RNA–Protein interactions for RNA: ENST00000641939.1

PHGDH-231, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 540 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-231ENST00000641939 MAEAQ7L5Y9 396 aa16.69■□□□□ 0.26
PHGDH-231ENST00000641939 IFNLR1Q8IU57 520 aaPredicted RBP16.69■□□□□ 0.26
PHGDH-231ENST00000641939 ATXN2LQ8WWM7 1075 aaKnown RBP16.69■□□□□ 0.26
PHGDH-231ENST00000641939 CASD1Q96PB1 797 aa16.69■□□□□ 0.26
PHGDH-231ENST00000641939 LMAN2LQ9H0V9 348 aa16.69■□□□□ 0.26
PHGDH-231ENST00000641939 GPRC5CQ9NQ84 441 aa16.69■□□□□ 0.26
PHGDH-231ENST00000641939 AAASQ9NRG9 546 aa16.69■□□□□ 0.26
PHGDH-231ENST00000641939 FAM105AQ9NUU6 356 aa16.69■□□□□ 0.26
PHGDH-231ENST00000641939 TYW1Q9NV66 732 aaKnown RBP16.69■□□□□ 0.26
PHGDH-231ENST00000641939 MYH11P35749 1972 aa16.68■□□□□ 0.26
PHGDH-231ENST00000641939 PP2D1A8MPX8 630 aa16.68■□□□□ 0.26
PHGDH-231ENST00000641939 ERLIN2O94905 339 aa16.68■□□□□ 0.26
PHGDH-231ENST00000641939 CYP11B2P19099 503 aa16.68■□□□□ 0.26
PHGDH-231ENST00000641939 HOXA11P31270 313 aaPredicted RBP16.68■□□□□ 0.26
PHGDH-231ENST00000641939 CLLU1OSQ5K130 101 aa16.68■□□□□ 0.26
PHGDH-231ENST00000641939 ARL6IP4Q66PJ3 421 aaKnown RBP16.68■□□□□ 0.26
PHGDH-231ENST00000641939 KLHL23Q8NBE8 558 aa16.68■□□□□ 0.26
PHGDH-231ENST00000641939 SNX21Q969T3 373 aa16.68■□□□□ 0.26
PHGDH-231ENST00000641939 NFKBIZQ9BYH8 718 aa16.68■□□□□ 0.26
PHGDH-231ENST00000641939 BHMT2Q9H2M3 363 aa16.68■□□□□ 0.26
PHGDH-231ENST00000641939 ALG13Q9NP73 1137 aaKnown RBP16.68■□□□□ 0.26
PHGDH-231ENST00000641939 DDX19AQ9NUU7 478 aaKnown RBP16.68■□□□□ 0.26
PHGDH-231ENST00000641939 COG5Q9UP83 839 aa16.68■□□□□ 0.26
PHGDH-231ENST00000641939 PLAGL2Q9UPG8 496 aa16.68■□□□□ 0.26
PHGDH-231ENST00000641939 PCDHB12Q9Y5F1 795 aa16.68■□□□□ 0.26
PHGDH-231ENST00000641939 VWA3AA6NCI4 1184 aa16.67■□□□□ 0.26
PHGDH-231ENST00000641939 INO80B-WBP1J3KQ70 363 aa16.67■□□□□ 0.26
PHGDH-231ENST00000641939 ZNF623O75123 536 aa16.67■□□□□ 0.26
PHGDH-231ENST00000641939 BMP15O95972 392 aa16.67■□□□□ 0.26
PHGDH-231ENST00000641939 ITGB1P05556 798 aa16.67■□□□□ 0.26
PHGDH-231ENST00000641939 SYT1P21579 422 aa16.67■□□□□ 0.26
PHGDH-231ENST00000641939 CDC25AP30304 524 aa16.67■□□□□ 0.26
PHGDH-231ENST00000641939 MRPS5P82675 430 aaKnown RBP16.67■□□□□ 0.26
PHGDH-231ENST00000641939 MBTD1Q05BQ5 628 aa16.67■□□□□ 0.26
PHGDH-231ENST00000641939 LRRC43Q8N309 656 aa16.67■□□□□ 0.26
PHGDH-231ENST00000641939 HELQQ8TDG4 1101 aa16.67■□□□□ 0.26
PHGDH-231ENST00000641939 MMTAG2Q9BU76 263 aaKnown RBP16.67■□□□□ 0.26
PHGDH-231ENST00000641939 CWH43Q9H720 699 aa16.67■□□□□ 0.26
PHGDH-231ENST00000641939 HCSTQ9UBK5 93 aa16.67■□□□□ 0.26
PHGDH-231ENST00000641939 DNM3Q9UQ16 869 aa16.67■□□□□ 0.26
PHGDH-231ENST00000641939 PCDHB2Q9Y5E7 798 aa16.67■□□□□ 0.26
PHGDH-231ENST00000641939 TCF20Q9UGU0 1960 aaKnown RBP16.67■□□□□ 0.26
PHGDH-231ENST00000641939 LRRIQ4A6NIV6 560 aa16.66■□□□□ 0.26
PHGDH-231ENST00000641939 DLL1O00548 723 aa16.66■□□□□ 0.26
PHGDH-231ENST00000641939 TSPAN1O60635 241 aa16.66■□□□□ 0.26
PHGDH-231ENST00000641939 EYA4O95677 639 aa16.66■□□□□ 0.26
PHGDH-231ENST00000641939 LAG3P18627 525 aa16.66■□□□□ 0.26
PHGDH-231ENST00000641939 AXLP30530 894 aa16.66■□□□□ 0.26
PHGDH-231ENST00000641939 NCBP1Q09161 790 aaKnown RBP16.66■□□□□ 0.26
PHGDH-231ENST00000641939 CSPP1Q1MSJ5 1256 aa16.66■□□□□ 0.26
PHGDH-231ENST00000641939 TJAP1Q5JTD0 557 aa16.66■□□□□ 0.26
PHGDH-231ENST00000641939 LRRC55Q6ZSA7 311 aa16.66■□□□□ 0.26
PHGDH-231ENST00000641939 COLGALT1Q8NBJ5 622 aa16.66■□□□□ 0.26
PHGDH-231ENST00000641939 SPPL3Q8TCT6 385 aa16.66■□□□□ 0.26
PHGDH-231ENST00000641939 RSPH1Q8WYR4 309 aa16.66■□□□□ 0.26
PHGDH-231ENST00000641939 HLA-CQ95604 372 aa16.66■□□□□ 0.26
PHGDH-231ENST00000641939 MRPL9Q9BYD2 267 aaKnown RBP16.66■□□□□ 0.26
PHGDH-231ENST00000641939 NSUN3Q9H649 340 aaKnown RBP16.66■□□□□ 0.26
PHGDH-231ENST00000641939 FOXD4L1Q9NU39 408 aa16.66■□□□□ 0.26
PHGDH-231ENST00000641939 E9PMD0 336 aa16.65■□□□□ 0.26
PHGDH-231ENST00000641939 TFF2Q03403 129 aa16.65■□□□□ 0.26
PHGDH-231ENST00000641939 AAK1Q2M2I8 961 aa16.65■□□□□ 0.26
PHGDH-231ENST00000641939 LONRF3Q496Y0 759 aa16.65■□□□□ 0.26
PHGDH-231ENST00000641939 UBXN11Q5T124 520 aa16.65■□□□□ 0.26
PHGDH-231ENST00000641939 CDCA2Q69YH5 1023 aaPredicted RBP16.65■□□□□ 0.26
PHGDH-231ENST00000641939 NOTUMQ6P988 496 aa16.65■□□□□ 0.26
PHGDH-231ENST00000641939 GLB1LQ6UWU2 654 aa16.65■□□□□ 0.26
PHGDH-231ENST00000641939 LPPQ93052 612 aa16.65■□□□□ 0.26
PHGDH-231ENST00000641939 PGBD4Q96DM1 585 aa16.65■□□□□ 0.26
PHGDH-231ENST00000641939 CCDC51Q96ER9 411 aa16.65■□□□□ 0.26
PHGDH-231ENST00000641939 AK8Q96MA6 479 aa16.65■□□□□ 0.26
PHGDH-231ENST00000641939 ASB2Q96Q27 587 aa16.65■□□□□ 0.26
PHGDH-231ENST00000641939 MYH15Q9Y2K3 1946 aa16.64■□□□□ 0.26
PHGDH-231ENST00000641939 MEIS3P2A8K0S8 358 aa16.64■□□□□ 0.25
PHGDH-231ENST00000641939 FGF18O76093 207 aa16.64■□□□□ 0.25
PHGDH-231ENST00000641939 DNAJB1P25685 340 aa16.64■□□□□ 0.25
PHGDH-231ENST00000641939 CAMK1Q14012 370 aa16.64■□□□□ 0.25
PHGDH-231ENST00000641939 SF3A1Q15459 793 aaKnown RBP16.64■□□□□ 0.25
PHGDH-231ENST00000641939 ZRSR1Q15695 479 aaKnown RBP16.64■□□□□ 0.25
PHGDH-231ENST00000641939 AMHR2Q16671 573 aa16.64■□□□□ 0.25
PHGDH-231ENST00000641939 TCEAL5Q5H9L2 206 aa16.64■□□□□ 0.25
PHGDH-231ENST00000641939 HYIQ5T013 277 aa16.64■□□□□ 0.25
PHGDH-231ENST00000641939 MRPL10Q7Z7H8 261 aaKnown RBP16.64■□□□□ 0.25
PHGDH-231ENST00000641939 HSCBQ8IWL3 235 aa16.64■□□□□ 0.25
PHGDH-231ENST00000641939 ZBTB8OSQ8IWT0 167 aa16.64■□□□□ 0.25
PHGDH-231ENST00000641939 THNSL1Q8IYQ7 743 aa16.64■□□□□ 0.25
PHGDH-231ENST00000641939 KCTD17Q8N5Z5 321 aa16.64■□□□□ 0.25
PHGDH-231ENST00000641939 POF1BQ8WVV4 589 aa16.64■□□□□ 0.25
PHGDH-231ENST00000641939 BSNDQ8WZ55 320 aa16.64■□□□□ 0.25
PHGDH-231ENST00000641939 KIFAP3Q92845 792 aa16.64■□□□□ 0.25
PHGDH-231ENST00000641939 CPB2Q96IY4 423 aa16.64■□□□□ 0.25
PHGDH-231ENST00000641939 COL25A1Q9BXS0 654 aaPredicted RBP16.64■□□□□ 0.25
PHGDH-231ENST00000641939 NT5C3AQ9H0P0 336 aa16.64■□□□□ 0.25
PHGDH-231ENST00000641939 C2orf40Q9H1Z8 148 aa16.64■□□□□ 0.25
PHGDH-231ENST00000641939 TDRD15B5MCY1 1934 aaKnown RBP16.64■□□□□ 0.25
PHGDH-231ENST00000641939 MUC3AQ02505 3323 aa16.63■□□□□ 0.25
PHGDH-231ENST00000641939 OFD1O75665 1012 aa16.63■□□□□ 0.25
PHGDH-231ENST00000641939 CSPG5O95196 566 aa16.63■□□□□ 0.25
PHGDH-231ENST00000641939 ARF4P18085 180 aaPredicted RBP16.63■□□□□ 0.25
PHGDH-231ENST00000641939 NCLP19338 710 aaKnown RBP16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms