RNA–Protein interactions for RNA: ENST00000640440.1

HNRNPU-229, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

TSL 3

Gene HNRNPU, Length 871 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-229ENST00000640440 XPNPEP1Q9NQW7 623 aa16.06■□□□□ 0.16
HNRNPU-229ENST00000640440 AGPAT5Q9NUQ2 364 aa16.06■□□□□ 0.16
HNRNPU-229ENST00000640440 FAM105AQ9NUU6 356 aa16.06■□□□□ 0.16
HNRNPU-229ENST00000640440 SKIP12755 728 aa16.05■□□□□ 0.16
HNRNPU-229ENST00000640440 NDUFV1P49821 464 aa16.05■□□□□ 0.16
HNRNPU-229ENST00000640440 RABEP1Q15276 862 aa16.05■□□□□ 0.16
HNRNPU-229ENST00000640440 TTC38Q5R3I4 469 aa16.05■□□□□ 0.16
HNRNPU-229ENST00000640440 KCNT2Q6UVM3 1135 aa16.05■□□□□ 0.16
HNRNPU-229ENST00000640440 FAM178BQ8IXR5 827 aa16.05■□□□□ 0.16
HNRNPU-229ENST00000640440 TRAIPQ9BWF2 469 aa16.05■□□□□ 0.16
HNRNPU-229ENST00000640440 MRPL9Q9BYD2 267 aaKnown RBP16.05■□□□□ 0.16
HNRNPU-229ENST00000640440 CD320Q9NPF0 282 aa16.05■□□□□ 0.16
HNRNPU-229ENST00000640440 ANKEF1Q9NU02 776 aa16.05■□□□□ 0.16
HNRNPU-229ENST00000640440 MYH11P35749 1972 aa16.04■□□□□ 0.16
HNRNPU-229ENST00000640440 A0A087WWV3 80 aa16.04■□□□□ 0.16
HNRNPU-229ENST00000640440 MEIS3P2A8K0S8 358 aa16.04■□□□□ 0.16
HNRNPU-229ENST00000640440 ASAP2O43150 1006 aa16.04■□□□□ 0.16
HNRNPU-229ENST00000640440 DGAT1O75907 488 aa16.04■□□□□ 0.16
HNRNPU-229ENST00000640440 OR52Z1P0C646 297 aa16.04■□□□□ 0.16
HNRNPU-229ENST00000640440 SSTR3P32745 418 aaPredicted RBP16.04■□□□□ 0.16
HNRNPU-229ENST00000640440 PPM1AP35813 382 aa16.04■□□□□ 0.16
HNRNPU-229ENST00000640440 RARRES1P49788 294 aa16.04■□□□□ 0.16
HNRNPU-229ENST00000640440 RAB27AP51159 221 aa16.04■□□□□ 0.16
HNRNPU-229ENST00000640440 ERVFC1P60507 584 aa16.04■□□□□ 0.16
HNRNPU-229ENST00000640440 ADAM15Q13444 863 aa16.04■□□□□ 0.16
HNRNPU-229ENST00000640440 PLPP4Q5VZY2 271 aa16.04■□□□□ 0.16
HNRNPU-229ENST00000640440 NOSTRINQ8IVI9 506 aa16.04■□□□□ 0.16
HNRNPU-229ENST00000640440 EFHBQ8N7U6 833 aa16.04■□□□□ 0.16
HNRNPU-229ENST00000640440 ASAP3Q8TDY4 903 aa16.04■□□□□ 0.16
HNRNPU-229ENST00000640440 PIGOQ8TEQ8 1089 aa16.04■□□□□ 0.16
HNRNPU-229ENST00000640440 MRPS27Q92552 414 aaKnown RBP16.04■□□□□ 0.16
HNRNPU-229ENST00000640440 TLE6Q9H808 572 aa16.04■□□□□ 0.16
HNRNPU-229ENST00000640440 CD207Q9UJ71 328 aa16.04■□□□□ 0.16
HNRNPU-229ENST00000640440 FAM50BQ9Y247 325 aa16.04■□□□□ 0.16
HNRNPU-229ENST00000640440 INPP5FQ9Y2H2 1132 aa16.04■□□□□ 0.16
HNRNPU-229ENST00000640440 TRIP11Q15643 1979 aa16.04■□□□□ 0.16
HNRNPU-229ENST00000640440 FSCN2O14926 492 aa16.03■□□□□ 0.16
HNRNPU-229ENST00000640440 PER2O15055 1255 aa16.03■□□□□ 0.16
HNRNPU-229ENST00000640440 USO1O60763 962 aaKnown RBP16.03■□□□□ 0.16
HNRNPU-229ENST00000640440 SPATA31C1P0DKV0 1188 aa16.03■□□□□ 0.16
HNRNPU-229ENST00000640440 TECP42680 631 aa16.03■□□□□ 0.16
HNRNPU-229ENST00000640440 PLCB3Q01970 1234 aa16.03■□□□□ 0.16
HNRNPU-229ENST00000640440 ORC2Q13416 577 aaPredicted RBP16.03■□□□□ 0.16
HNRNPU-229ENST00000640440 MXD4Q14582 209 aaPredicted RBP16.03■□□□□ 0.16
HNRNPU-229ENST00000640440 GLB1LQ6UWU2 654 aa16.03■□□□□ 0.16
HNRNPU-229ENST00000640440 GJD3Q8N144 294 aa16.03■□□□□ 0.16
HNRNPU-229ENST00000640440 SLC39A11Q8N1S5 342 aa16.03■□□□□ 0.16
HNRNPU-229ENST00000640440 TCF25Q9BQ70 676 aa16.03■□□□□ 0.16
HNRNPU-229ENST00000640440 ENTPD7Q9NQZ7 604 aa16.03■□□□□ 0.16
HNRNPU-229ENST00000640440 SPG21Q9NZD8 308 aa16.03■□□□□ 0.16
HNRNPU-229ENST00000640440 PUF60Q9UHX1 559 aaKnown RBP16.03■□□□□ 0.16
HNRNPU-229ENST00000640440 LZTS1Q9Y250 596 aa16.03■□□□□ 0.16
HNRNPU-229ENST00000640440 PCDHB2Q9Y5E7 798 aa16.03■□□□□ 0.16
HNRNPU-229ENST00000640440 ST18O60284 1047 aa16.02■□□□□ 0.16
HNRNPU-229ENST00000640440 ZNF623O75123 536 aa16.02■□□□□ 0.16
HNRNPU-229ENST00000640440 ZC3H11AO75152 810 aaKnown RBP eCLIP16.02■□□□□ 0.16
HNRNPU-229ENST00000640440 MED24O75448 989 aa16.02■□□□□ 0.16
HNRNPU-229ENST00000640440 ERLIN2O94905 339 aa16.02■□□□□ 0.16
HNRNPU-229ENST00000640440 GLP2RO95838 553 aa16.02■□□□□ 0.16
HNRNPU-229ENST00000640440 HOXA11P31270 313 aaPredicted RBP16.02■□□□□ 0.16
HNRNPU-229ENST00000640440 BCAR1P56945 870 aa16.02■□□□□ 0.16
HNRNPU-229ENST00000640440 PTENP60484 403 aa16.02■□□□□ 0.16
HNRNPU-229ENST00000640440 KRT17Q04695 432 aa16.02■□□□□ 0.16
HNRNPU-229ENST00000640440 SMAD4Q13485 552 aaKnown RBP16.02■□□□□ 0.16
HNRNPU-229ENST00000640440 TFDP1Q14186 410 aa16.02■□□□□ 0.16
HNRNPU-229ENST00000640440 NBR1Q14596 966 aa16.02■□□□□ 0.16
HNRNPU-229ENST00000640440 DUSP6Q16828 381 aa16.02■□□□□ 0.16
HNRNPU-229ENST00000640440 POTEGQ6S5H5 508 aa16.02■□□□□ 0.16
HNRNPU-229ENST00000640440 CATSPER3Q86XQ3 398 aa16.02■□□□□ 0.16
HNRNPU-229ENST00000640440 KHSRPQ92945 711 aaKnown RBP eCLIP16.02■□□□□ 0.16
HNRNPU-229ENST00000640440 POLR3FQ9H1D9 316 aaPredicted RBP16.02■□□□□ 0.16
HNRNPU-229ENST00000640440 EPHX3Q9H6B9 360 aa16.02■□□□□ 0.16
HNRNPU-229ENST00000640440 TUFT1Q9NNX1 390 aa16.02■□□□□ 0.16
HNRNPU-229ENST00000640440 TBC1D13Q9NVG8 400 aa16.02■□□□□ 0.16
HNRNPU-229ENST00000640440 CLEC1BQ9P126 229 aa16.02■□□□□ 0.16
HNRNPU-229ENST00000640440 BARX2Q9UMQ3 279 aaPredicted RBP16.02■□□□□ 0.16
HNRNPU-229ENST00000640440 NOL7Q9UMY1 257 aaKnown RBP16.02■□□□□ 0.16
HNRNPU-229ENST00000640440 MYO10Q9HD67 2058 aa16.01■□□□□ 0.15
HNRNPU-229ENST00000640440 NT5C1B-RDH14C9J2C7 533 aa16.01■□□□□ 0.15
HNRNPU-229ENST00000640440 INO80B-WBP1J3KQ70 363 aa16.01■□□□□ 0.15
HNRNPU-229ENST00000640440 MBTPS2O43462 519 aa16.01■□□□□ 0.15
HNRNPU-229ENST00000640440 OFD1O75665 1012 aa16.01■□□□□ 0.15
HNRNPU-229ENST00000640440 GLRA2P23416 452 aa16.01■□□□□ 0.15
HNRNPU-229ENST00000640440 ARL2P36404 184 aa16.01■□□□□ 0.15
HNRNPU-229ENST00000640440 TRAPPC10P48553 1259 aa16.01■□□□□ 0.15
HNRNPU-229ENST00000640440 ALDH7A1P49419 539 aaKnown RBP16.01■□□□□ 0.15
HNRNPU-229ENST00000640440 RBM10P98175 930 aaKnown RBP16.01■□□□□ 0.15
HNRNPU-229ENST00000640440 ZP2Q05996 745 aa16.01■□□□□ 0.15
HNRNPU-229ENST00000640440 CAPSQ13938 189 aa16.01■□□□□ 0.15
HNRNPU-229ENST00000640440 SMAD2Q15796 467 aaKnown RBP16.01■□□□□ 0.15
HNRNPU-229ENST00000640440 NOMO2Q5JPE7 1267 aa16.01■□□□□ 0.15
HNRNPU-229ENST00000640440 UBXN11Q5T124 520 aa16.01■□□□□ 0.15
HNRNPU-229ENST00000640440 PDE12Q6L8Q7 609 aaKnown RBP16.01■□□□□ 0.15
HNRNPU-229ENST00000640440 ERMNQ8TAM6 284 aa16.01■□□□□ 0.15
HNRNPU-229ENST00000640440 RSPH1Q8WYR4 309 aa16.01■□□□□ 0.15
HNRNPU-229ENST00000640440 PGBD4Q96DM1 585 aa16.01■□□□□ 0.15
HNRNPU-229ENST00000640440 POLR3CQ9BUI4 534 aaPredicted RBP16.01■□□□□ 0.15
HNRNPU-229ENST00000640440 GBP3Q9H0R5 595 aa16.01■□□□□ 0.15
HNRNPU-229ENST00000640440 UPF2Q9HAU5 1272 aaKnown RBP16.01■□□□□ 0.15
HNRNPU-229ENST00000640440 GTF3C3Q9Y5Q9 886 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms