RNA–Protein interactions for RNA: ENST00000241312.8

CSMD2-201, Transcript of CUB and Sushi multiple domains 2, humanhuman

TSL 1 (best)

Gene CSMD2, Length 13,108 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2-201ENST00000241312 KRT14P02533 472 aa7.15□□□□□ -1.26
CSMD2-201ENST00000241312 KRT16P08779 473 aa7.15□□□□□ -1.26
CSMD2-201ENST00000241312 GFPT1Q06210 699 aaPredicted RBP7.15□□□□□ -1.26
CSMD2-201ENST00000241312 KRT33BQ14525 404 aa7.15□□□□□ -1.26
CSMD2-201ENST00000241312 HIC1Q14526 733 aa7.15□□□□□ -1.26
CSMD2-201ENST00000241312 SYDE1Q6ZW31 735 aaPredicted RBP7.15□□□□□ -1.26
CSMD2-201ENST00000241312 KRT27Q7Z3Y8 459 aa7.15□□□□□ -1.26
CSMD2-201ENST00000241312 AGGF1Q8N302 714 aaeCLIP7.15□□□□□ -1.26
CSMD2-201ENST00000241312 C7orf31Q8N865 590 aa7.15□□□□□ -1.26
CSMD2-201ENST00000241312 ZNF555Q8NEP9 628 aa7.15□□□□□ -1.26
CSMD2-201ENST00000241312 SLC26A7Q8TE54 656 aa7.15□□□□□ -1.26
CSMD2-201ENST00000241312 TRABDQ9H4I3 376 aa7.15□□□□□ -1.26
CSMD2-201ENST00000241312 SLC9A2Q9UBY0 812 aa7.15□□□□□ -1.26
CSMD2-201ENST00000241312 SEPT3Q9UH03 358 aa7.15□□□□□ -1.26
CSMD2-201ENST00000241312 SAMD9LQ8IVG5 1584 aa7.15□□□□□ -1.26
CSMD2-201ENST00000241312 LDHAP00338 332 aaKnown RBP7.15□□□□□ -1.26
CSMD2-201ENST00000241312 SKOR1P84550 965 aa7.15□□□□□ -1.26
CSMD2-201ENST00000241312 KCNA1Q09470 495 aa7.15□□□□□ -1.26
CSMD2-201ENST00000241312 DNAL1Q4LDG9 190 aa7.15□□□□□ -1.26
CSMD2-201ENST00000241312 PPIL4Q8WUA2 492 aaKnown RBP eCLIP7.15□□□□□ -1.26
CSMD2-201ENST00000241312 MMTAG2Q9BU76 263 aaKnown RBP7.15□□□□□ -1.26
CSMD2-201ENST00000241312 DNAJC12Q9UKB3 198 aa7.15□□□□□ -1.26
CSMD2-201ENST00000241312 KITP10721 976 aa7.15□□□□□ -1.26
CSMD2-201ENST00000241312 KCNA2P16389 499 aa7.15□□□□□ -1.26
CSMD2-201ENST00000241312 NAA30Q147X3 362 aaPredicted RBP7.15□□□□□ -1.26
CSMD2-201ENST00000241312 RBBP7Q16576 425 aa7.15□□□□□ -1.26
CSMD2-201ENST00000241312 NCAPD2Q15021 1401 aa7.15□□□□□ -1.26
CSMD2-201ENST00000241312 MYH7P12883 1935 aa7.15□□□□□ -1.26
CSMD2-201ENST00000241312 BMP3P12645 472 aa7.15□□□□□ -1.26
CSMD2-201ENST00000241312 CARSP49589 748 aaKnown RBP7.15□□□□□ -1.26
CSMD2-201ENST00000241312 LRRC8EQ6NSJ5 796 aa7.15□□□□□ -1.26
CSMD2-201ENST00000241312 DEFA1P59665 94 aa7.15□□□□□ -1.26
CSMD2-201ENST00000241312 DEFA3P59666 94 aa7.15□□□□□ -1.26
CSMD2-201ENST00000241312 TJAP1Q5JTD0 557 aa7.15□□□□□ -1.26
CSMD2-201ENST00000241312 RFFLQ8WZ73 363 aa7.15□□□□□ -1.26
CSMD2-201ENST00000241312 EPC1Q9H2F5 836 aa7.15□□□□□ -1.26
CSMD2-201ENST00000241312 VIPAS39Q9H9C1 493 aa7.15□□□□□ -1.26
CSMD2-201ENST00000241312 ESYT3A0FGR9 886 aa7.15□□□□□ -1.27
CSMD2-201ENST00000241312 PGM1P36871 562 aa7.15□□□□□ -1.27
CSMD2-201ENST00000241312 NLRP11P59045 1033 aaKnown RBP7.15□□□□□ -1.27
CSMD2-201ENST00000241312 ABCE1P61221 599 aaKnown RBP7.15□□□□□ -1.27
CSMD2-201ENST00000241312 P3H1Q32P28 736 aa7.15□□□□□ -1.27
CSMD2-201ENST00000241312 FAM83BQ5T0W9 1011 aa7.15□□□□□ -1.27
CSMD2-201ENST00000241312 LRRC31Q6UY01 552 aa7.15□□□□□ -1.27
CSMD2-201ENST00000241312 HEY1Q9Y5J3 304 aa7.15□□□□□ -1.27
CSMD2-201ENST00000241312 GDF11O95390 407 aa7.15□□□□□ -1.27
CSMD2-201ENST00000241312 OSBPP22059 807 aa7.15□□□□□ -1.27
CSMD2-201ENST00000241312 TSPY1Q01534 308 aa7.15□□□□□ -1.27
CSMD2-201ENST00000241312 TAP1Q03518 808 aa7.15□□□□□ -1.27
CSMD2-201ENST00000241312 CCDC85BQ15834 202 aaPredicted RBP7.15□□□□□ -1.27
CSMD2-201ENST00000241312 RABGAP1LQ5R372 815 aa7.15□□□□□ -1.27
CSMD2-201ENST00000241312 TEX9Q8N6V9 391 aa7.15□□□□□ -1.27
CSMD2-201ENST00000241312 PPM1NQ8N819 430 aa7.15□□□□□ -1.27
CSMD2-201ENST00000241312 ACAP3Q96P50 834 aa7.15□□□□□ -1.27
CSMD2-201ENST00000241312 BHMT2Q9H2M3 363 aa7.15□□□□□ -1.27
CSMD2-201ENST00000241312 CNOT8Q9UFF9 292 aaKnown RBP7.15□□□□□ -1.27
CSMD2-201ENST00000241312 RANBP1P43487 201 aa7.15□□□□□ -1.27
CSMD2-201ENST00000241312 PMS1P54277 932 aaKnown RBP7.15□□□□□ -1.27
CSMD2-201ENST00000241312 COASYQ13057 564 aa7.15□□□□□ -1.27
CSMD2-201ENST00000241312 FAM160B2Q86V87 743 aa7.15□□□□□ -1.27
CSMD2-201ENST00000241312 TNIP2Q8NFZ5 429 aa7.15□□□□□ -1.27
CSMD2-201ENST00000241312 GID8Q9NWU2 228 aa7.15□□□□□ -1.27
CSMD2-201ENST00000241312 AURKCQ9UQB9 309 aa7.15□□□□□ -1.27
CSMD2-201ENST00000241312 GNL1P36915 607 aaPredicted RBP7.15□□□□□ -1.27
CSMD2-201ENST00000241312 UBXN2AP68543 259 aa7.15□□□□□ -1.27
CSMD2-201ENST00000241312 CDR2LQ86X02 465 aaPredicted RBP7.15□□□□□ -1.27
CSMD2-201ENST00000241312 VPS11Q9H270 941 aa7.15□□□□□ -1.27
CSMD2-201ENST00000241312 HSPA9P38646 679 aaKnown RBP7.14□□□□□ -1.27
CSMD2-201ENST00000241312 ACTN3Q08043 901 aaPredicted RBP7.14□□□□□ -1.27
CSMD2-201ENST00000241312 PDXDC2PQ6P474 469 aa7.14□□□□□ -1.27
CSMD2-201ENST00000241312 ZBTB33Q86T24 672 aa7.14□□□□□ -1.27
CSMD2-201ENST00000241312 GANCQ8TET4 914 aa7.14□□□□□ -1.27
CSMD2-201ENST00000241312 AIFM3Q96NN9 605 aa7.14□□□□□ -1.27
CSMD2-201ENST00000241312 EGFL8Q99944 293 aa7.14□□□□□ -1.27
CSMD2-201ENST00000241312 MYH11P35749 1972 aa7.14□□□□□ -1.27
CSMD2-201ENST00000241312 ADGRL3Q9HAR2 1447 aa7.14□□□□□ -1.27
CSMD2-201ENST00000241312 HSPA1AP0DMV8 641 aaKnown RBP7.14□□□□□ -1.27
CSMD2-201ENST00000241312 HSPA1BP0DMV9 641 aaKnown RBP7.14□□□□□ -1.27
CSMD2-201ENST00000241312 AASDHQ4L235 1098 aaPredicted RBP7.14□□□□□ -1.27
CSMD2-201ENST00000241312 DAB2IPQ5VWQ8 1189 aa7.14□□□□□ -1.27
CSMD2-201ENST00000241312 LRIG3Q6UXM1 1119 aa7.14□□□□□ -1.27
CSMD2-201ENST00000241312 TCP11X1B4DZS4 312 aa7.14□□□□□ -1.27
CSMD2-201ENST00000241312 APOL1O14791 398 aa7.14□□□□□ -1.27
CSMD2-201ENST00000241312 ZBTB5O15062 677 aa7.14□□□□□ -1.27
CSMD2-201ENST00000241312 ZSCAN9O15535 394 aaPredicted RBP7.14□□□□□ -1.27
CSMD2-201ENST00000241312 PHKG2P15735 406 aa7.14□□□□□ -1.27
CSMD2-201ENST00000241312 RASGRF1Q13972 1273 aa7.14□□□□□ -1.27
CSMD2-201ENST00000241312 PHF21AQ96BD5 680 aa7.14□□□□□ -1.27
CSMD2-201ENST00000241312 ALKBH8Q96BT7 664 aaKnown RBP7.14□□□□□ -1.27
CSMD2-201ENST00000241312 IFT43Q96FT9 208 aa7.14□□□□□ -1.27
CSMD2-201ENST00000241312 TSPAN17Q96FV3 270 aa7.14□□□□□ -1.27
CSMD2-201ENST00000241312 C10orf88Q9H8K7 445 aa7.14□□□□□ -1.27
CSMD2-201ENST00000241312 CYP4F11Q9HBI6 524 aa7.14□□□□□ -1.27
CSMD2-201ENST00000241312 CPSF1Q10570 1443 aaKnown RBP7.14□□□□□ -1.27
CSMD2-201ENST00000241312 LARGE1O95461 756 aa7.14□□□□□ -1.27
CSMD2-201ENST00000241312 AGTP01019 485 aa7.14□□□□□ -1.27
CSMD2-201ENST00000241312 KCNJ6P48051 423 aa7.14□□□□□ -1.27
CSMD2-201ENST00000241312 RUNX1T1Q06455 604 aa7.14□□□□□ -1.27
CSMD2-201ENST00000241312 TRADDQ15628 312 aa7.14□□□□□ -1.27
CSMD2-201ENST00000241312 DDIASQ8IXT1 998 aa7.14□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms