RNA–Protein interactions for RNA: ENST00000262396.10

TRAF4-202, Transcript of TNF receptor associated factor 4, humanhuman

TSL 1 (best) BASIC

Gene TRAF4, Length 683 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-202ENST00000262396 NRDE2Q9H7Z3 1164 aa13.65□□□□□ -0.22
TRAF4-202ENST00000262396 GJB4Q9NTQ9 266 aa13.65□□□□□ -0.22
TRAF4-202ENST00000262396 AGPAT5Q9NUQ2 364 aa13.65□□□□□ -0.22
TRAF4-202ENST00000262396 VAV3Q9UKW4 847 aa13.65□□□□□ -0.22
TRAF4-202ENST00000262396 FNDC1Q4ZHG4 1894 aaPredicted RBP13.65□□□□□ -0.22
TRAF4-202ENST00000262396 CNTNAP2Q9UHC6 1331 aa13.64□□□□□ -0.23
TRAF4-202ENST00000262396 PLXNA4Q9HCM2 1894 aa13.64□□□□□ -0.23
TRAF4-202ENST00000262396 OFD1O75665 1012 aa13.64□□□□□ -0.23
TRAF4-202ENST00000262396 STBD1O95210 358 aa13.64□□□□□ -0.23
TRAF4-202ENST00000262396 POMCP01189 267 aa13.64□□□□□ -0.23
TRAF4-202ENST00000262396 GALTP07902 379 aa13.64□□□□□ -0.23
TRAF4-202ENST00000262396 TXKP42681 527 aa13.64□□□□□ -0.23
TRAF4-202ENST00000262396 OR1G1P47890 313 aa13.64□□□□□ -0.23
TRAF4-202ENST00000262396 SIGLEC14Q08ET2 396 aa13.64□□□□□ -0.23
TRAF4-202ENST00000262396 NR5A1Q13285 461 aa13.64□□□□□ -0.23
TRAF4-202ENST00000262396 NPY5RQ15761 445 aa13.64□□□□□ -0.23
TRAF4-202ENST00000262396 PTPN21Q16825 1174 aa13.64□□□□□ -0.23
TRAF4-202ENST00000262396 KIAA1841Q6NSI8 718 aa13.64□□□□□ -0.23
TRAF4-202ENST00000262396 NOTUMQ6P988 496 aa13.64□□□□□ -0.23
TRAF4-202ENST00000262396 SYCE2Q6PIF2 218 aa13.64□□□□□ -0.23
TRAF4-202ENST00000262396 DDX53Q86TM3 631 aaKnown RBP13.64□□□□□ -0.23
TRAF4-202ENST00000262396 TDRD5Q8NAT2 981 aaKnown RBP13.64□□□□□ -0.23
TRAF4-202ENST00000262396 SUSD6Q92537 303 aa13.64□□□□□ -0.23
TRAF4-202ENST00000262396 EIF2AK1Q9BQI3 630 aaKnown RBP13.64□□□□□ -0.23
TRAF4-202ENST00000262396 APOL6Q9BWW8 343 aa13.64□□□□□ -0.23
TRAF4-202ENST00000262396 ADAM7Q9H2U9 754 aa13.64□□□□□ -0.23
TRAF4-202ENST00000262396 MRPL17Q9NRX2 175 aaKnown RBP13.64□□□□□ -0.23
TRAF4-202ENST00000262396 PPP4R2Q9NY27 417 aa13.64□□□□□ -0.23
TRAF4-202ENST00000262396 C2CD2LO14523 706 aa13.63□□□□□ -0.23
TRAF4-202ENST00000262396 NEMFO60524 1076 aa13.63□□□□□ -0.23
TRAF4-202ENST00000262396 ZNF623O75123 536 aa13.63□□□□□ -0.23
TRAF4-202ENST00000262396 URODP06132 367 aa13.63□□□□□ -0.23
TRAF4-202ENST00000262396 CTSAP10619 480 aa13.63□□□□□ -0.23
TRAF4-202ENST00000262396 AXLP30530 894 aa13.63□□□□□ -0.23
TRAF4-202ENST00000262396 SLC11A1P49279 550 aa13.63□□□□□ -0.23
TRAF4-202ENST00000262396 NEK4P51957 841 aa13.63□□□□□ -0.23
TRAF4-202ENST00000262396 FERMT3Q86UX7 667 aa13.63□□□□□ -0.23
TRAF4-202ENST00000262396 ZNF579Q8NAF0 562 aaKnown RBP13.63□□□□□ -0.23
TRAF4-202ENST00000262396 HAS1Q92839 578 aa13.63□□□□□ -0.23
TRAF4-202ENST00000262396 ACSF2Q96CM8 615 aaPredicted RBP13.63□□□□□ -0.23
TRAF4-202ENST00000262396 ZBP1Q9H171 429 aa13.63□□□□□ -0.23
TRAF4-202ENST00000262396 S1PR5Q9H228 398 aa13.63□□□□□ -0.23
TRAF4-202ENST00000262396 DHX33Q9H6R0 707 aaKnown RBP13.63□□□□□ -0.23
TRAF4-202ENST00000262396 TTC12Q9H892 705 aaPredicted RBP13.63□□□□□ -0.23
TRAF4-202ENST00000262396 IFT122Q9HBG6 1241 aa13.63□□□□□ -0.23
TRAF4-202ENST00000262396 SSX2IPQ9Y2D8 614 aa13.63□□□□□ -0.23
TRAF4-202ENST00000262396 PRG3Q9Y2Y8 225 aaPredicted RBP13.63□□□□□ -0.23
TRAF4-202ENST00000262396 DGAT1O75907 488 aa13.62□□□□□ -0.23
TRAF4-202ENST00000262396 WEE2P0C1S8 567 aa13.62□□□□□ -0.23
TRAF4-202ENST00000262396 PTPN5P54829 565 aa13.62□□□□□ -0.23
TRAF4-202ENST00000262396 NHLH1Q02575 133 aa13.62□□□□□ -0.23
TRAF4-202ENST00000262396 MTMR3Q13615 1198 aa13.62□□□□□ -0.23
TRAF4-202ENST00000262396 PCBP1Q15365 356 aaKnown RBP eCLIP13.62□□□□□ -0.234e-7■■■■■ 32.7
TRAF4-202ENST00000262396 BMP8AQ7Z5Y6 402 aa13.62□□□□□ -0.23
TRAF4-202ENST00000262396 DIS3L2Q8IYB7 885 aaKnown RBP13.62□□□□□ -0.23
TRAF4-202ENST00000262396 PLCD3Q8N3E9 789 aa13.62□□□□□ -0.23
TRAF4-202ENST00000262396 FBXL6Q8N531 539 aa13.62□□□□□ -0.23
TRAF4-202ENST00000262396 C12orf76Q8N812 135 aaPredicted RBP13.62□□□□□ -0.23
TRAF4-202ENST00000262396 CCDC51Q96ER9 411 aa13.62□□□□□ -0.23
TRAF4-202ENST00000262396 CEP89Q96ST8 783 aa13.62□□□□□ -0.23
TRAF4-202ENST00000262396 TMEM175Q9BSA9 504 aa13.62□□□□□ -0.23
TRAF4-202ENST00000262396 MFSD1Q9H3U5 465 aa13.62□□□□□ -0.23
TRAF4-202ENST00000262396 DNAJB4Q9UDY4 337 aa13.62□□□□□ -0.23
TRAF4-202ENST00000262396 DPP7Q9UHL4 492 aa13.62□□□□□ -0.23
TRAF4-202ENST00000262396 ATG2AQ2TAZ0 1938 aa13.61□□□□□ -0.23
TRAF4-202ENST00000262396 MEIS3P2A8K0S8 358 aa13.61□□□□□ -0.23
TRAF4-202ENST00000262396 USO1O60763 962 aaKnown RBP13.61□□□□□ -0.23
TRAF4-202ENST00000262396 EPCAMP16422 314 aa13.61□□□□□ -0.23
TRAF4-202ENST00000262396 MRE11P49959 708 aa13.61□□□□□ -0.23
TRAF4-202ENST00000262396 TMC5Q6UXY8 1006 aa13.61□□□□□ -0.23
TRAF4-202ENST00000262396 MAEAQ7L5Y9 396 aa13.61□□□□□ -0.23
TRAF4-202ENST00000262396 TMEM173Q86WV6 379 aaPredicted RBP13.61□□□□□ -0.23
TRAF4-202ENST00000262396 ZNF280BQ86YH2 543 aa13.61□□□□□ -0.23
TRAF4-202ENST00000262396 ZBTB8OSQ8IWT0 167 aa13.61□□□□□ -0.23
TRAF4-202ENST00000262396 KREMEN2Q8NCW0 462 aa13.61□□□□□ -0.23
TRAF4-202ENST00000262396 ERMNQ8TAM6 284 aa13.61□□□□□ -0.23
TRAF4-202ENST00000262396 GTF3C6Q969F1 213 aa13.61□□□□□ -0.23
TRAF4-202ENST00000262396 CPB2Q96IY4 423 aa13.61□□□□□ -0.23
TRAF4-202ENST00000262396 RPS6KC1Q96S38 1066 aa13.61□□□□□ -0.23
TRAF4-202ENST00000262396 POMKQ9H5K3 350 aa13.61□□□□□ -0.23
TRAF4-202ENST00000262396 SFXN1Q9H9B4 322 aa13.61□□□□□ -0.23
TRAF4-202ENST00000262396 ANKEF1Q9NU02 776 aa13.61□□□□□ -0.23
TRAF4-202ENST00000262396 WRAP73Q9P2S5 460 aaPredicted RBP13.61□□□□□ -0.23
TRAF4-202ENST00000262396 PARP2Q9UGN5 583 aa13.61□□□□□ -0.23
TRAF4-202ENST00000262396 FAM205CA6NFA0 338 aa13.6□□□□□ -0.23
TRAF4-202ENST00000262396 LRRIQ4A6NIV6 560 aa13.6□□□□□ -0.23
TRAF4-202ENST00000262396 BTBD18B2RXH4 712 aa13.6□□□□□ -0.23
TRAF4-202ENST00000262396 C2CD4DB7Z1M9 353 aa13.6□□□□□ -0.23
TRAF4-202ENST00000262396 NRP1O14786 923 aa13.6□□□□□ -0.23
TRAF4-202ENST00000262396 ZBTB39O15060 712 aa13.6□□□□□ -0.23
TRAF4-202ENST00000262396 SLITRK3O94933 977 aa13.6□□□□□ -0.23
TRAF4-202ENST00000262396 CTDNEP1O95476 244 aa13.6□□□□□ -0.23
TRAF4-202ENST00000262396 ADH1AP07327 375 aa13.6□□□□□ -0.23
TRAF4-202ENST00000262396 LIG1P18858 919 aa13.6□□□□□ -0.23
TRAF4-202ENST00000262396 NCLP19338 710 aaKnown RBP13.6□□□□□ -0.23
TRAF4-202ENST00000262396 RFX1P22670 979 aa13.6□□□□□ -0.23
TRAF4-202ENST00000262396 MCM7P33993 719 aa13.6□□□□□ -0.23
TRAF4-202ENST00000262396 MLH1P40692 756 aa13.6□□□□□ -0.23
TRAF4-202ENST00000262396 KCNC3Q14003 757 aa13.6□□□□□ -0.23
TRAF4-202ENST00000262396 ME3Q16798 604 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms