RNA–Protein interactions for RNA: ENST00000244360.6

RNF39-201, Transcript of ring finger protein 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF39, Length 2,206 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF39-201ENST00000244360 EIF3HO15372 352 aaKnown RBP eCLIP23.73■■□□□ 1.39
RNF39-201ENST00000244360 NR3C2P08235 984 aa23.73■■□□□ 1.39
RNF39-201ENST00000244360 PLA2G4FQ68DD2 849 aa23.73■■□□□ 1.39
RNF39-201ENST00000244360 NT5DC3Q86UY8 548 aa23.73■■□□□ 1.39
RNF39-201ENST00000244360 SCFD2Q8WU76 684 aa23.73■■□□□ 1.39
RNF39-201ENST00000244360 CALR3Q96L12 384 aaKnown RBP23.73■■□□□ 1.39
RNF39-201ENST00000244360 SH2D3AQ9BRG2 576 aa23.73■■□□□ 1.39
RNF39-201ENST00000244360 FOXN3O00409 490 aaPredicted RBP23.72■■□□□ 1.39
RNF39-201ENST00000244360 ANO5Q75V66 913 aa23.72■■□□□ 1.39
RNF39-201ENST00000244360 PEX26Q7Z412 305 aa23.72■■□□□ 1.39
RNF39-201ENST00000244360 CD302Q8IX05 232 aa23.72■■□□□ 1.39
RNF39-201ENST00000244360 METTL13Q8N6R0 699 aa23.72■■□□□ 1.39
RNF39-201ENST00000244360 TMEM161BQ8NDZ6 487 aa23.72■■□□□ 1.39
RNF39-201ENST00000244360 KRT12Q99456 494 aa23.72■■□□□ 1.39
RNF39-201ENST00000244360 EPB41L5Q9HCM4 733 aa23.72■■□□□ 1.39
RNF39-201ENST00000244360 ZNF214Q9UL59 606 aaPredicted RBP23.72■■□□□ 1.39
RNF39-201ENST00000244360 PCDHA10Q9Y5I2 948 aa23.72■■□□□ 1.39
RNF39-201ENST00000244360 DSG3P32926 999 aa23.72■■□□□ 1.39
RNF39-201ENST00000244360 GUCY2DQ02846 1103 aa23.72■■□□□ 1.39
RNF39-201ENST00000244360 ARHGAP44Q17R89 818 aa23.72■■□□□ 1.39
RNF39-201ENST00000244360 CFAP58Q5T655 872 aa23.72■■□□□ 1.39
RNF39-201ENST00000244360 NLRX1Q86UT6 975 aa23.72■■□□□ 1.39
RNF39-201ENST00000244360 MAP4K3Q8IVH8 894 aa23.72■■□□□ 1.39
RNF39-201ENST00000244360 RASGEF1CQ8N431 466 aa23.72■■□□□ 1.39
RNF39-201ENST00000244360 C1orf131Q8NDD1 294 aaKnown RBP23.72■■□□□ 1.39
RNF39-201ENST00000244360 HES6Q96HZ4 224 aa23.72■■□□□ 1.39
RNF39-201ENST00000244360 ZIM3Q96PE6 472 aa23.72■■□□□ 1.39
RNF39-201ENST00000244360 PICK1Q9NRD5 415 aa23.72■■□□□ 1.39
RNF39-201ENST00000244360 EXOC7Q9UPT5 735 aa23.72■■□□□ 1.39
RNF39-201ENST00000244360 COL11A1P12107 1806 aaPredicted RBP23.72■■□□□ 1.39
RNF39-201ENST00000244360 FAM102BQ5T8I3 360 aa23.71■■□□□ 1.39
RNF39-201ENST00000244360 ARHGEF19Q8IW93 802 aa23.71■■□□□ 1.39
RNF39-201ENST00000244360 EFCAB13Q8IY85 973 aa23.71■■□□□ 1.39
RNF39-201ENST00000244360 ZSWIM2Q8NEG5 633 aa23.71■■□□□ 1.39
RNF39-201ENST00000244360 ZKSCAN4Q969J2 545 aaPredicted RBP23.71■■□□□ 1.39
RNF39-201ENST00000244360 WRNIP1Q96S55 665 aa23.71■■□□□ 1.39
RNF39-201ENST00000244360 TBX20Q9UMR3 447 aa23.71■■□□□ 1.39
RNF39-201ENST00000244360 ATP2A1O14983 1001 aa23.71■■□□□ 1.39
RNF39-201ENST00000244360 STBD1O95210 358 aa23.71■■□□□ 1.39
RNF39-201ENST00000244360 KCNA2P16389 499 aa23.71■■□□□ 1.39
RNF39-201ENST00000244360 GCLMP48507 274 aa23.71■■□□□ 1.39
RNF39-201ENST00000244360 PPATQ06203 517 aa23.71■■□□□ 1.39
RNF39-201ENST00000244360 TTMPQ5BVD1 217 aa23.71■■□□□ 1.39
RNF39-201ENST00000244360 SNRNP48Q6IEG0 339 aaKnown RBP23.71■■□□□ 1.39
RNF39-201ENST00000244360 SPIRE2Q8WWL2 714 aa23.71■■□□□ 1.39
RNF39-201ENST00000244360 PPM1EQ8WY54 764 aa23.71■■□□□ 1.39
RNF39-201ENST00000244360 CTNNBL1Q8WYA6 563 aaPredicted RBP23.71■■□□□ 1.39
RNF39-201ENST00000244360 GJA3Q9Y6H8 435 aa23.71■■□□□ 1.39
RNF39-201ENST00000244360 PGRMC1O00264 195 aaKnown RBP23.7■■□□□ 1.38
RNF39-201ENST00000244360 ADRB2P07550 413 aa23.7■■□□□ 1.38
RNF39-201ENST00000244360 TNFAIP3P21580 790 aa23.7■■□□□ 1.38
RNF39-201ENST00000244360 NPTX2P47972 431 aa23.7■■□□□ 1.38
RNF39-201ENST00000244360 CARSP49589 748 aaKnown RBP23.7■■□□□ 1.38
RNF39-201ENST00000244360 GNGT1P63211 74 aa23.7■■□□□ 1.38
RNF39-201ENST00000244360 DAAM2Q86T65 1068 aa23.7■■□□□ 1.38
RNF39-201ENST00000244360 IQCKQ8N0W5 287 aa23.7■■□□□ 1.38
RNF39-201ENST00000244360 SLC35G2Q8TBE7 412 aa23.7■■□□□ 1.38
RNF39-201ENST00000244360 AGPAT1Q99943 283 aa23.7■■□□□ 1.38
RNF39-201ENST00000244360 BUD13Q9BRD0 619 aaKnown RBP eCLIP23.7■■□□□ 1.38
RNF39-201ENST00000244360 NTPCRQ9BSD7 190 aaKnown RBP23.7■■□□□ 1.38
RNF39-201ENST00000244360 MAF1Q9H063 256 aa23.7■■□□□ 1.38
RNF39-201ENST00000244360 UBE2TQ9NPD8 197 aaPredicted RBP23.7■■□□□ 1.38
RNF39-201ENST00000244360 NFU1Q9UMS0 254 aa23.7■■□□□ 1.38
RNF39-201ENST00000244360 IGSF9BQ9UPX0 1349 aa23.7■■□□□ 1.38
RNF39-201ENST00000244360 C19orf81C9J6K1 198 aa23.69■■□□□ 1.38
RNF39-201ENST00000244360 CEP104O60308 925 aa23.69■■□□□ 1.38
RNF39-201ENST00000244360 ADSSP30520 456 aa23.69■■□□□ 1.38
RNF39-201ENST00000244360 MXI1P50539 228 aa23.69■■□□□ 1.38
RNF39-201ENST00000244360 PPP1R3FQ6ZSY5 799 aaPredicted RBP23.69■■□□□ 1.38
RNF39-201ENST00000244360 APOBEC3FQ8IUX4 373 aaKnown RBP23.69■■□□□ 1.38
RNF39-201ENST00000244360 NSUN6Q8TEA1 469 aaKnown RBP23.69■■□□□ 1.38
RNF39-201ENST00000244360 TMEM117Q9H0C3 514 aa23.69■■□□□ 1.38
RNF39-201ENST00000244360 C17orf75Q9HAS0 396 aa23.69■■□□□ 1.38
RNF39-201ENST00000244360 GRIN2DO15399 1336 aa23.69■■□□□ 1.38
RNF39-201ENST00000244360 ANKRD62A6NC57 917 aa23.69■■□□□ 1.38
RNF39-201ENST00000244360 EBAG9O00559 213 aa23.69■■□□□ 1.38
RNF39-201ENST00000244360 BUB1BO60566 1050 aaPredicted RBP23.69■■□□□ 1.38
RNF39-201ENST00000244360 LRRN2O75325 713 aa23.69■■□□□ 1.38
RNF39-201ENST00000244360 RGS20O76081 388 aa23.69■■□□□ 1.38
RNF39-201ENST00000244360 SMTNP53814 917 aa23.69■■□□□ 1.38
RNF39-201ENST00000244360 HMGCS2P54868 508 aa23.69■■□□□ 1.38
RNF39-201ENST00000244360 KIFAP3Q92845 792 aa23.69■■□□□ 1.38
RNF39-201ENST00000244360 MTFR1LQ9H019 292 aa23.69■■□□□ 1.38
RNF39-201ENST00000244360 OSGEPQ9NPF4 335 aa23.69■■□□□ 1.38
RNF39-201ENST00000244360 NFASCO94856 1347 aa23.69■■□□□ 1.38
RNF39-201ENST00000244360 BHMG1C9JSJ3 638 aaPredicted RBP23.68■■□□□ 1.38
RNF39-201ENST00000244360 RAD51CO43502 376 aa23.68■■□□□ 1.38
RNF39-201ENST00000244360 ZNF862O60290 1169 aa23.68■■□□□ 1.38
RNF39-201ENST00000244360 HADHBP55084 474 aaKnown RBP23.68■■□□□ 1.38
RNF39-201ENST00000244360 RNASE9P60153 205 aaKnown RBP23.68■■□□□ 1.38
RNF39-201ENST00000244360 DMP1Q13316 513 aaPredicted RBP23.68■■□□□ 1.38
RNF39-201ENST00000244360 TCEAL1Q15170 157 aa23.68■■□□□ 1.38
RNF39-201ENST00000244360 OTUD6AQ7L8S5 288 aa23.68■■□□□ 1.38
RNF39-201ENST00000244360 PALB2Q86YC2 1186 aa23.68■■□□□ 1.38
RNF39-201ENST00000244360 ATP6V0A1Q93050 837 aa23.68■■□□□ 1.38
RNF39-201ENST00000244360 TAS2R14Q9NYV8 317 aa23.68■■□□□ 1.38
RNF39-201ENST00000244360 TTC7AQ9ULT0 858 aaPredicted RBP23.68■■□□□ 1.38
RNF39-201ENST00000244360 NOC2LQ9Y3T9 749 aaKnown RBP23.68■■□□□ 1.38
RNF39-201ENST00000244360 ZSCAN5CA6NGD5 496 aaPredicted RBP23.68■■□□□ 1.38
RNF39-201ENST00000244360 ANKRD63C9JTQ0 380 aa23.68■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms