RNA–Protein interactions for RNA: ENST00000223398.10

CLIP2-201, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLIP2, Length 5,563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-201ENST00000223398 HSPA6P17066 643 aa19.7■□□□□ 0.74
CLIP2-201ENST00000223398 NAALADL2Q58DX5 795 aa19.7■□□□□ 0.74
CLIP2-201ENST00000223398 YAF2Q8IY57 180 aa19.7■□□□□ 0.74
CLIP2-201ENST00000223398 TACO1Q9BSH4 297 aaKnown RBP19.7■□□□□ 0.74
CLIP2-201ENST00000223398 MMTAG2Q9BU76 263 aaKnown RBP19.7■□□□□ 0.74
CLIP2-201ENST00000223398 MTFR1LQ9H019 292 aa19.7■□□□□ 0.74
CLIP2-201ENST00000223398 TFRCP02786 760 aaKnown RBP19.7■□□□□ 0.74
CLIP2-201ENST00000223398 CCHCR1Q8TD31 782 aa19.7■□□□□ 0.74
CLIP2-201ENST00000223398 ACSL3O95573 720 aa19.7■□□□□ 0.74
CLIP2-201ENST00000223398 SLC25A27O95847 323 aa19.7■□□□□ 0.74
CLIP2-201ENST00000223398 TSR3Q9UJK0 312 aaKnown RBP19.7■□□□□ 0.74
CLIP2-201ENST00000223398 PLS3P13797 630 aa19.69■□□□□ 0.74
CLIP2-201ENST00000223398 IER5Q5VY09 327 aa19.69■□□□□ 0.74
CLIP2-201ENST00000223398 CC2D1AQ6P1N0 951 aaPredicted RBP19.69■□□□□ 0.74
CLIP2-201ENST00000223398 SPATA2LQ8IUW3 424 aaPredicted RBP19.69■□□□□ 0.74
CLIP2-201ENST00000223398 SCYL3Q8IZE3 742 aa19.69■□□□□ 0.74
CLIP2-201ENST00000223398 KLC2Q9H0B6 622 aa19.69■□□□□ 0.74
CLIP2-201ENST00000223398 MTIF3Q9H2K0 278 aaKnown RBP19.69■□□□□ 0.74
CLIP2-201ENST00000223398 DHX35Q9H5Z1 703 aaKnown RBP19.69■□□□□ 0.74
CLIP2-201ENST00000223398 JMJD4Q9H9V9 463 aa19.69■□□□□ 0.74
CLIP2-201ENST00000223398 DGAT1O75907 488 aa19.69■□□□□ 0.74
CLIP2-201ENST00000223398 EPHB4P54760 987 aa19.69■□□□□ 0.74
CLIP2-201ENST00000223398 PRKCEQ02156 737 aa19.69■□□□□ 0.74
CLIP2-201ENST00000223398 FOXD4Q12950 439 aaPredicted RBP19.69■□□□□ 0.74
CLIP2-201ENST00000223398 ZNF211Q13398 564 aaPredicted RBP19.69■□□□□ 0.74
CLIP2-201ENST00000223398 RABGGTAQ92696 567 aa19.69■□□□□ 0.74
CLIP2-201ENST00000223398 GPR75-ASB3A0A0A6YYF3 556 aa19.69■□□□□ 0.74
CLIP2-201ENST00000223398 CASQ2O14958 399 aaPredicted RBP19.69■□□□□ 0.74
CLIP2-201ENST00000223398 SART1O43290 800 aaKnown RBP19.69■□□□□ 0.74
CLIP2-201ENST00000223398 EPHX2P34913 555 aa19.69■□□□□ 0.74
CLIP2-201ENST00000223398 CFAP61Q8NHU2 1237 aa19.69■□□□□ 0.74
CLIP2-201ENST00000223398 ZNF564Q8TBZ8 553 aaPredicted RBP19.69■□□□□ 0.74
CLIP2-201ENST00000223398 BCAP29Q9UHQ4 241 aa19.69■□□□□ 0.74
CLIP2-201ENST00000223398 TTC7AQ9ULT0 858 aaPredicted RBP19.69■□□□□ 0.74
CLIP2-201ENST00000223398 SETBP1Q9Y6X0 1596 aa19.69■□□□□ 0.74
CLIP2-201ENST00000223398 CYP2C9P11712 490 aa19.69■□□□□ 0.74
CLIP2-201ENST00000223398 FBXL13Q8NEE6 735 aa19.69■□□□□ 0.74
CLIP2-201ENST00000223398 SRGAP2O75044 1071 aa19.68■□□□□ 0.74
CLIP2-201ENST00000223398 FTLP02792 175 aaPredicted RBP19.68■□□□□ 0.74
CLIP2-201ENST00000223398 TAAR1Q96RJ0 339 aa19.68■□□□□ 0.74
CLIP2-201ENST00000223398 APOEP02649 317 aa19.68■□□□□ 0.74
CLIP2-201ENST00000223398 EMC2Q15006 297 aa19.68■□□□□ 0.74
CLIP2-201ENST00000223398 TMCO4Q5TGY1 634 aa19.68■□□□□ 0.74
CLIP2-201ENST00000223398 SP110Q9HB58 689 aa19.68■□□□□ 0.74
CLIP2-201ENST00000223398 SARS2Q9NP81 518 aaKnown RBP19.68■□□□□ 0.74
CLIP2-201ENST00000223398 ABHD10Q9NUJ1 306 aa19.68■□□□□ 0.74
CLIP2-201ENST00000223398 FAM8A1Q9UBU6 413 aa19.68■□□□□ 0.74
CLIP2-201ENST00000223398 COG7P83436 770 aa19.68■□□□□ 0.74
CLIP2-201ENST00000223398 RNF217Q8TC41 542 aa19.68■□□□□ 0.74
CLIP2-201ENST00000223398 RBM41Q96IZ5 413 aaKnown RBP19.68■□□□□ 0.74
CLIP2-201ENST00000223398 DONSONQ9NYP3 566 aa19.68■□□□□ 0.74
CLIP2-201ENST00000223398 PDGFRBP09619 1106 aa19.68■□□□□ 0.74
CLIP2-201ENST00000223398 KCNA4P22459 653 aa19.68■□□□□ 0.74
CLIP2-201ENST00000223398 AP1B1Q10567 949 aa19.68■□□□□ 0.74
CLIP2-201ENST00000223398 DBN1Q16643 649 aa19.68■□□□□ 0.74
CLIP2-201ENST00000223398 CENPUQ71F23 418 aa19.68■□□□□ 0.74
CLIP2-201ENST00000223398 BCAS4Q8TDM0 211 aa19.68■□□□□ 0.74
CLIP2-201ENST00000223398 PHF20Q9BVI0 1012 aa19.68■□□□□ 0.74
CLIP2-201ENST00000223398 RIMS1Q86UR5 1692 aaKnown RBP19.68■□□□□ 0.74
CLIP2-201ENST00000223398 PFASO15067 1338 aa19.68■□□□□ 0.74
CLIP2-201ENST00000223398 HMBSP08397 361 aa19.68■□□□□ 0.74
CLIP2-201ENST00000223398 PPARGP37231 505 aaPredicted RBP19.68■□□□□ 0.74
CLIP2-201ENST00000223398 TFDP2Q14188 446 aa19.68■□□□□ 0.74
CLIP2-201ENST00000223398 ACER1Q8TDN7 264 aa19.68■□□□□ 0.74
CLIP2-201ENST00000223398 NFIAQ12857 509 aa19.67■□□□□ 0.74
CLIP2-201ENST00000223398 EFHC2Q5JST6 749 aa19.67■□□□□ 0.74
CLIP2-201ENST00000223398 GUF1Q8N442 669 aaKnown RBP19.67■□□□□ 0.74
CLIP2-201ENST00000223398 SPATA17Q96L03 361 aa19.67■□□□□ 0.74
CLIP2-201ENST00000223398 SAYSD1Q9NPB0 183 aa19.67■□□□□ 0.74
CLIP2-201ENST00000223398 TRAPPC3O43617 180 aa19.67■□□□□ 0.74
CLIP2-201ENST00000223398 FCGRTP55899 365 aa19.67■□□□□ 0.74
CLIP2-201ENST00000223398 TSNAXIP1Q2TAA8 658 aa19.67■□□□□ 0.74
CLIP2-201ENST00000223398 HSPBP1Q9NZL4 362 aa19.67■□□□□ 0.74
CLIP2-201ENST00000223398 SESN3P58005 492 aa19.67■□□□□ 0.74
CLIP2-201ENST00000223398 MXD4Q14582 209 aaPredicted RBP19.67■□□□□ 0.74
CLIP2-201ENST00000223398 REEP2Q9BRK0 252 aa19.67■□□□□ 0.74
CLIP2-201ENST00000223398 KPNA2P52292 529 aaKnown RBP19.67■□□□□ 0.74
CLIP2-201ENST00000223398 EFCAB12Q6NXP0 572 aa19.67■□□□□ 0.74
CLIP2-201ENST00000223398 TRIM67Q6ZTA4 783 aa19.67■□□□□ 0.74
CLIP2-201ENST00000223398 PI4K2BG5E9Z4 385 aa19.66■□□□□ 0.74
CLIP2-201ENST00000223398 GTF2A2P52657 109 aa19.66■□□□□ 0.74
CLIP2-201ENST00000223398 APPL2Q8NEU8 664 aa19.66■□□□□ 0.74
CLIP2-201ENST00000223398 SNX24Q9Y343 169 aa19.66■□□□□ 0.74
CLIP2-201ENST00000223398 STXBP3O00186 592 aa19.66■□□□□ 0.74
CLIP2-201ENST00000223398 RALAP11233 206 aa19.66■□□□□ 0.74
CLIP2-201ENST00000223398 RGS7P49802 495 aa19.66■□□□□ 0.74
CLIP2-201ENST00000223398 NBPF9Q3BBW0 867 aa19.66■□□□□ 0.74
CLIP2-201ENST00000223398 LMNTD2Q8IXW0 634 aa19.66■□□□□ 0.74
CLIP2-201ENST00000223398 RNF10Q8N5U6 811 aaKnown RBP19.66■□□□□ 0.74
CLIP2-201ENST00000223398 ASIC4Q96FT7 647 aa19.66■□□□□ 0.74
CLIP2-201ENST00000223398 FMO2Q99518 471 aa19.66■□□□□ 0.74
CLIP2-201ENST00000223398 DFFAO00273 331 aa19.66■□□□□ 0.74
CLIP2-201ENST00000223398 CYP26A1O43174 497 aa19.66■□□□□ 0.74
CLIP2-201ENST00000223398 ANKRD40Q6AI12 368 aa19.66■□□□□ 0.74
CLIP2-201ENST00000223398 PGBD4Q96DM1 585 aa19.66■□□□□ 0.74
CLIP2-201ENST00000223398 ZNF512BQ96KM6 892 aaPredicted RBP19.66■□□□□ 0.74
CLIP2-201ENST00000223398 ADARB2Q9NS39 739 aaKnown RBP19.66■□□□□ 0.74
CLIP2-201ENST00000223398 TEX33O43247 280 aa19.66■□□□□ 0.74
CLIP2-201ENST00000223398 ZNF500O60304 480 aaPredicted RBP19.66■□□□□ 0.74
CLIP2-201ENST00000223398 RPS6P62753 249 aaKnown RBP19.66■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms