RNA–Protein interactions for RNA: ENSMUST00000093490.8

Clcn3-203, Transcript of H(+)/Cl(-) exchange transporter 3, mousemouse

APPRIS ALT1 TSL 1 (best) BASIC

Gene Clcn3, Length 5,518 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn3-203ENSMUST00000093490 Snx19Q6P4T1 997 aa16.76■□□□□ 0.27
Clcn3-203ENSMUST00000093490 TwistnbQ78WZ7 330 aaKnown RBP16.76■□□□□ 0.27
Clcn3-203ENSMUST00000093490 Zbtb5Q7TQG0 670 aa16.76■□□□□ 0.27
Clcn3-203ENSMUST00000093490 Usp8Q80U87 1080 aa16.76■□□□□ 0.27
Clcn3-203ENSMUST00000093490 BC048507Q80ZS7 89 aa16.76■□□□□ 0.27
Clcn3-203ENSMUST00000093490 Ipo5Q8BKC5 1097 aaKnown RBP16.76■□□□□ 0.27
Clcn3-203ENSMUST00000093490 Adprhl2Q8CG72 370 aa16.76■□□□□ 0.27
Clcn3-203ENSMUST00000093490 Il31raQ8K5B1 716 aa16.76■□□□□ 0.27
Clcn3-203ENSMUST00000093490 Pdia6Q922R8 440 aaKnown RBP16.76■□□□□ 0.27
Clcn3-203ENSMUST00000093490 MbipQ99LQ1 341 aa16.76■□□□□ 0.27
Clcn3-203ENSMUST00000093490 Cpb2Q9JHH6 422 aa16.76■□□□□ 0.27
Clcn3-203ENSMUST00000093490 Exoc7O35250 697 aa16.75■□□□□ 0.27
Clcn3-203ENSMUST00000093490 DffaO54786 331 aa16.75■□□□□ 0.27
Clcn3-203ENSMUST00000093490 Hps5P59438 1126 aa16.75■□□□□ 0.27
Clcn3-203ENSMUST00000093490 Ice2Q3UZ18 988 aaKnown RBP16.75■□□□□ 0.27
Clcn3-203ENSMUST00000093490 Sec23ipQ6NZC7 998 aa16.75■□□□□ 0.27
Clcn3-203ENSMUST00000093490 Ccdc154Q6RUT8 657 aa16.75■□□□□ 0.27
Clcn3-203ENSMUST00000093490 Pum3Q8BKS9 647 aaKnown RBP16.75■□□□□ 0.27
Clcn3-203ENSMUST00000093490 Haus7Q8BKT8 364 aa16.75■□□□□ 0.27
Clcn3-203ENSMUST00000093490 Rtn3Q9ES97 964 aa16.75■□□□□ 0.27
Clcn3-203ENSMUST00000093490 Fam167bP17257 162 aa16.75■□□□□ 0.27
Clcn3-203ENSMUST00000093490 NfrkbQ6PIJ4 1296 aaKnown RBP16.75■□□□□ 0.27
Clcn3-203ENSMUST00000093490 Baiap3Q80TT2 1134 aa16.75■□□□□ 0.27
Clcn3-203ENSMUST00000093490 Ulbp1Q8HWA3 334 aa16.75■□□□□ 0.27
Clcn3-203ENSMUST00000093490 NptxrQ99J85 493 aa16.75■□□□□ 0.27
Clcn3-203ENSMUST00000093490 Map3k20Q9ESL4 802 aaKnown RBP16.75■□□□□ 0.27
Clcn3-203ENSMUST00000093490 Adrm1Q9JKV1 407 aa16.75■□□□□ 0.27
Clcn3-203ENSMUST00000093490 Gm7356A0A087WSA6 508 aa16.75■□□□□ 0.27
Clcn3-203ENSMUST00000093490 Thumpd3P97770 505 aa16.75■□□□□ 0.27
Clcn3-203ENSMUST00000093490 Usp17leQ7M764 540 aa16.75■□□□□ 0.27
Clcn3-203ENSMUST00000093490 Ap2b1Q9DBG3 937 aa16.75■□□□□ 0.27
Clcn3-203ENSMUST00000093490 Prg3Q9JL95 222 aa16.75■□□□□ 0.27
Clcn3-203ENSMUST00000093490 Ifi202Q9R002 445 aa16.75■□□□□ 0.27
Clcn3-203ENSMUST00000093490 SnrpfP62307 86 aaKnown RBP16.75■□□□□ 0.27
Clcn3-203ENSMUST00000093490 Crnkl1P63154 690 aaKnown RBP16.75■□□□□ 0.27
Clcn3-203ENSMUST00000093490 G3bp2P97379 482 aaKnown RBP16.75■□□□□ 0.27
Clcn3-203ENSMUST00000093490 Serpinb6Q60854 378 aa16.75■□□□□ 0.27
Clcn3-203ENSMUST00000093490 Clec4gQ8BNX1 294 aa16.75■□□□□ 0.27
Clcn3-203ENSMUST00000093490 Slc7a14Q8BXR1 771 aa16.75■□□□□ 0.27
Clcn3-203ENSMUST00000093490 Cog4Q8R1U1 785 aa16.75■□□□□ 0.27
Clcn3-203ENSMUST00000093490 Ttc8Q8VD72 515 aa16.75■□□□□ 0.27
Clcn3-203ENSMUST00000093490 Trim66Q924W6 1242 aa16.75■□□□□ 0.27
Clcn3-203ENSMUST00000093490 Rimbp3Q3V0F0 1606 aa16.74■□□□□ 0.27
Clcn3-203ENSMUST00000093490 Gm5926E9PWJ8 236 aa16.74■□□□□ 0.27
Clcn3-203ENSMUST00000093490 Zfp266E9Q2S7 604 aa16.74■□□□□ 0.27
Clcn3-203ENSMUST00000093490 Pja1O55176 578 aa16.74■□□□□ 0.27
Clcn3-203ENSMUST00000093490 CcnoP0C242 352 aa16.74■□□□□ 0.27
Clcn3-203ENSMUST00000093490 Olfm3P63056 478 aa16.74■□□□□ 0.27
Clcn3-203ENSMUST00000093490 LnpkQ7TQ95 425 aa16.74■□□□□ 0.27
Clcn3-203ENSMUST00000093490 Fam102bQ8BQS4 339 aa16.74■□□□□ 0.27
Clcn3-203ENSMUST00000093490 Snap47Q8R570 413 aa16.74■□□□□ 0.27
Clcn3-203ENSMUST00000093490 PlvapQ91VC4 438 aa16.74■□□□□ 0.27
Clcn3-203ENSMUST00000093490 St13Q99L47 371 aaKnown RBP16.74■□□□□ 0.27
Clcn3-203ENSMUST00000093490 Tjap1Q9DCD5 539 aa16.74■□□□□ 0.27
Clcn3-203ENSMUST00000093490 Ppp2r3cQ9JK24 453 aa16.74■□□□□ 0.27
Clcn3-203ENSMUST00000093490 Psmd5Q8BJY1 504 aa16.74■□□□□ 0.27
Clcn3-203ENSMUST00000093490 Pnma1Q8C1C8 353 aa16.74■□□□□ 0.27
Clcn3-203ENSMUST00000093490 Spata17Q9D552 379 aa16.74■□□□□ 0.27
Clcn3-203ENSMUST00000093490 Rnf14Q9JI90 485 aa16.74■□□□□ 0.27
Clcn3-203ENSMUST00000093490 Rnf4Q9QZS2 194 aa16.74■□□□□ 0.27
Clcn3-203ENSMUST00000093490 Kif9Q9WV04 790 aa16.74■□□□□ 0.27
Clcn3-203ENSMUST00000093490 Nwd1A6H603 1563 aa16.74■□□□□ 0.27
Clcn3-203ENSMUST00000093490 Celf5D3Z4T1 395 aaKnown RBP16.74■□□□□ 0.27
Clcn3-203ENSMUST00000093490 Gm3893E9Q1I1 302 aa16.74■□□□□ 0.27
Clcn3-203ENSMUST00000093490 GfapP03995 430 aa16.74■□□□□ 0.27
Clcn3-203ENSMUST00000093490 CtifQ6PEE2 600 aaKnown RBP16.74■□□□□ 0.27
Clcn3-203ENSMUST00000093490 Rd3Q8BRE0 195 aa16.74■□□□□ 0.27
Clcn3-203ENSMUST00000093490 Dnajc3Q91YW3 504 aa16.74■□□□□ 0.27
Clcn3-203ENSMUST00000093490 IkbipQ9DBZ1 373 aa16.74■□□□□ 0.27
Clcn3-203ENSMUST00000093490 Zranb2Q9R020 330 aaKnown RBP16.74■□□□□ 0.27
Clcn3-203ENSMUST00000093490 Wdr46Q9Z0H1 622 aaKnown RBP16.74■□□□□ 0.27
Clcn3-203ENSMUST00000093490 Zmynd8A2A484 1235 aaKnown RBP16.74■□□□□ 0.27
Clcn3-203ENSMUST00000093490 TprnA2AI08 749 aaKnown RBP16.74■□□□□ 0.27
Clcn3-203ENSMUST00000093490 Ccdc51Q3URS9 406 aa16.74■□□□□ 0.27
Clcn3-203ENSMUST00000093490 Ino80dQ66JY2 873 aaKnown RBP16.74■□□□□ 0.27
Clcn3-203ENSMUST00000093490 Ccdc40Q8BI79 1192 aa16.74■□□□□ 0.27
Clcn3-203ENSMUST00000093490 Daam1Q8BPM0 1077 aa16.74■□□□□ 0.27
Clcn3-203ENSMUST00000093490 Ephb1Q8CBF3 984 aa16.74■□□□□ 0.27
Clcn3-203ENSMUST00000093490 Pnpt1Q8K1R3 783 aaKnown RBP16.74■□□□□ 0.27
Clcn3-203ENSMUST00000093490 Rnf123Q5XPI3 1314 aa16.74■□□□□ 0.27
Clcn3-203ENSMUST00000093490 Osbpl9A2A8Z1 736 aa16.74■□□□□ 0.27
Clcn3-203ENSMUST00000093490 Ap1g2O88512 791 aa16.74■□□□□ 0.27
Clcn3-203ENSMUST00000093490 Wdr36Q3TAQ9 899 aaKnown RBP16.74■□□□□ 0.27
Clcn3-203ENSMUST00000093490 Sec31aQ3UPL0 1230 aaKnown RBP16.74■□□□□ 0.27
Clcn3-203ENSMUST00000093490 Cyp4x1Q6A152 507 aa16.74■□□□□ 0.27
Clcn3-203ENSMUST00000093490 PrcpQ7TMR0 491 aa16.74■□□□□ 0.27
Clcn3-203ENSMUST00000093490 Ttc17E9PVB5 1198 aa16.73■□□□□ 0.27
Clcn3-203ENSMUST00000093490 Olfr552E9Q545 317 aa16.73■□□□□ 0.27
Clcn3-203ENSMUST00000093490 Pcsk1P63239 753 aa16.73■□□□□ 0.27
Clcn3-203ENSMUST00000093490 Rab3ipQ68EF0 428 aa16.73■□□□□ 0.27
Clcn3-203ENSMUST00000093490 Inpp5fQ8CDA1 1132 aa16.73■□□□□ 0.27
Clcn3-203ENSMUST00000093490 Nde1Q9CZA6 344 aa16.73■□□□□ 0.27
Clcn3-203ENSMUST00000093490 Slc40a1Q9JHI9 570 aa16.73■□□□□ 0.27
Clcn3-203ENSMUST00000093490 Anapc7Q9WVM3 565 aa16.73■□□□□ 0.27
Clcn3-203ENSMUST00000093490 Abcb11Q9QY30 1321 aa16.73■□□□□ 0.27
Clcn3-203ENSMUST00000093490 Abhd15Q5F2F2 459 aa16.73■□□□□ 0.27
Clcn3-203ENSMUST00000093490 Elp3Q9CZX0 547 aa16.73■□□□□ 0.27
Clcn3-203ENSMUST00000093490 Slc2a5Q9WV38 501 aa16.73■□□□□ 0.27
Clcn3-203ENSMUST00000093490 Apba1B2RUJ5 842 aa16.73■□□□□ 0.27
Clcn3-203ENSMUST00000093490 Eno1P17182 434 aaKnown RBP16.73■□□□□ 0.27
Retrieved 100 of 22,080 RNA–protein pairs in 16.6 ms