RNA–Protein interactions for RNA: ENST00000245908.10

SH2D3A-201, Transcript of SH2 domain containing 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SH2D3A, Length 2,296 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D3A-201ENST00000245908 QARSP47897 775 aaKnown RBP23.38■■□□□ 1.33
SH2D3A-201ENST00000245908 C11orf63Q6NUN7 778 aa23.38■■□□□ 1.33
SH2D3A-201ENST00000245908 XXYLT1Q8NBI6 393 aa23.38■■□□□ 1.33
SH2D3A-201ENST00000245908 HSPBP1Q9NZL4 362 aa23.38■■□□□ 1.33
SH2D3A-201ENST00000245908 NDUFAB1O14561 156 aa23.38■■□□□ 1.33
SH2D3A-201ENST00000245908 ASNSP08243 561 aa23.38■■□□□ 1.33
SH2D3A-201ENST00000245908 SNRPFP62306 86 aaKnown RBP23.38■■□□□ 1.33
SH2D3A-201ENST00000245908 GTF2BQ00403 316 aa23.38■■□□□ 1.33
SH2D3A-201ENST00000245908 GUCY1A3Q02108 690 aa23.38■■□□□ 1.33
SH2D3A-201ENST00000245908 PCNX4Q63HM2 1172 aa23.38■■□□□ 1.33
SH2D3A-201ENST00000245908 RAB17Q9H0T7 212 aa23.38■■□□□ 1.33
SH2D3A-201ENST00000245908 EPN3Q9H201 632 aa23.38■■□□□ 1.33
SH2D3A-201ENST00000245908 PGAP2Q9UHJ9 254 aa23.38■■□□□ 1.33
SH2D3A-201ENST00000245908 USP20Q9Y2K6 914 aa23.38■■□□□ 1.33
SH2D3A-201ENST00000245908 FAM169AQ9Y6X4 670 aa23.38■■□□□ 1.33
SH2D3A-201ENST00000245908 SRRM3A6NNA2 597 aaPredicted RBP23.37■■□□□ 1.33
SH2D3A-201ENST00000245908 PMM2O15305 246 aa23.37■■□□□ 1.33
SH2D3A-201ENST00000245908 MDH1P40925 334 aaKnown RBP23.37■■□□□ 1.33
SH2D3A-201ENST00000245908 GCLMP48507 274 aa23.37■■□□□ 1.33
SH2D3A-201ENST00000245908 MAP3K10Q02779 954 aa23.37■■□□□ 1.33
SH2D3A-201ENST00000245908 BIRC3Q13489 604 aa23.37■■□□□ 1.33
SH2D3A-201ENST00000245908 PAXIP1Q6ZW49 1069 aaPredicted RBP23.37■■□□□ 1.33
SH2D3A-201ENST00000245908 MCF2L2Q86YR7 1114 aa23.37■■□□□ 1.33
SH2D3A-201ENST00000245908 OR2W6PQ8NHA6 318 aa23.37■■□□□ 1.33
SH2D3A-201ENST00000245908 ATP8B4Q8TF62 1192 aa23.37■■□□□ 1.33
SH2D3A-201ENST00000245908 CEP89Q96ST8 783 aa23.37■■□□□ 1.33
SH2D3A-201ENST00000245908 COL4A5P29400 1685 aa23.37■■□□□ 1.33
SH2D3A-201ENST00000245908 LOC102724159A0A0B4J2E5 919 aa23.36■■□□□ 1.33
SH2D3A-201ENST00000245908 GOLGA6L10A0A0M3HER8 536 aa23.36■■□□□ 1.33
SH2D3A-201ENST00000245908 PRPF4BQ13523 1007 aaKnown RBP23.36■■□□□ 1.33
SH2D3A-201ENST00000245908 PWP2Q15269 919 aaKnown RBP23.36■■□□□ 1.33
SH2D3A-201ENST00000245908 NAA35Q5VZE5 725 aa23.36■■□□□ 1.33
SH2D3A-201ENST00000245908 RUFY4Q6ZNE9 571 aa23.36■■□□□ 1.33
SH2D3A-201ENST00000245908 ARFGAP2Q8N6H7 521 aa23.36■■□□□ 1.33
SH2D3A-201ENST00000245908 MTMR14Q8NCE2 650 aa23.36■■□□□ 1.33
SH2D3A-201ENST00000245908 PLEKHO2Q8TD55 490 aa23.36■■□□□ 1.33
SH2D3A-201ENST00000245908 UBLCP1Q8WVY7 318 aaPredicted RBP23.36■■□□□ 1.33
SH2D3A-201ENST00000245908 ALG3Q92685 438 aa23.36■■□□□ 1.33
SH2D3A-201ENST00000245908 TRIM51Q9BSJ1 452 aa23.36■■□□□ 1.33
SH2D3A-201ENST00000245908 TIPINQ9BVW5 301 aa23.36■■□□□ 1.33
SH2D3A-201ENST00000245908 ZBTB12Q9Y330 459 aaPredicted RBP23.36■■□□□ 1.33
SH2D3A-201ENST00000245908 ALG6Q9Y672 507 aa23.36■■□□□ 1.33
SH2D3A-201ENST00000245908 MIF4GDA9UHW6 222 aaKnown RBP23.36■■□□□ 1.33
SH2D3A-201ENST00000245908 MYO1FO00160 1098 aa23.36■■□□□ 1.33
SH2D3A-201ENST00000245908 FTLP02792 175 aaPredicted RBP23.36■■□□□ 1.33
SH2D3A-201ENST00000245908 MCCD1P59942 119 aaPredicted RBP23.36■■□□□ 1.33
SH2D3A-201ENST00000245908 MRPS9P82933 396 aaKnown RBP23.36■■□□□ 1.33
SH2D3A-201ENST00000245908 PTGISQ16647 500 aa23.36■■□□□ 1.33
SH2D3A-201ENST00000245908 HAUS6Q7Z4H7 955 aa23.36■■□□□ 1.33
SH2D3A-201ENST00000245908 DPH5Q9H2P9 285 aa23.36■■□□□ 1.33
SH2D3A-201ENST00000245908 SAMM50Q9Y512 469 aa23.36■■□□□ 1.33
SH2D3A-201ENST00000245908 VCAM1P19320 739 aa23.35■■□□□ 1.33
SH2D3A-201ENST00000245908 SPP2Q13103 211 aa23.35■■□□□ 1.33
SH2D3A-201ENST00000245908 AGBL2Q5U5Z8 902 aa23.35■■□□□ 1.33
SH2D3A-201ENST00000245908 RPUSD2Q8IZ73 545 aaKnown RBP23.35■■□□□ 1.33
SH2D3A-201ENST00000245908 PRPF38AQ8NAV1 312 aaKnown RBP23.35■■□□□ 1.33
SH2D3A-201ENST00000245908 PSMD1Q99460 953 aa23.35■■□□□ 1.33
SH2D3A-201ENST00000245908 ZNF341Q9BYN7 854 aa23.35■■□□□ 1.33
SH2D3A-201ENST00000245908 ERVK-5Q9HDB9 667 aa23.35■■□□□ 1.33
SH2D3A-201ENST00000245908 RGPD3A6NKT7 1758 aaPredicted RBP23.35■■□□□ 1.33
SH2D3A-201ENST00000245908 RGPD4Q7Z3J3 1758 aa23.35■■□□□ 1.33
SH2D3A-201ENST00000245908 FAM187AA6NFU0 413 aa23.35■■□□□ 1.33
SH2D3A-201ENST00000245908 DR1Q01658 176 aa23.35■■□□□ 1.33
SH2D3A-201ENST00000245908 SPDYCQ5MJ68 293 aa23.35■■□□□ 1.33
SH2D3A-201ENST00000245908 DUPD1Q68J44 220 aa23.35■■□□□ 1.33
SH2D3A-201ENST00000245908 B4GALNT4Q76KP1 1039 aa23.35■■□□□ 1.33
SH2D3A-201ENST00000245908 CCDC91Q7Z6B0 441 aa23.35■■□□□ 1.33
SH2D3A-201ENST00000245908 LARGE2Q8N3Y3 721 aa23.35■■□□□ 1.33
SH2D3A-201ENST00000245908 ZSWIM2Q8NEG5 633 aa23.35■■□□□ 1.33
SH2D3A-201ENST00000245908 TBC1D22BQ9NU19 505 aa23.35■■□□□ 1.33
SH2D3A-201ENST00000245908 CTTNBP2NLQ9P2B4 639 aa23.35■■□□□ 1.33
SH2D3A-201ENST00000245908 BCS1LQ9Y276 419 aa23.35■■□□□ 1.33
SH2D3A-201ENST00000245908 TNS1Q9HBL0 1735 aaKnown RBP23.35■■□□□ 1.33
SH2D3A-201ENST00000245908 ATXN2Q99700 1313 aaKnown RBP23.35■■□□□ 1.33
SH2D3A-201ENST00000245908 RTN2O75298 545 aa23.34■■□□□ 1.33
SH2D3A-201ENST00000245908 YWHABP31946 246 aaKnown RBP23.34■■□□□ 1.33
SH2D3A-201ENST00000245908 MXI1P50539 228 aa23.34■■□□□ 1.33
SH2D3A-201ENST00000245908 NCKAP1LP55160 1127 aa23.34■■□□□ 1.33
SH2D3A-201ENST00000245908 GPC5P78333 572 aa23.34■■□□□ 1.33
SH2D3A-201ENST00000245908 ZNF211Q13398 564 aaPredicted RBP23.34■■□□□ 1.33
SH2D3A-201ENST00000245908 MTMR1Q13613 665 aa23.34■■□□□ 1.33
SH2D3A-201ENST00000245908 DHX34Q14147 1143 aaKnown RBP23.34■■□□□ 1.33
SH2D3A-201ENST00000245908 RTKN2Q8IZC4 609 aa23.34■■□□□ 1.33
SH2D3A-201ENST00000245908 IWS1Q96ST2 819 aa23.34■■□□□ 1.33
SH2D3A-201ENST00000245908 TXLNGYQ9BZA5 131 aa23.34■■□□□ 1.33
SH2D3A-201ENST00000245908 TMEM117Q9H0C3 514 aa23.34■■□□□ 1.33
SH2D3A-201ENST00000245908 SLTMQ9NWH9 1034 aaKnown RBP eCLIP23.34■■□□□ 1.33
SH2D3A-201ENST00000245908 ASTN2O75129 1339 aaPredicted RBP23.34■■□□□ 1.33
SH2D3A-201ENST00000245908 SYNGAP1Q96PV0 1343 aa23.34■■□□□ 1.33
SH2D3A-201ENST00000245908 WDR46O15213 610 aaKnown RBP23.34■■□□□ 1.33
SH2D3A-201ENST00000245908 PPFIA2O75334 1257 aa23.34■■□□□ 1.33
SH2D3A-201ENST00000245908 DHX9Q08211 1270 aaKnown RBP23.34■■□□□ 1.33
SH2D3A-201ENST00000245908 C4orf19Q8IY42 314 aa23.34■■□□□ 1.33
SH2D3A-201ENST00000245908 SYTL5Q8TDW5 730 aaPredicted RBP23.34■■□□□ 1.33
SH2D3A-201ENST00000245908 ERP44Q9BS26 406 aa23.34■■□□□ 1.33
SH2D3A-201ENST00000245908 PAGR1Q9BTK6 254 aa23.34■■□□□ 1.33
SH2D3A-201ENST00000245908 CENPHQ9H3R5 247 aa23.34■■□□□ 1.33
SH2D3A-201ENST00000245908 FAM170AA1A519 330 aa23.33■■□□□ 1.33
SH2D3A-201ENST00000245908 MTA2O94776 668 aa23.33■■□□□ 1.33
SH2D3A-201ENST00000245908 SPATS2Q86XZ4 545 aaKnown RBP23.33■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms