RNA–Protein interactions for RNA: ENSMUST00000092215.5

Ccdc38-201, Transcript of Coiled-coil domain-containing protein 38, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ccdc38, Length 3,656 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc38-201ENSMUST00000092215 Leg1Q8C6C9 337 aa10.8□□□□□ -0.68
Ccdc38-201ENSMUST00000092215 Rab3il1Q8VDV3 383 aa10.8□□□□□ -0.68
Ccdc38-201ENSMUST00000092215 Olfr805Q8VFI4 319 aa10.8□□□□□ -0.68
Ccdc38-201ENSMUST00000092215 Ppp1r3aQ99MR9 1089 aa10.8□□□□□ -0.68
Ccdc38-201ENSMUST00000092215 Abhd2Q9QXM0 425 aa10.8□□□□□ -0.68
Ccdc38-201ENSMUST00000092215 Magea10A2AMW4 325 aa10.8□□□□□ -0.68
Ccdc38-201ENSMUST00000092215 Fam129cD3YZB0 591 aa10.8□□□□□ -0.68
Ccdc38-201ENSMUST00000092215 Clca3bE9PUL3 1044 aa10.8□□□□□ -0.68
Ccdc38-201ENSMUST00000092215 Serpinb3aG3X9V8 387 aa10.8□□□□□ -0.68
Ccdc38-201ENSMUST00000092215 AfmO89020 608 aa10.8□□□□□ -0.68
Ccdc38-201ENSMUST00000092215 EpoP07321 192 aa10.8□□□□□ -0.68
Ccdc38-201ENSMUST00000092215 Calb1P12658 261 aa10.8□□□□□ -0.68
Ccdc38-201ENSMUST00000092215 EzrP26040 586 aaKnown RBP10.8□□□□□ -0.68
Ccdc38-201ENSMUST00000092215 Mmp3P28862 477 aa10.8□□□□□ -0.68
Ccdc38-201ENSMUST00000092215 Ndufs6P52503 116 aa10.8□□□□□ -0.68
Ccdc38-201ENSMUST00000092215 Arf4P61750 180 aa10.8□□□□□ -0.68
Ccdc38-201ENSMUST00000092215 Tnfaip8l3Q3TBL6 204 aa10.8□□□□□ -0.68
Ccdc38-201ENSMUST00000092215 Rapgef1Q3UHC1 1224 aa10.8□□□□□ -0.68
Ccdc38-201ENSMUST00000092215 Ush1gQ80T11 461 aa10.8□□□□□ -0.68
Ccdc38-201ENSMUST00000092215 6820408C15RikQ8BJX2 354 aa10.8□□□□□ -0.68
Ccdc38-201ENSMUST00000092215 Ccser1Q8C0C4 895 aa10.8□□□□□ -0.68
Ccdc38-201ENSMUST00000092215 Spice1Q8C804 860 aa10.8□□□□□ -0.68
Ccdc38-201ENSMUST00000092215 Adnp2Q8CHC8 1165 aaKnown RBP10.8□□□□□ -0.68
Ccdc38-201ENSMUST00000092215 Atp1a1Q8VDN2 1023 aaKnown RBP10.8□□□□□ -0.68
Ccdc38-201ENSMUST00000092215 CbsQ91WT9 561 aa10.8□□□□□ -0.68
Ccdc38-201ENSMUST00000092215 Usp29Q9ES63 869 aa10.8□□□□□ -0.68
Ccdc38-201ENSMUST00000092215 Fut2Q9JL27 347 aa10.8□□□□□ -0.68
Ccdc38-201ENSMUST00000092215 4930544D05RikJ3QK56 214 aa10.8□□□□□ -0.68
Ccdc38-201ENSMUST00000092215 Chmp6P0C0A3 200 aa10.8□□□□□ -0.68
Ccdc38-201ENSMUST00000092215 Ly6dP35459 127 aa10.8□□□□□ -0.68
Ccdc38-201ENSMUST00000092215 Mbtd1Q6P5G3 631 aa10.8□□□□□ -0.68
Ccdc38-201ENSMUST00000092215 Actn1Q7TPR4 892 aaKnown RBP10.8□□□□□ -0.68
Ccdc38-201ENSMUST00000092215 Serpina3bQ8BYY9 420 aa10.8□□□□□ -0.68
Ccdc38-201ENSMUST00000092215 Phldb2Q8K1N2 1249 aa10.8□□□□□ -0.68
Ccdc38-201ENSMUST00000092215 Plekhh3Q8VCE9 796 aa10.8□□□□□ -0.68
Ccdc38-201ENSMUST00000092215 Mageb3Q9D2H4 330 aa10.8□□□□□ -0.68
Ccdc38-201ENSMUST00000092215 Rwdd2aQ9D9S3 292 aa10.8□□□□□ -0.68
Ccdc38-201ENSMUST00000092215 DgkhD3YXJ0 1156 aa10.79□□□□□ -0.68
Ccdc38-201ENSMUST00000092215 Trim12cD3Z3L3 497 aa10.79□□□□□ -0.68
Ccdc38-201ENSMUST00000092215 Mpzl3Q3V3F6 237 aa10.79□□□□□ -0.68
Ccdc38-201ENSMUST00000092215 Ppme1Q8BVQ5 386 aa10.79□□□□□ -0.68
Ccdc38-201ENSMUST00000092215 Zswim3Q8CFL8 695 aa10.79□□□□□ -0.68
Ccdc38-201ENSMUST00000092215 Mia3Q8BI84 1930 aa10.79□□□□□ -0.68
Ccdc38-201ENSMUST00000092215 Vmn2r55G3UWZ4 781 aa10.79□□□□□ -0.68
Ccdc38-201ENSMUST00000092215 Vmn2r53L7N473 806 aa10.79□□□□□ -0.68
Ccdc38-201ENSMUST00000092215 Samsn1P57725 372 aa10.79□□□□□ -0.68
Ccdc38-201ENSMUST00000092215 EnahQ03173 802 aa10.79□□□□□ -0.68
Ccdc38-201ENSMUST00000092215 Git1Q68FF6 770 aa10.79□□□□□ -0.68
Ccdc38-201ENSMUST00000092215 RimklbQ80WS1 387 aa10.79□□□□□ -0.68
Ccdc38-201ENSMUST00000092215 Elmo3Q8BYZ7 720 aa10.79□□□□□ -0.68
Ccdc38-201ENSMUST00000092215 Lonp1Q8CGK3 949 aaKnown RBP10.79□□□□□ -0.68
Ccdc38-201ENSMUST00000092215 Bud13Q8R149 637 aa10.79□□□□□ -0.68
Ccdc38-201ENSMUST00000092215 Fubp1Q91WJ8 651 aaKnown RBP10.79□□□□□ -0.68
Ccdc38-201ENSMUST00000092215 Trim54Q9ERP3 366 aa10.79□□□□□ -0.68
Ccdc38-201ENSMUST00000092215 Arih1Q9Z1K5 555 aa10.79□□□□□ -0.68
Ccdc38-201ENSMUST00000092215 Gm43951A0A0N4SUT6 962 aa10.79□□□□□ -0.68
Ccdc38-201ENSMUST00000092215 Lcmt1A0A0U1RNF2 332 aa10.79□□□□□ -0.68
Ccdc38-201ENSMUST00000092215 Zfp457L7N1X4 647 aa10.79□□□□□ -0.68
Ccdc38-201ENSMUST00000092215 Xrcc6P23475 608 aa10.79□□□□□ -0.68
Ccdc38-201ENSMUST00000092215 Carmil2Q3V3V9 1296 aa10.79□□□□□ -0.68
Ccdc38-201ENSMUST00000092215 Mrgprb8Q7TN51 330 aa10.79□□□□□ -0.68
Ccdc38-201ENSMUST00000092215 Mapk15Q80Y86 549 aa10.79□□□□□ -0.68
Ccdc38-201ENSMUST00000092215 Snx17Q8BVL3 470 aa10.79□□□□□ -0.68
Ccdc38-201ENSMUST00000092215 Stxbp5Q8K400 1152 aaKnown RBP10.79□□□□□ -0.68
Ccdc38-201ENSMUST00000092215 Ccdc94Q9D6J3 314 aa10.79□□□□□ -0.68
Ccdc38-201ENSMUST00000092215 Doc2gQ9ESN1 387 aa10.79□□□□□ -0.68
Ccdc38-201ENSMUST00000092215 Mettl1Q9Z120 268 aa10.79□□□□□ -0.68
Ccdc38-201ENSMUST00000092215 Ptchd4B9EKX1 904 aa10.78□□□□□ -0.68
Ccdc38-201ENSMUST00000092215 Men1O88559 611 aaKnown RBP10.78□□□□□ -0.68
Ccdc38-201ENSMUST00000092215 Irf8P23611 424 aa10.78□□□□□ -0.68
Ccdc38-201ENSMUST00000092215 Acvr2bP27040 536 aa10.78□□□□□ -0.68
Ccdc38-201ENSMUST00000092215 Tnnt2P50752 301 aa10.78□□□□□ -0.68
Ccdc38-201ENSMUST00000092215 Kcnj4P52189 445 aa10.78□□□□□ -0.68
Ccdc38-201ENSMUST00000092215 SpoplQ2M2N2 392 aa10.78□□□□□ -0.68
Ccdc38-201ENSMUST00000092215 Cyp11b1Q3TG86 501 aa10.78□□□□□ -0.68
Ccdc38-201ENSMUST00000092215 Olfr392Q7TRX6 312 aa10.78□□□□□ -0.68
Ccdc38-201ENSMUST00000092215 Celf4Q7TSY6 486 aa10.78□□□□□ -0.68
Ccdc38-201ENSMUST00000092215 Ints8Q80V86 995 aa10.78□□□□□ -0.68
Ccdc38-201ENSMUST00000092215 Slc9b1Q8C0X2 565 aa10.78□□□□□ -0.68
Ccdc38-201ENSMUST00000092215 Q8C5C9 218 aa10.78□□□□□ -0.68
Ccdc38-201ENSMUST00000092215 Kct2Q8K201 259 aa10.78□□□□□ -0.68
Ccdc38-201ENSMUST00000092215 Rpp40Q8R1F9 363 aa10.78□□□□□ -0.68
Ccdc38-201ENSMUST00000092215 Tspan8Q8R3G9 235 aa10.78□□□□□ -0.68
Ccdc38-201ENSMUST00000092215 CalcbQ99MP3 130 aa10.78□□□□□ -0.68
Ccdc38-201ENSMUST00000092215 Ush1cQ9ES64 910 aa10.78□□□□□ -0.68
Ccdc38-201ENSMUST00000092215 Gm13084A2A8N0 494 aa10.78□□□□□ -0.68
Ccdc38-201ENSMUST00000092215 Bach2P97303 839 aa10.78□□□□□ -0.68
Ccdc38-201ENSMUST00000092215 Asprv1Q09PK2 339 aa10.78□□□□□ -0.68
Ccdc38-201ENSMUST00000092215 Fam198aQ3UY90 562 aa10.78□□□□□ -0.68
Ccdc38-201ENSMUST00000092215 Gprc5aQ8BHL4 356 aa10.78□□□□□ -0.68
Ccdc38-201ENSMUST00000092215 Fam160b1Q8CDM8 764 aa10.78□□□□□ -0.68
Ccdc38-201ENSMUST00000092215 Ces1fQ91WU0 561 aa10.78□□□□□ -0.68
Ccdc38-201ENSMUST00000092215 Ino80bQ99PT3 375 aaKnown RBP10.78□□□□□ -0.68
Ccdc38-201ENSMUST00000092215 Wdr46Q9Z0H1 622 aaKnown RBP10.78□□□□□ -0.68
Ccdc38-201ENSMUST00000092215 Slc16a6B1AT66 607 aa10.78□□□□□ -0.68
Ccdc38-201ENSMUST00000092215 1700064H15RikD3Z4D4 81 aa10.78□□□□□ -0.68
Ccdc38-201ENSMUST00000092215 Pgrmc1O55022 195 aa10.78□□□□□ -0.68
Ccdc38-201ENSMUST00000092215 Fgd3O88842 733 aa10.78□□□□□ -0.68
Ccdc38-201ENSMUST00000092215 RaraP11416 462 aa10.78□□□□□ -0.68
Ccdc38-201ENSMUST00000092215 Trim43cP86449 446 aa10.78□□□□□ -0.68
Retrieved 100 of 22,080 RNA–protein pairs in 38.9 ms