RNA–Protein interactions for RNA: ENST00000641891.1

PHGDH-229, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,175 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-229ENST00000641891 R3HDM1Q15032 1099 aaKnown RBP18.43■□□□□ 0.54
PHGDH-229ENST00000641891 C8orf74Q6P047 294 aa18.43■□□□□ 0.54
PHGDH-229ENST00000641891 APOBEC3FQ8IUX4 373 aaKnown RBP18.43■□□□□ 0.54
PHGDH-229ENST00000641891 C12orf56Q8IXR9 622 aa18.43■□□□□ 0.54
PHGDH-229ENST00000641891 XXYLT1Q8NBI6 393 aa18.43■□□□□ 0.54
PHGDH-229ENST00000641891 AENQ8WTP8 325 aaKnown RBP18.43■□□□□ 0.54
PHGDH-229ENST00000641891 C12orf42Q96LP6 360 aa18.43■□□□□ 0.54
PHGDH-229ENST00000641891 ANKEF1Q9NU02 776 aa18.43■□□□□ 0.54
PHGDH-229ENST00000641891 VPS18Q9P253 973 aa18.43■□□□□ 0.54
PHGDH-229ENST00000641891 ADAMTS5Q9UNA0 930 aa18.43■□□□□ 0.54
PHGDH-229ENST00000641891 KIAA1217Q5T5P2 1943 aa18.43■□□□□ 0.54
PHGDH-229ENST00000641891 FOXN3O00409 490 aaPredicted RBP18.42■□□□□ 0.54
PHGDH-229ENST00000641891 KCNK3O14649 394 aa18.42■□□□□ 0.54
PHGDH-229ENST00000641891 KIF4AO95239 1232 aa18.42■□□□□ 0.54
PHGDH-229ENST00000641891 RPS6KA1Q15418 735 aa18.42■□□□□ 0.54
PHGDH-229ENST00000641891 ZNF746Q6NUN9 644 aaPredicted RBP18.42■□□□□ 0.54
PHGDH-229ENST00000641891 PALB2Q86YC2 1186 aa18.42■□□□□ 0.54
PHGDH-229ENST00000641891 NLGN2Q8NFZ4 835 aa18.42■□□□□ 0.54
PHGDH-229ENST00000641891 GPRASP2Q96D09 838 aa18.42■□□□□ 0.54
PHGDH-229ENST00000641891 KLRG1Q96E93 195 aa18.42■□□□□ 0.54
PHGDH-229ENST00000641891 ST6GALNAC4Q9H4F1 302 aa18.42■□□□□ 0.54
PHGDH-229ENST00000641891 FAN1Q9Y2M0 1017 aa18.42■□□□□ 0.54
PHGDH-229ENST00000641891 PCDHA10Q9Y5I2 948 aa18.42■□□□□ 0.54
PHGDH-229ENST00000641891 ZC3H4Q9UPT8 1303 aaKnown RBP18.42■□□□□ 0.54
PHGDH-229ENST00000641891 IGSF9BQ9UPX0 1349 aa18.42■□□□□ 0.54
PHGDH-229ENST00000641891 PHACTR2O75167 634 aa18.42■□□□□ 0.54
PHGDH-229ENST00000641891 NPTX2P47972 431 aa18.42■□□□□ 0.54
PHGDH-229ENST00000641891 DLK2Q6UY11 383 aa18.42■□□□□ 0.54
PHGDH-229ENST00000641891 TMEM161BQ8NDZ6 487 aa18.42■□□□□ 0.54
PHGDH-229ENST00000641891 SAAL1Q96ER3 474 aa18.42■□□□□ 0.54
PHGDH-229ENST00000641891 TIPINQ9BVW5 301 aa18.42■□□□□ 0.54
PHGDH-229ENST00000641891 UBE2TQ9NPD8 197 aaPredicted RBP18.42■□□□□ 0.54
PHGDH-229ENST00000641891 A1CFQ9NQ94 594 aaKnown RBP18.42■□□□□ 0.54
PHGDH-229ENST00000641891 CYP39A1Q9NYL5 469 aa18.42■□□□□ 0.54
PHGDH-229ENST00000641891 TAS2R14Q9NYV8 317 aa18.42■□□□□ 0.54
PHGDH-229ENST00000641891 ZKSCAN7Q9P0L1 754 aaPredicted RBP18.42■□□□□ 0.54
PHGDH-229ENST00000641891 STIM2Q9P246 746 aa18.42■□□□□ 0.54
PHGDH-229ENST00000641891 ERICH4A6NGS2 130 aa18.41■□□□□ 0.54
PHGDH-229ENST00000641891 PEX10O60683 326 aa18.41■□□□□ 0.54
PHGDH-229ENST00000641891 ADSSP30520 456 aa18.41■□□□□ 0.54
PHGDH-229ENST00000641891 EPC2Q52LR7 807 aa18.41■□□□□ 0.54
PHGDH-229ENST00000641891 CATSPERGQ6ZRH7 1159 aa18.41■□□□□ 0.54
PHGDH-229ENST00000641891 CBWD2Q8IUF1 395 aa18.41■□□□□ 0.54
PHGDH-229ENST00000641891 NSUN6Q8TEA1 469 aaKnown RBP18.41■□□□□ 0.54
PHGDH-229ENST00000641891 SLC20A1Q8WUM9 679 aa18.41■□□□□ 0.54
PHGDH-229ENST00000641891 TAF4BQ92750 862 aa18.41■□□□□ 0.54
PHGDH-229ENST00000641891 CEP170P1Q96L14 293 aa18.41■□□□□ 0.54
PHGDH-229ENST00000641891 OSGEPQ9NPF4 335 aa18.41■□□□□ 0.54
PHGDH-229ENST00000641891 SEPT11Q9NVA2 429 aaKnown RBP18.41■□□□□ 0.54
PHGDH-229ENST00000641891 RNF14Q9UBS8 474 aa18.41■□□□□ 0.54
PHGDH-229ENST00000641891 TBX20Q9UMR3 447 aa18.41■□□□□ 0.54
PHGDH-229ENST00000641891 WDR81Q562E7 1941 aa18.41■□□□□ 0.54
PHGDH-229ENST00000641891 ZSCAN5CA6NGD5 496 aaPredicted RBP18.41■□□□□ 0.54
PHGDH-229ENST00000641891 STBD1O95210 358 aa18.41■□□□□ 0.54
PHGDH-229ENST00000641891 LMNB1P20700 586 aa18.41■□□□□ 0.54
PHGDH-229ENST00000641891 ABCB4P21439 1286 aa18.41■□□□□ 0.54
PHGDH-229ENST00000641891 CYP2C19P33261 490 aa18.41■□□□□ 0.54
PHGDH-229ENST00000641891 HIRAP54198 1017 aaPredicted RBP18.41■□□□□ 0.54
PHGDH-229ENST00000641891 SWSAP1Q6NVH7 229 aa18.41■□□□□ 0.54
PHGDH-229ENST00000641891 XRRA1Q6P2D8 792 aa18.41■□□□□ 0.54
PHGDH-229ENST00000641891 KAT5Q92993 513 aa18.41■□□□□ 0.54
PHGDH-229ENST00000641891 SENP7Q9BQF6 1050 aa18.41■□□□□ 0.54
PHGDH-229ENST00000641891 SGIP1Q9BQI5 828 aa18.41■□□□□ 0.54
PHGDH-229ENST00000641891 VIPAS39Q9H9C1 493 aa18.41■□□□□ 0.54
PHGDH-229ENST00000641891 CD2APQ9Y5K6 639 aa18.41■□□□□ 0.54
PHGDH-229ENST00000641891 ATP8B3O60423 1300 aa18.41■□□□□ 0.54
PHGDH-229ENST00000641891 A0A0U1RQG5 324 aaPredicted RBP18.4■□□□□ 0.54
PHGDH-229ENST00000641891 GLI1P08151 1106 aa18.4■□□□□ 0.54
PHGDH-229ENST00000641891 OAZ1P54368 228 aa18.4■□□□□ 0.54
PHGDH-229ENST00000641891 KIF22Q14807 665 aa18.4■□□□□ 0.54
PHGDH-229ENST00000641891 IFI16Q16666 785 aaKnown RBP18.4■□□□□ 0.54
PHGDH-229ENST00000641891 TMEM174Q8WUU8 243 aa18.4■□□□□ 0.54
PHGDH-229ENST00000641891 KRT12Q99456 494 aa18.4■□□□□ 0.54
PHGDH-229ENST00000641891 TMEM117Q9H0C3 514 aa18.4■□□□□ 0.54
PHGDH-229ENST00000641891 ADAM21Q9UKJ8 722 aa18.4■□□□□ 0.54
PHGDH-229ENST00000641891 INTUQ9ULD6 942 aa18.4■□□□□ 0.54
PHGDH-229ENST00000641891 PFASO15067 1338 aa18.4■□□□□ 0.54
PHGDH-229ENST00000641891 ARID2Q68CP9 1835 aa18.4■□□□□ 0.54
PHGDH-229ENST00000641891 A0A0A6YYK5 440 aaPredicted RBP18.4■□□□□ 0.54
PHGDH-229ENST00000641891 DENND3A2RUS2 1198 aa18.4■□□□□ 0.54
PHGDH-229ENST00000641891 SPDYE16A6NNV3 312 aaPredicted RBP18.4■□□□□ 0.54
PHGDH-229ENST00000641891 C19orf81C9J6K1 198 aa18.4■□□□□ 0.54
PHGDH-229ENST00000641891 ZBTB48P10074 688 aaPredicted RBP18.4■□□□□ 0.54
PHGDH-229ENST00000641891 DMP1Q13316 513 aaPredicted RBP18.4■□□□□ 0.54
PHGDH-229ENST00000641891 SND1Q7KZF4 910 aaKnown RBP eCLIP18.4■□□□□ 0.541e-7■■■■□ 19.4
PHGDH-229ENST00000641891 CCDC60Q8IWA6 550 aaPredicted RBP18.4■□□□□ 0.54
PHGDH-229ENST00000641891 USP38Q8NB14 1042 aa18.4■□□□□ 0.54
PHGDH-229ENST00000641891 RDM1Q8NG50 284 aa18.4■□□□□ 0.54
PHGDH-229ENST00000641891 RIN2Q8WYP3 895 aaPredicted RBP18.4■□□□□ 0.54
PHGDH-229ENST00000641891 ARHGEF26Q96DR7 871 aa18.4■□□□□ 0.54
PHGDH-229ENST00000641891 TEX13BQ9BXU2 312 aa18.4■□□□□ 0.54
PHGDH-229ENST00000641891 ACAD9Q9H845 621 aa18.4■□□□□ 0.54
PHGDH-229ENST00000641891 GPRC5DQ9NZD1 345 aa18.4■□□□□ 0.54
PHGDH-229ENST00000641891 ADGRA3Q8IWK6 1321 aa18.39■□□□□ 0.54
PHGDH-229ENST00000641891 LCTP09848 1927 aa18.39■□□□□ 0.53
PHGDH-229ENST00000641891 ESYT3A0FGR9 886 aa18.39■□□□□ 0.53
PHGDH-229ENST00000641891 SYF2O95926 243 aaKnown RBP18.39■□□□□ 0.53
PHGDH-229ENST00000641891 TNFAIP3P21580 790 aa18.39■□□□□ 0.53
PHGDH-229ENST00000641891 SLC39A4Q6P5W5 647 aa18.39■□□□□ 0.53
PHGDH-229ENST00000641891 PEX26Q7Z412 305 aa18.39■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms