RNA–Protein interactions for RNA: ENST00000235349.5

PRAMEF4-201, Transcript of PRAME family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRAMEF4, Length 1,828 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF4-201ENST00000235349 EDN1P05305 212 aa11.09□□□□□ -0.63
PRAMEF4-201ENST00000235349 C6orf222P0C671 652 aaPredicted RBP11.09□□□□□ -0.63
PRAMEF4-201ENST00000235349 HSPA6P17066 643 aa11.09□□□□□ -0.63
PRAMEF4-201ENST00000235349 MTIF2P46199 727 aaKnown RBP11.09□□□□□ -0.63
PRAMEF4-201ENST00000235349 PSEN2P49810 448 aa11.09□□□□□ -0.63
PRAMEF4-201ENST00000235349 CPT1AP50416 773 aa11.09□□□□□ -0.63
PRAMEF4-201ENST00000235349 CYP2J2P51589 502 aa11.09□□□□□ -0.63
PRAMEF4-201ENST00000235349 GJA9P57773 515 aa11.09□□□□□ -0.63
PRAMEF4-201ENST00000235349 PPFIA1Q13136 1202 aa11.09□□□□□ -0.63
PRAMEF4-201ENST00000235349 GRIK4Q16099 956 aa11.09□□□□□ -0.63
PRAMEF4-201ENST00000235349 GNASQ5JWF2 1037 aa11.09□□□□□ -0.63
PRAMEF4-201ENST00000235349 MIIPQ5JXC2 388 aa11.09□□□□□ -0.63
PRAMEF4-201ENST00000235349 MTHFD1LQ6UB35 978 aa11.09□□□□□ -0.63
PRAMEF4-201ENST00000235349 PPP4R3CPQ6ZMV5 832 aa11.09□□□□□ -0.63
PRAMEF4-201ENST00000235349 STXBP4Q6ZWJ1 553 aa11.09□□□□□ -0.63
PRAMEF4-201ENST00000235349 VSTM4Q8IW00 320 aa11.09□□□□□ -0.63
PRAMEF4-201ENST00000235349 GBP3Q9H0R5 595 aa11.09□□□□□ -0.63
PRAMEF4-201ENST00000235349 TMX1Q9H3N1 280 aa11.09□□□□□ -0.63
PRAMEF4-201ENST00000235349 PCIF1Q9H4Z3 704 aa11.09□□□□□ -0.63
PRAMEF4-201ENST00000235349 AGPAT3Q9NRZ7 376 aa11.09□□□□□ -0.63
PRAMEF4-201ENST00000235349 DMAC2Q9NW81 257 aa11.09□□□□□ -0.63
PRAMEF4-201ENST00000235349 SAGE1Q9NXZ1 904 aa11.09□□□□□ -0.63
PRAMEF4-201ENST00000235349 PSD3Q9NYI0 1048 aa11.09□□□□□ -0.63
PRAMEF4-201ENST00000235349 CWC15Q9P013 229 aaKnown RBP11.09□□□□□ -0.63
PRAMEF4-201ENST00000235349 ARHGAP28Q9P2N2 729 aa11.09□□□□□ -0.63
PRAMEF4-201ENST00000235349 PPME1Q9Y570 386 aa11.09□□□□□ -0.63
PRAMEF4-201ENST00000235349 UBE4BO95155 1302 aa11.09□□□□□ -0.63
PRAMEF4-201ENST00000235349 SCN10AQ9Y5Y9 1956 aa11.08□□□□□ -0.64
PRAMEF4-201ENST00000235349 TTLL13PA6NNM8 815 aa11.08□□□□□ -0.64
PRAMEF4-201ENST00000235349 HAS3O00219 553 aa11.08□□□□□ -0.64
PRAMEF4-201ENST00000235349 TADA3O75528 432 aa11.08□□□□□ -0.64
PRAMEF4-201ENST00000235349 AKAP3O75969 853 aa11.08□□□□□ -0.64
PRAMEF4-201ENST00000235349 FGFR1OPO95684 399 aaKnown RBP11.08□□□□□ -0.64
PRAMEF4-201ENST00000235349 F2P00734 622 aa11.08□□□□□ -0.64
PRAMEF4-201ENST00000235349 SMIM10L2AP0DMW4 78 aa11.08□□□□□ -0.64
PRAMEF4-201ENST00000235349 SMIM10L2BP0DMW5 78 aa11.08□□□□□ -0.64
PRAMEF4-201ENST00000235349 ZNF200P98182 395 aaPredicted RBP11.08□□□□□ -0.64
PRAMEF4-201ENST00000235349 SPAG1Q07617 926 aa11.08□□□□□ -0.64
PRAMEF4-201ENST00000235349 ALCAMQ13740 583 aa11.08□□□□□ -0.64
PRAMEF4-201ENST00000235349 TUBB2AQ13885 445 aa11.08□□□□□ -0.64
PRAMEF4-201ENST00000235349 MFSD10Q14728 455 aa11.08□□□□□ -0.64
PRAMEF4-201ENST00000235349 MAP3K21Q5TCX8 1036 aa11.08□□□□□ -0.64
PRAMEF4-201ENST00000235349 SLC39A4Q6P5W5 647 aa11.08□□□□□ -0.64
PRAMEF4-201ENST00000235349 RHPN2Q8IUC4 686 aa11.08□□□□□ -0.64
PRAMEF4-201ENST00000235349 FAM114A1Q8IWE2 563 aa11.08□□□□□ -0.64
PRAMEF4-201ENST00000235349 LINC01465Q8N7H1 131 aa11.08□□□□□ -0.64
PRAMEF4-201ENST00000235349 CEP63Q96MT8 703 aa11.08□□□□□ -0.64
PRAMEF4-201ENST00000235349 CTAGE1Q96RT6 745 aa11.08□□□□□ -0.64
PRAMEF4-201ENST00000235349 CBWD1Q9BRT8 395 aa11.08□□□□□ -0.64
PRAMEF4-201ENST00000235349 TUBB2BQ9BVA1 445 aa11.08□□□□□ -0.64
PRAMEF4-201ENST00000235349 NOL12Q9UGY1 213 aaKnown RBP eCLIP11.08□□□□□ -0.64
PRAMEF4-201ENST00000235349 SIP14410 1827 aa11.08□□□□□ -0.64
PRAMEF4-201ENST00000235349 PES1O00541 588 aaKnown RBP11.07□□□□□ -0.64
PRAMEF4-201ENST00000235349 ARHGAP6O43182 974 aa11.07□□□□□ -0.64
PRAMEF4-201ENST00000235349 HMGCRP04035 888 aa11.07□□□□□ -0.64
PRAMEF4-201ENST00000235349 ADSSP30520 456 aa11.07□□□□□ -0.64
PRAMEF4-201ENST00000235349 PBX1P40424 430 aa11.07□□□□□ -0.64
PRAMEF4-201ENST00000235349 NAMPTP43490 491 aa11.07□□□□□ -0.64
PRAMEF4-201ENST00000235349 PLA2G4AP47712 749 aa11.07□□□□□ -0.64
PRAMEF4-201ENST00000235349 PURAQ00577 322 aaKnown RBP11.07□□□□□ -0.64
PRAMEF4-201ENST00000235349 UBXN1Q04323 297 aa11.07□□□□□ -0.64
PRAMEF4-201ENST00000235349 GOLGA8FQ08AF8 430 aa11.07□□□□□ -0.64
PRAMEF4-201ENST00000235349 GOLGA8DPQ0D2H9 430 aa11.07□□□□□ -0.64
PRAMEF4-201ENST00000235349 FILIP1LQ4L180 1135 aa11.07□□□□□ -0.64
PRAMEF4-201ENST00000235349 HS2ST1Q7LGA3 356 aa11.07□□□□□ -0.64
PRAMEF4-201ENST00000235349 MAP4K3Q8IVH8 894 aa11.07□□□□□ -0.64
PRAMEF4-201ENST00000235349 RNF149Q8NC42 400 aa11.07□□□□□ -0.64
PRAMEF4-201ENST00000235349 LMBR1Q8WVP7 490 aa11.07□□□□□ -0.64
PRAMEF4-201ENST00000235349 TCP11Q8WWU5 503 aa11.07□□□□□ -0.64
PRAMEF4-201ENST00000235349 PSPC1Q8WXF1 523 aaKnown RBP11.07□□□□□ -0.64
PRAMEF4-201ENST00000235349 BORCS6Q96GS4 357 aa11.07□□□□□ -0.64
PRAMEF4-201ENST00000235349 PPP1R16BQ96T49 567 aa11.07□□□□□ -0.64
PRAMEF4-201ENST00000235349 NOC4LQ9BVI4 516 aaKnown RBP11.07□□□□□ -0.64
PRAMEF4-201ENST00000235349 UPF3AQ9H1J1 476 aaKnown RBP11.07□□□□□ -0.64
PRAMEF4-201ENST00000235349 TMEM206Q9H813 350 aa11.07□□□□□ -0.64
PRAMEF4-201ENST00000235349 TRIM17Q9Y577 477 aa11.07□□□□□ -0.64
PRAMEF4-201ENST00000235349 PTCH2Q9Y6C5 1203 aa11.07□□□□□ -0.64
PRAMEF4-201ENST00000235349 ERICH4A6NGS2 130 aa11.07□□□□□ -0.64
PRAMEF4-201ENST00000235349 LGALS16A8MUM7 142 aa11.07□□□□□ -0.64
PRAMEF4-201ENST00000235349 K7ERI5 159 aa11.07□□□□□ -0.64
PRAMEF4-201ENST00000235349 ADAMTS4O75173 837 aa11.07□□□□□ -0.64
PRAMEF4-201ENST00000235349 CSDE1O75534 798 aaKnown RBP11.07□□□□□ -0.64
PRAMEF4-201ENST00000235349 GNRH1P01148 92 aa11.07□□□□□ -0.64
PRAMEF4-201ENST00000235349 VTNP04004 478 aa11.07□□□□□ -0.64
PRAMEF4-201ENST00000235349 MYCNP04198 464 aaPredicted RBP11.07□□□□□ -0.64
PRAMEF4-201ENST00000235349 RARBP10826 455 aa11.07□□□□□ -0.64
PRAMEF4-201ENST00000235349 MAP2K1Q02750 393 aaPredicted RBP11.07□□□□□ -0.64
PRAMEF4-201ENST00000235349 PPP2R5AQ15172 486 aa11.07□□□□□ -0.64
PRAMEF4-201ENST00000235349 NFIL3Q16649 462 aa11.07□□□□□ -0.64
PRAMEF4-201ENST00000235349 CCDC40Q4G0X9 1142 aa11.07□□□□□ -0.64
PRAMEF4-201ENST00000235349 BRDTQ58F21 947 aaPredicted RBP11.07□□□□□ -0.64
PRAMEF4-201ENST00000235349 CXCL17Q6UXB2 119 aa11.07□□□□□ -0.64
PRAMEF4-201ENST00000235349 TRIM59Q8IWR1 403 aa11.07□□□□□ -0.64
PRAMEF4-201ENST00000235349 EXOC8Q8IYI6 725 aa11.07□□□□□ -0.64
PRAMEF4-201ENST00000235349 KIAA0319LQ8IZA0 1049 aa11.07□□□□□ -0.64
PRAMEF4-201ENST00000235349 CCDC155Q8N6L0 562 aa11.07□□□□□ -0.64
PRAMEF4-201ENST00000235349 DNAJC5GQ8N7S2 189 aa11.07□□□□□ -0.64
PRAMEF4-201ENST00000235349 RDH13Q8NBN7 331 aa11.07□□□□□ -0.64
PRAMEF4-201ENST00000235349 SLC17A8Q8NDX2 589 aa11.07□□□□□ -0.64
PRAMEF4-201ENST00000235349 ANKRD20A12PQ8NF67 263 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms