RNA–Protein interactions for RNA: ENST00000257909.7

TROAP-201, Transcript of trophinin associated protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TROAP, Length 2,527 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-201ENST00000257909 GALNT15Q8N3T1 639 aa12.36□□□□□ -0.43
TROAP-201ENST00000257909 NAP1L4Q99733 375 aaKnown RBP12.36□□□□□ -0.43
TROAP-201ENST00000257909 CDC42EP4Q9H3Q1 356 aaKnown RBP12.36□□□□□ -0.43
TROAP-201ENST00000257909 TMOD4Q9NZQ9 345 aa12.36□□□□□ -0.43
TROAP-201ENST00000257909 MTUS1Q9ULD2 1270 aa12.36□□□□□ -0.43
TROAP-201ENST00000257909 RPL26L1Q9UNX3 145 aaKnown RBP12.36□□□□□ -0.43
TROAP-201ENST00000257909 RTCBQ9Y3I0 505 aaKnown RBP12.36□□□□□ -0.43
TROAP-201ENST00000257909 ALG6Q9Y672 507 aa12.36□□□□□ -0.43
TROAP-201ENST00000257909 ROBO1Q9Y6N7 1651 aa12.36□□□□□ -0.43
TROAP-201ENST00000257909 C10orf71Q711Q0 1435 aa12.36□□□□□ -0.43
TROAP-201ENST00000257909 GPR75-ASB3A0A0A6YYF3 556 aa12.36□□□□□ -0.43
TROAP-201ENST00000257909 RTN3O95197 1032 aaPredicted RBP12.36□□□□□ -0.43
TROAP-201ENST00000257909 BRAFP15056 766 aa12.36□□□□□ -0.43
TROAP-201ENST00000257909 PEX5P50542 639 aa12.36□□□□□ -0.43
TROAP-201ENST00000257909 RASSF2P50749 326 aa12.36□□□□□ -0.43
TROAP-201ENST00000257909 RRP1BQ14684 758 aaKnown RBP12.36□□□□□ -0.43
TROAP-201ENST00000257909 GNPTABQ3T906 1256 aa12.36□□□□□ -0.43
TROAP-201ENST00000257909 WASHC2DQ5SRD0 308 aa12.36□□□□□ -0.43
TROAP-201ENST00000257909 TTC27Q6P3X3 843 aa12.36□□□□□ -0.43
TROAP-201ENST00000257909 INTS5Q6P9B9 1019 aaKnown RBP12.36□□□□□ -0.43
TROAP-201ENST00000257909 GJB7Q6PEY0 223 aa12.36□□□□□ -0.43
TROAP-201ENST00000257909 PPP1R21Q6ZMI0 780 aa12.36□□□□□ -0.43
TROAP-201ENST00000257909 CCDC25Q86WR0 208 aa12.36□□□□□ -0.43
TROAP-201ENST00000257909 VSIG1Q86XK7 387 aa12.36□□□□□ -0.43
TROAP-201ENST00000257909 CFAP61Q8NHU2 1237 aa12.36□□□□□ -0.43
TROAP-201ENST00000257909 GDAP1Q8TB36 358 aa12.36□□□□□ -0.43
TROAP-201ENST00000257909 TEKT4Q8WW24 435 aa12.36□□□□□ -0.43
TROAP-201ENST00000257909 SYT11Q9BT88 431 aa12.36□□□□□ -0.43
TROAP-201ENST00000257909 TYW1Q9NV66 732 aaKnown RBP12.36□□□□□ -0.43
TROAP-201ENST00000257909 NKIRAS1Q9NYS0 192 aa12.36□□□□□ -0.43
TROAP-201ENST00000257909 ASB3Q9Y575 518 aa12.36□□□□□ -0.43
TROAP-201ENST00000257909 BAG3O95817 575 aa12.35□□□□□ -0.43
TROAP-201ENST00000257909 NR3C1P04150 777 aa12.35□□□□□ -0.43
TROAP-201ENST00000257909 TNFAIP3P21580 790 aa12.35□□□□□ -0.43
TROAP-201ENST00000257909 COILP38432 576 aaPredicted RBP12.35□□□□□ -0.43
TROAP-201ENST00000257909 SSR1P43307 286 aaKnown RBP12.35□□□□□ -0.43
TROAP-201ENST00000257909 CASP5P51878 434 aa12.35□□□□□ -0.43
TROAP-201ENST00000257909 SLC12A3P55017 1021 aa12.35□□□□□ -0.43
TROAP-201ENST00000257909 CGB2Q6NT52 195 aa12.35□□□□□ -0.43
TROAP-201ENST00000257909 PPP1R18Q6NYC8 613 aa12.35□□□□□ -0.43
TROAP-201ENST00000257909 EPM2AIP1Q7L775 607 aaPredicted RBP12.35□□□□□ -0.43
TROAP-201ENST00000257909 CNBD1Q8NA66 436 aa12.35□□□□□ -0.43
TROAP-201ENST00000257909 SLC44A5Q8NCS7 719 aa12.35□□□□□ -0.43
TROAP-201ENST00000257909 NEDD1Q8NHV4 660 aa12.35□□□□□ -0.43
TROAP-201ENST00000257909 ARHGEF26Q96DR7 871 aa12.35□□□□□ -0.43
TROAP-201ENST00000257909 ZSWIM1Q9BR11 485 aa12.35□□□□□ -0.43
TROAP-201ENST00000257909 PITPNM3Q9BZ71 974 aa12.35□□□□□ -0.43
TROAP-201ENST00000257909 THAP2Q9H0W7 228 aa12.35□□□□□ -0.43
TROAP-201ENST00000257909 VCXQ9H320 206 aa12.35□□□□□ -0.43
TROAP-201ENST00000257909 TCEA3O75764 348 aa12.35□□□□□ -0.43
TROAP-201ENST00000257909 CAMTA2O94983 1202 aa12.35□□□□□ -0.43
TROAP-201ENST00000257909 LMNAP02545 664 aaKnown RBP12.35□□□□□ -0.43
TROAP-201ENST00000257909 CREB1P16220 341 aa12.35□□□□□ -0.43
TROAP-201ENST00000257909 ALDH3A1P30838 453 aa12.35□□□□□ -0.43
TROAP-201ENST00000257909 POLGP54098 1239 aaPredicted RBP12.35□□□□□ -0.43
TROAP-201ENST00000257909 YARSP54577 528 aaKnown RBP12.35□□□□□ -0.43
TROAP-201ENST00000257909 SF3B3Q15393 1217 aaKnown RBP12.35□□□□□ -0.43
TROAP-201ENST00000257909 ARSHQ5FYA8 562 aa12.35□□□□□ -0.43
TROAP-201ENST00000257909 C3orf67Q6ZVT6 689 aa12.35□□□□□ -0.43
TROAP-201ENST00000257909 ANKLE1Q8NAG6 615 aa12.35□□□□□ -0.43
TROAP-201ENST00000257909 ASAP3Q8TDY4 903 aa12.35□□□□□ -0.43
TROAP-201ENST00000257909 COA7Q96BR5 231 aa12.35□□□□□ -0.43
TROAP-201ENST00000257909 NUDCD1Q96RS6 583 aa12.35□□□□□ -0.43
TROAP-201ENST00000257909 RPS6KC1Q96S38 1066 aa12.35□□□□□ -0.43
TROAP-201ENST00000257909 EYA3Q99504 573 aa12.35□□□□□ -0.43
TROAP-201ENST00000257909 DHX36Q9H2U1 1008 aaKnown RBP12.35□□□□□ -0.43
TROAP-201ENST00000257909 WHRNQ9P202 907 aa12.35□□□□□ -0.43
TROAP-201ENST00000257909 POTEB3A0JP26 581 aa12.34□□□□□ -0.43
TROAP-201ENST00000257909 POTECB2RU33 542 aa12.34□□□□□ -0.43
TROAP-201ENST00000257909 ACSL3O95573 720 aa12.34□□□□□ -0.43
TROAP-201ENST00000257909 DRAP1Q14919 205 aaPredicted RBP12.34□□□□□ -0.43
TROAP-201ENST00000257909 TCEAL1Q15170 157 aa12.34□□□□□ -0.43
TROAP-201ENST00000257909 SLC5A9Q2M3M2 681 aa12.34□□□□□ -0.43
TROAP-201ENST00000257909 AADACL2Q6P093 401 aa12.34□□□□□ -0.43
TROAP-201ENST00000257909 POTEBQ6S5H4 581 aa12.34□□□□□ -0.43
TROAP-201ENST00000257909 MTHFD1LQ6UB35 978 aa12.34□□□□□ -0.43
TROAP-201ENST00000257909 MORC4Q8TE76 937 aa12.34□□□□□ -0.43
TROAP-201ENST00000257909 FBXO41Q8TF61 875 aa12.34□□□□□ -0.43
TROAP-201ENST00000257909 DNAJC9Q8WXX5 260 aa12.34□□□□□ -0.43
TROAP-201ENST00000257909 UBA5Q9GZZ9 404 aa12.34□□□□□ -0.43
TROAP-201ENST00000257909 MLXIPLQ9NP71 852 aa12.34□□□□□ -0.43
TROAP-201ENST00000257909 ZMYND8Q9ULU4 1186 aaPredicted RBP12.34□□□□□ -0.43
TROAP-201ENST00000257909 COG5Q9UP83 839 aa12.34□□□□□ -0.43
TROAP-201ENST00000257909 STARD13Q9Y3M8 1113 aa12.34□□□□□ -0.43
TROAP-201ENST00000257909 ACTL7BQ9Y614 415 aa12.34□□□□□ -0.43
TROAP-201ENST00000257909 NAV1Q8NEY1 1877 aa12.34□□□□□ -0.43
TROAP-201ENST00000257909 ADGRA3Q8IWK6 1321 aa12.34□□□□□ -0.43
TROAP-201ENST00000257909 MAPK13O15264 365 aa12.34□□□□□ -0.43
TROAP-201ENST00000257909 ECEL1O95672 775 aa12.34□□□□□ -0.43
TROAP-201ENST00000257909 IL9RQ01113 521 aa12.34□□□□□ -0.43
TROAP-201ENST00000257909 BMT2Q1RMZ1 405 aa12.34□□□□□ -0.43
TROAP-201ENST00000257909 BICDL1Q6ZP65 573 aa12.34□□□□□ -0.43
TROAP-201ENST00000257909 MAEAQ7L5Y9 396 aa12.34□□□□□ -0.43
TROAP-201ENST00000257909 FAM13CQ8NE31 585 aa12.34□□□□□ -0.43
TROAP-201ENST00000257909 SH3RF3Q8TEJ3 882 aaPredicted RBP12.34□□□□□ -0.43
TROAP-201ENST00000257909 C7orf43Q8WVR3 580 aa12.34□□□□□ -0.43
TROAP-201ENST00000257909 LRRC37BQ96QE4 947 aa12.34□□□□□ -0.43
TROAP-201ENST00000257909 DDX23Q9BUQ8 820 aaKnown RBP12.34□□□□□ -0.43
TROAP-201ENST00000257909 WNT8AQ9H1J5 351 aa12.34□□□□□ -0.43
TROAP-201ENST00000257909 MYLK2Q9H1R3 596 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 117.3 ms