RNA–Protein interactions for RNA: ENSMUST00000106035.7

Ccdc28b-202, Transcript of Coiled-coil domain-containing protein 28B, mousemouse

TSL 1 (best) BASIC

Gene Ccdc28b, Length 821 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28b-202ENSMUST00000106035 Lrrc66Q8K0B3 872 aa13.51□□□□□ -0.25
Ccdc28b-202ENSMUST00000106035 Phldb2Q8K1N2 1249 aa13.51□□□□□ -0.25
Ccdc28b-202ENSMUST00000106035 Ccdc71Q8VEG0 433 aa13.51□□□□□ -0.25
Ccdc28b-202ENSMUST00000106035 Trub2Q91WG3 331 aaKnown RBP13.51□□□□□ -0.25
Ccdc28b-202ENSMUST00000106035 Ino80bQ99PT3 375 aaKnown RBP13.51□□□□□ -0.25
Ccdc28b-202ENSMUST00000106035 Smyd3Q9CWR2 428 aa13.51□□□□□ -0.25
Ccdc28b-202ENSMUST00000106035 Pla2g2fQ9QZT4 168 aa13.51□□□□□ -0.25
Ccdc28b-202ENSMUST00000106035 TfebQ9R210 475 aa13.51□□□□□ -0.25
Ccdc28b-202ENSMUST00000106035 Plin4O88492 1403 aa13.5□□□□□ -0.25
Ccdc28b-202ENSMUST00000106035 Gm45713A0A1B0GS68 446 aa13.5□□□□□ -0.25
Ccdc28b-202ENSMUST00000106035 Slc6a16A0A1L1SR47 742 aa13.5□□□□□ -0.25
Ccdc28b-202ENSMUST00000106035 Lmod3E9QA62 571 aa13.5□□□□□ -0.25
Ccdc28b-202ENSMUST00000106035 Gm21969J3QJZ1 289 aa13.5□□□□□ -0.25
Ccdc28b-202ENSMUST00000106035 Vmn2r78K7N6U5 853 aa13.5□□□□□ -0.25
Ccdc28b-202ENSMUST00000106035 Defa-rs2P17534 91 aa13.5□□□□□ -0.25
Ccdc28b-202ENSMUST00000106035 Aimp1P31230 310 aaKnown RBP13.5□□□□□ -0.25
Ccdc28b-202ENSMUST00000106035 Cd68P31996 326 aa13.5□□□□□ -0.25
Ccdc28b-202ENSMUST00000106035 Adcyap1r1P70205 496 aa13.5□□□□□ -0.25
Ccdc28b-202ENSMUST00000106035 Myadml2Q08AU7 307 aa13.5□□□□□ -0.25
Ccdc28b-202ENSMUST00000106035 Gtf2f1Q3THK3 508 aaKnown RBP13.5□□□□□ -0.25
Ccdc28b-202ENSMUST00000106035 Olfml2bQ3V1G4 746 aa13.5□□□□□ -0.25
Ccdc28b-202ENSMUST00000106035 MaeaQ4VC33 396 aa13.5□□□□□ -0.25
Ccdc28b-202ENSMUST00000106035 Tcf12Q61286 706 aa13.5□□□□□ -0.25
Ccdc28b-202ENSMUST00000106035 Cd180Q62192 661 aa13.5□□□□□ -0.25
Ccdc28b-202ENSMUST00000106035 Akap7Q7TN79 314 aa13.5□□□□□ -0.25
Ccdc28b-202ENSMUST00000106035 FgbQ8K0E8 481 aa13.5□□□□□ -0.25
Ccdc28b-202ENSMUST00000106035 Kdm4cQ8VCD7 1054 aa13.5□□□□□ -0.25
Ccdc28b-202ENSMUST00000106035 Uhrf1Q8VDF2 782 aaKnown RBP13.5□□□□□ -0.25
Ccdc28b-202ENSMUST00000106035 Olfr532Q8VGT4 309 aa13.5□□□□□ -0.25
Ccdc28b-202ENSMUST00000106035 Csde1Q91W50 798 aaKnown RBP13.5□□□□□ -0.25
Ccdc28b-202ENSMUST00000106035 Tnpo2Q99LG2 887 aaKnown RBP13.5□□□□□ -0.25
Ccdc28b-202ENSMUST00000106035 Smc1aQ9CU62 1233 aaKnown RBP13.5□□□□□ -0.25
Ccdc28b-202ENSMUST00000106035 Noa1Q9JJG9 693 aaKnown RBP13.5□□□□□ -0.25
Ccdc28b-202ENSMUST00000106035 Hic2Q9JLZ6 619 aaKnown RBP13.5□□□□□ -0.25
Ccdc28b-202ENSMUST00000106035 Akr1c19G3X9Y6 323 aa13.49□□□□□ -0.25
Ccdc28b-202ENSMUST00000106035 TertO70372 1122 aa13.49□□□□□ -0.25
Ccdc28b-202ENSMUST00000106035 DgkaO88673 730 aa13.49□□□□□ -0.25
Ccdc28b-202ENSMUST00000106035 Hoxb8P09632 243 aa13.49□□□□□ -0.25
Ccdc28b-202ENSMUST00000106035 Adcy6Q01341 1165 aa13.49□□□□□ -0.25
Ccdc28b-202ENSMUST00000106035 Tgfbrap1Q3UR70 860 aa13.49□□□□□ -0.25
Ccdc28b-202ENSMUST00000106035 DeptorQ570Y9 409 aa13.49□□□□□ -0.25
Ccdc28b-202ENSMUST00000106035 IgflQ6B9Z0 140 aa13.49□□□□□ -0.25
Ccdc28b-202ENSMUST00000106035 Tmem260Q8BMD6 703 aa13.49□□□□□ -0.25
Ccdc28b-202ENSMUST00000106035 Zfp317Q8C0Q5 607 aa13.49□□□□□ -0.25
Ccdc28b-202ENSMUST00000106035 Zfp113Q8C689 439 aa13.49□□□□□ -0.25
Ccdc28b-202ENSMUST00000106035 RtknQ8C6B2 564 aa13.49□□□□□ -0.25
Ccdc28b-202ENSMUST00000106035 Inpp5fQ8CDA1 1132 aa13.49□□□□□ -0.25
Ccdc28b-202ENSMUST00000106035 Tada3Q8R0L9 432 aa13.49□□□□□ -0.25
Ccdc28b-202ENSMUST00000106035 Kri1Q8VDQ9 704 aaKnown RBP13.49□□□□□ -0.25
Ccdc28b-202ENSMUST00000106035 Noxred1Q9D3S5 366 aa13.49□□□□□ -0.25
Ccdc28b-202ENSMUST00000106035 Kcnq4Q9JK97 696 aa13.49□□□□□ -0.25
Ccdc28b-202ENSMUST00000106035 B4galt5Q9JMK0 388 aa13.49□□□□□ -0.25
Ccdc28b-202ENSMUST00000106035 Ttc3O88196 1979 aaKnown RBP13.49□□□□□ -0.25
Ccdc28b-202ENSMUST00000106035 ThadaA8C756 1938 aa13.49□□□□□ -0.25
Ccdc28b-202ENSMUST00000106035 Gm45194A0A140LJG2 572 aa13.48□□□□□ -0.25
Ccdc28b-202ENSMUST00000106035 Gm13084A2A8N0 494 aa13.48□□□□□ -0.25
Ccdc28b-202ENSMUST00000106035 1700001O22RikA2APZ1 375 aa13.48□□□□□ -0.25
Ccdc28b-202ENSMUST00000106035 Pbx3O35317 434 aa13.48□□□□□ -0.25
Ccdc28b-202ENSMUST00000106035 Ap1b1O35643 943 aaKnown RBP13.48□□□□□ -0.25
Ccdc28b-202ENSMUST00000106035 PrnpP04925 254 aa13.48□□□□□ -0.25
Ccdc28b-202ENSMUST00000106035 PrkcbP68404 671 aa13.48□□□□□ -0.25
Ccdc28b-202ENSMUST00000106035 EnahQ03173 802 aa13.48□□□□□ -0.25
Ccdc28b-202ENSMUST00000106035 Prpf4bQ61136 1007 aaKnown RBP13.48□□□□□ -0.25
Ccdc28b-202ENSMUST00000106035 Bcar1Q61140 874 aa13.48□□□□□ -0.25
Ccdc28b-202ENSMUST00000106035 Armcx2Q6A058 784 aaKnown RBP13.48□□□□□ -0.25
Ccdc28b-202ENSMUST00000106035 Thap3Q8BJ25 218 aa13.48□□□□□ -0.25
Ccdc28b-202ENSMUST00000106035 PdhxQ8BKZ9 501 aa13.48□□□□□ -0.25
Ccdc28b-202ENSMUST00000106035 Vps52Q8C754 723 aaKnown RBP13.48□□□□□ -0.25
Ccdc28b-202ENSMUST00000106035 Mtnr1bQ8CIQ6 364 aa13.48□□□□□ -0.25
Ccdc28b-202ENSMUST00000106035 Fbxo18Q8K2I9 1042 aa13.48□□□□□ -0.25
Ccdc28b-202ENSMUST00000106035 PccaQ91ZA3 724 aa13.48□□□□□ -0.25
Ccdc28b-202ENSMUST00000106035 Dnajb4Q9D832 337 aa13.48□□□□□ -0.25
Ccdc28b-202ENSMUST00000106035 Rab13Q9DD03 202 aa13.48□□□□□ -0.25
Ccdc28b-202ENSMUST00000106035 AmfrQ9R049 643 aa13.48□□□□□ -0.25
Ccdc28b-202ENSMUST00000106035 Tnrc18Q80WC3 2878 aa13.47□□□□□ -0.25
Ccdc28b-202ENSMUST00000106035 Igkv17-121A0A0G2JFA8 117 aa13.47□□□□□ -0.25
Ccdc28b-202ENSMUST00000106035 Gm4907B1AXB9 411 aa13.47□□□□□ -0.25
Ccdc28b-202ENSMUST00000106035 BC049352E9Q2Z6 85 aa13.47□□□□□ -0.25
Ccdc28b-202ENSMUST00000106035 Zfp358E9Q8M1 571 aa13.47□□□□□ -0.25
Ccdc28b-202ENSMUST00000106035 Nr1i2O54915 431 aa13.47□□□□□ -0.25
Ccdc28b-202ENSMUST00000106035 Dpep1P31428 410 aa13.47□□□□□ -0.25
Ccdc28b-202ENSMUST00000106035 Nudt1P53368 156 aa13.47□□□□□ -0.25
Ccdc28b-202ENSMUST00000106035 Nrp1P97333 923 aa13.47□□□□□ -0.25
Ccdc28b-202ENSMUST00000106035 Lig3P97386 1015 aa13.47□□□□□ -0.25
Ccdc28b-202ENSMUST00000106035 Plpp4Q0VBU9 271 aa13.47□□□□□ -0.25
Ccdc28b-202ENSMUST00000106035 Gm28047Q3US59 414 aa13.47□□□□□ -0.25
Ccdc28b-202ENSMUST00000106035 Oog4Q4G0C7 502 aa13.47□□□□□ -0.25
Ccdc28b-202ENSMUST00000106035 Tmem151bQ68FE7 561 aa13.47□□□□□ -0.25
Ccdc28b-202ENSMUST00000106035 Jade1Q6ZPI0 834 aaKnown RBP13.47□□□□□ -0.25
Ccdc28b-202ENSMUST00000106035 Tspan18Q80WR1 248 aa13.47□□□□□ -0.25
Ccdc28b-202ENSMUST00000106035 Reps2Q80XA6 521 aa13.47□□□□□ -0.25
Ccdc28b-202ENSMUST00000106035 Usp1Q8BJQ2 784 aa13.47□□□□□ -0.25
Ccdc28b-202ENSMUST00000106035 PolrmtQ8BKF1 1207 aaKnown RBP13.47□□□□□ -0.25
Ccdc28b-202ENSMUST00000106035 Fam129bQ8R1F1 749 aa13.47□□□□□ -0.25
Ccdc28b-202ENSMUST00000106035 LpxnQ99N69 386 aa13.47□□□□□ -0.25
Ccdc28b-202ENSMUST00000106035 Scrn1Q9CZC8 414 aa13.47□□□□□ -0.25
Ccdc28b-202ENSMUST00000106035 Krtap5-3Q9D226 196 aa13.47□□□□□ -0.25
Ccdc28b-202ENSMUST00000106035 Fgf22Q9ESS2 162 aa13.47□□□□□ -0.25
Ccdc28b-202ENSMUST00000106035 Pex3Q9QXY9 372 aa13.47□□□□□ -0.25
Ccdc28b-202ENSMUST00000106035 Rev3lQ61493 3122 aa13.46□□□□□ -0.25
Retrieved 100 of 22,080 RNA–protein pairs in 41.8 ms