Q9NPP4 1024 aa8.86□□□□□ -0.99
PTPN3-201ENST00000262539 GTF3C4Q9UKN8 822 aa8.86□□□□□ -0.99
PTPN3-201ENST00000262539 FAM86B1E9PN63 330 aa8.86□□□□□ -0.99
PTPN3-201ENST00000262539 IRF6O14896 467 aa8.86□□□□□ -0.99
PTPN3-201ENST00000262539 HIP1RO75146 1068 aa8.86□□□□□ -0.99
PTPN3-201ENST00000262539 GH1P01241 217 aa8.86□□□□□ -0.99
PTPN3-201ENST00000262539 FAM86B2P0C5J1 330 aa8.86□□□□□ -0.99
PTPN3-201ENST00000262539 ZSCAN20P17040 1043 aaPredicted RBP8.86□□□□□ -0.99
PTPN3-201ENST00000262539 PPFIA1Q13136 1202 aa8.86□□□□□ -0.99
PTPN3-201ENST00000262539 RUFY4Q6ZNE9 571 aa8.86□□□□□ -0.99
PTPN3-201ENST00000262539 CCDC25Q86WR0 208 aa8.86□□□□□ -0.99
PTPN3-201ENST00000262539 MTRQ99707 1265 aa8.86□□□□□ -0.99
PTPN3-201ENST00000262539 ZNF518BQ9C0D4 1074 aa8.86□□□□□ -0.99
PTPN3-201ENST00000262539 TMEM8AQ9HCN3 771 aa8.86□□□□□ -0.99
PTPN3-201ENST00000262539 ADAMTS5Q9UNA0 930 aa8.86□□□□□ -0.99
PTPN3-201ENST00000262539 A0A087X0B3 334 aa8.86□□□□□ -0.99
PTPN3-201ENST00000262539 UCHL3P15374 230 aa8.86□□□□□ -0.99
PTPN3-201ENST00000262539 NSFP46459 744 aaKnown RBP8.86□□□□□ -0.99
PTPN3-201ENST00000262539 CCDC6Q16204 474 aa8.86□□□□□ -0.99
PTPN3-201ENST00000262539 UTP14CQ5TAP6 766 aaKnown RBP8.86□□□□□ -0.99
PTPN3-201ENST00000262539 POMGNT1Q8WZA1 660 aa8.86□□□□□ -0.99
PTPN3-201ENST00000262539 SMC6Q96SB8 1091 aa8.86□□□□□ -0.99
PTPN3-201ENST00000262539 SPATC1LQ9H0A9 340 aa8.86□□□□□ -0.99
PTPN3-201ENST00000262539 CTTNBP2NLQ9P2B4 639 aa8.86□□□□□ -0.99
PTPN3-201ENST00000262539 PGRMC1O00264 195 aaKnown RBP8.85□□□□□ -0.99
PTPN3-201ENST00000262539 IL18RAPO95256 599 aa8.85□□□□□ -0.99
PTPN3-201ENST00000262539 TMEM191BP0C7N4 346 aa8.85□□□□□ -0.99
PTPN3-201ENST00000262539 FXR1P51114 621 aaKnown RBP eCLIP8.85□□□□□ -0.99
PTPN3-201ENST00000262539 NAB2Q15742 525 aa8.85□□□□□ -0.99
PTPN3-201ENST00000262539 PLPPR4Q7Z2D5 763 aa8.85□□□□□ -0.99
PTPN3-201ENST00000262539 PARD3BQ8TEW8 1205 aa8.85□□□□□ -0.99
PTPN3-201ENST00000262539 CARD6Q9BX69 1037 aa8.85□□□□□ -0.99
PTPN3-201ENST00000262539 A1CFQ9NQ94 594 aaKnown RBP8.85□□□□□ -0.99
PTPN3-201ENST00000262539 GABBR1Q9UBS5 961 aa8.85□□□□□ -0.99
PTPN3-201ENST00000262539 ZBTB48P10074 688 aaPredicted RBP8.85□□□□□ -0.99
PTPN3-201ENST00000262539 IRX5P78411 483 aaPredicted RBP8.85□□□□□ -0.99
PTPN3-201ENST00000262539 CALCOCO2Q13137 446 aa8.85□□□□□ -0.99
PTPN3-201ENST00000262539 SAMD7Q7Z3H4 446 aa8.85□□□□□ -0.99
PTPN3-201ENST00000262539 ATP8B4Q8TF62 1192 aa8.85□□□□□ -0.99
PTPN3-201ENST00000262539 GRK7Q8WTQ7 553 aa8.85□□□□□ -0.99
PTPN3-201ENST00000262539 FAM114A2Q9NRY5 505 aa8.85□□□□□ -0.99
PTPN3-201ENST00000262539 APEX2Q9UBZ4 518 aa8.85□□□□□ -0.99
PTPN3-201ENST00000262539 SART1O43290 800 aaKnown RBP8.85□□□□□ -0.99
PTPN3-201ENST00000262539 MED7O43513 233 aa8.85□□□□□ -0.99
PTPN3-201ENST00000262539 TOM1L1O75674 476 aa8.85□□□□□ -0.99
PTPN3-201ENST00000262539 CD44P16070 742 aaKnown RBP8.85□□□□□ -0.99
PTPN3-201ENST00000262539 VAMP7P51809 220 aa8.85□□□□□ -0.99
PTPN3-201ENST00000262539 ITKQ08881 620 aa8.85□□□□□ -0.99
PTPN3-201ENST00000262539 PLCB4Q15147 1175 aa8.85□□□□□ -0.99
PTPN3-201ENST00000262539 NBPF12Q5TAG4 269 aaPredicted RBP8.85□□□□□ -0.99
PTPN3-201ENST00000262539 KLHDC7AQ5VTJ3 777 aa8.85□□□□□ -0.99
PTPN3-201ENST00000262539 EFCAB13Q8IY85 973 aa8.85□□□□□ -0.99
PTPN3-201ENST00000262539 KIAA0895Q8NCT3 520 aa8.85□□□□□ -0.99
PTPN3-201ENST00000262539 GABPB2Q8TAK5 448 aaPredicted RBP8.85□□□□□ -0.99
PTPN3-201ENST00000262539 LENG9Q96B70 501 aa8.85□□□□□ -0.99
PTPN3-201ENST00000262539 VCPIP1Q96JH7 1222 aa8.85□□□□□ -0.99
PTPN3-201ENST00000262539 CARD9Q9H257 536 aa8.85□□□□□ -0.99
PTPN3-201ENST00000262539 ERAP1Q9NZ08 941 aa8.85□□□□□ -0.99
PTPN3-201ENST00000262539 CYP2J2P51589 502 aa8.85□□□□□ -0.99
PTPN3-201ENST00000262539 TSTA3Q13630 321 aaPredicted RBP8.85□□□□□ -0.99
PTPN3-201ENST00000262539 ZNF467Q7Z7K2 595 aaPredicted RBP8.85□□□□□ -0.99
PTPN3-201ENST00000262539 DPP9Q86TI2 863 aa8.85□□□□□ -0.99
PTPN3-201ENST00000262539 KATNAL1Q9BW62 490 aa8.85□□□□□ -0.99
PTPN3-201ENST00000262539 NSRP1Q9H0G5 558 aaKnown RBP8.85□□□□□ -0.99
PTPN3-201ENST00000262539 MYH3P11055 1940 aa8.85□□□□□ -0.99
PTPN3-201ENST00000262539 GLTPD2A6NH11 291 aa8.85□□□□□ -0.99
PTPN3-201ENST00000262539 SOX5P35711 763 aa8.85□□□□□ -0.99
PTPN3-201ENST00000262539 SPIRE1Q08AE8 756 aa8.85□□□□□ -0.99
PTPN3-201ENST00000262539 SIAH1Q8IUQ4 282 aa8.85□□□□□ -0.99
PTPN3-201ENST00000262539 RSPH1Q8WYR4 309 aa8.85□□□□□ -0.99
PTPN3-201ENST00000262539 AGBL1Q96MI9 1066 aa8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms