RNA–Protein interactions for RNA: ENST00000640306.1

HNRNPU-228, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

TSL 5

Gene HNRNPU, Length 2,917 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-228ENST00000640306 PRR12Q9ULL5 1215 aa17.9■□□□□ 0.46
HNRNPU-228ENST00000640306 ALG6Q9Y672 507 aa17.9■□□□□ 0.46
HNRNPU-228ENST00000640306 IGLV3-22A0A075B6J6 115 aa17.89■□□□□ 0.46
HNRNPU-228ENST00000640306 GAS7O60861 476 aa17.89■□□□□ 0.46
HNRNPU-228ENST00000640306 PTENP60484 403 aa17.89■□□□□ 0.46
HNRNPU-228ENST00000640306 ACTN3Q08043 901 aaPredicted RBP17.89■□□□□ 0.46
HNRNPU-228ENST00000640306 MESDQ14696 234 aa17.89■□□□□ 0.46
HNRNPU-228ENST00000640306 ZNF720Q7Z2F6 126 aa17.89■□□□□ 0.46
HNRNPU-228ENST00000640306 SPATS2Q86XZ4 545 aaKnown RBP17.89■□□□□ 0.46
HNRNPU-228ENST00000640306 C1orf131Q8NDD1 294 aaKnown RBP17.89■□□□□ 0.46
HNRNPU-228ENST00000640306 ERP44Q9BS26 406 aa17.89■□□□□ 0.46
HNRNPU-228ENST00000640306 CTNND1O60716 968 aaKnown RBP17.89■□□□□ 0.45
HNRNPU-228ENST00000640306 FOSP01100 380 aaPredicted RBP17.89■□□□□ 0.45
HNRNPU-228ENST00000640306 C6orf89Q6UWU4 347 aa17.89■□□□□ 0.45
HNRNPU-228ENST00000640306 JAMLQ86YT9 394 aa17.89■□□□□ 0.45
HNRNPU-228ENST00000640306 VCPKMTQ9H867 229 aa17.89■□□□□ 0.45
HNRNPU-228ENST00000640306 GOLGA6L10A0A0M3HER8 536 aa17.88■□□□□ 0.45
HNRNPU-228ENST00000640306 BHMG1C9JSJ3 638 aaPredicted RBP17.88■□□□□ 0.45
HNRNPU-228ENST00000640306 FTLP02792 175 aaPredicted RBP17.88■□□□□ 0.45
HNRNPU-228ENST00000640306 GAP43P17677 238 aa17.88■□□□□ 0.45
HNRNPU-228ENST00000640306 GCLMP48507 274 aa17.88■□□□□ 0.45
HNRNPU-228ENST00000640306 ARHGEF19Q8IW93 802 aa17.88■□□□□ 0.45
HNRNPU-228ENST00000640306 DHX37Q8IY37 1157 aaKnown RBP17.88■□□□□ 0.45
HNRNPU-228ENST00000640306 EIF1ADQ8N9N8 165 aaKnown RBP17.88■□□□□ 0.45
HNRNPU-228ENST00000640306 FIZ1Q96SL8 496 aa17.88■□□□□ 0.45
HNRNPU-228ENST00000640306 RAB17Q9H0T7 212 aa17.88■□□□□ 0.45
HNRNPU-228ENST00000640306 INTUQ9ULD6 942 aa17.88■□□□□ 0.45
HNRNPU-228ENST00000640306 ZBTB21Q9ULJ3 1066 aa17.88■□□□□ 0.45
HNRNPU-228ENST00000640306 SUGT1Q9Y2Z0 365 aa17.88■□□□□ 0.45
HNRNPU-228ENST00000640306 TCRBV7S2A1N4TA0A589 114 aa17.88■□□□□ 0.45
HNRNPU-228ENST00000640306 GTPBP10A4D1E9 387 aaKnown RBP17.88■□□□□ 0.45
HNRNPU-228ENST00000640306 CLSTN1O94985 981 aa17.88■□□□□ 0.45
HNRNPU-228ENST00000640306 ARP10275 920 aa17.88■□□□□ 0.45
HNRNPU-228ENST00000640306 FGFR4P22455 802 aa17.88■□□□□ 0.45
HNRNPU-228ENST00000640306 IFI35P80217 286 aaPredicted RBP17.88■□□□□ 0.45
HNRNPU-228ENST00000640306 SLC29A2Q14542 456 aa17.88■□□□□ 0.45
HNRNPU-228ENST00000640306 CCDC38Q502W7 563 aa17.88■□□□□ 0.45
HNRNPU-228ENST00000640306 KIAA1755Q5JYT7 1200 aa17.88■□□□□ 0.45
HNRNPU-228ENST00000640306 TMEM179Q6ZVK1 233 aa17.88■□□□□ 0.45
HNRNPU-228ENST00000640306 CCDC25Q86WR0 208 aa17.88■□□□□ 0.45
HNRNPU-228ENST00000640306 CACNA2D3Q8IZS8 1091 aa17.88■□□□□ 0.45
HNRNPU-228ENST00000640306 RNF25Q96BH1 459 aaPredicted RBP17.88■□□□□ 0.45
HNRNPU-228ENST00000640306 EMSYQ7Z589 1322 aa17.88■□□□□ 0.45
HNRNPU-228ENST00000640306 KCNJ1P48048 391 aa17.88■□□□□ 0.45
HNRNPU-228ENST00000640306 IFNAR2P48551 515 aa17.88■□□□□ 0.45
HNRNPU-228ENST00000640306 PMS2P54278 862 aa17.88■□□□□ 0.45
HNRNPU-228ENST00000640306 NPEPPSP55786 919 aa17.88■□□□□ 0.45
HNRNPU-228ENST00000640306 NBPF9Q3BBW0 867 aa17.88■□□□□ 0.45
HNRNPU-228ENST00000640306 AGBL2Q5U5Z8 902 aa17.88■□□□□ 0.45
HNRNPU-228ENST00000640306 ZNF622Q969S3 477 aaKnown RBP eCLIP17.88■□□□□ 0.459e-16■■□□□ 13.1
HNRNPU-228ENST00000640306 EPB41L4BQ9H329 900 aa17.88■□□□□ 0.45
HNRNPU-228ENST00000640306 SEMA4AQ9H3S1 761 aa17.88■□□□□ 0.45
HNRNPU-228ENST00000640306 AZI2Q9H6S1 392 aa17.88■□□□□ 0.45
HNRNPU-228ENST00000640306 SLC40A1Q9NP59 571 aa17.88■□□□□ 0.45
HNRNPU-228ENST00000640306 HAUS2Q9NVX0 235 aa17.88■□□□□ 0.45
HNRNPU-228ENST00000640306 FOCADQ5VW36 1801 aa17.88■□□□□ 0.45
HNRNPU-228ENST00000640306 CHN1P15882 459 aa17.87■□□□□ 0.45
HNRNPU-228ENST00000640306 CIITAP33076 1130 aa17.87■□□□□ 0.45
HNRNPU-228ENST00000640306 BYSLQ13895 437 aaKnown RBP17.87■□□□□ 0.45
HNRNPU-228ENST00000640306 DUPD1Q68J44 220 aa17.87■□□□□ 0.45
HNRNPU-228ENST00000640306 ZDHHC14Q8IZN3 488 aa17.87■□□□□ 0.45
HNRNPU-228ENST00000640306 ACER1Q8TDN7 264 aa17.87■□□□□ 0.45
HNRNPU-228ENST00000640306 UTRNP46939 3433 aa17.87■□□□□ 0.45
HNRNPU-228ENST00000640306 ATAD5Q96QE3 1844 aa17.87■□□□□ 0.45
HNRNPU-228ENST00000640306 NCANO14594 1321 aa17.87■□□□□ 0.45
HNRNPU-228ENST00000640306 BFSP1Q12934 665 aa17.87■□□□□ 0.45
HNRNPU-228ENST00000640306 AGPAT1Q99943 283 aa17.87■□□□□ 0.45
HNRNPU-228ENST00000640306 KLC4Q9NSK0 619 aa17.87■□□□□ 0.45
HNRNPU-228ENST00000640306 ZDHHC18Q9NUE0 388 aa17.87■□□□□ 0.45
HNRNPU-228ENST00000640306 K7ENM7 598 aa17.86■□□□□ 0.45
HNRNPU-228ENST00000640306 HIP1RO75146 1068 aa17.86■□□□□ 0.45
HNRNPU-228ENST00000640306 PPFIA2O75334 1257 aa17.86■□□□□ 0.45
HNRNPU-228ENST00000640306 PDE4CQ08493 712 aa17.86■□□□□ 0.45
HNRNPU-228ENST00000640306 DENND2CQ68D51 928 aa17.86■□□□□ 0.45
HNRNPU-228ENST00000640306 NSMFQ6X4W1 530 aa17.86■□□□□ 0.45
HNRNPU-228ENST00000640306 YTHDF3Q7Z739 585 aaKnown RBP17.86■□□□□ 0.45
HNRNPU-228ENST00000640306 RPUSD2Q8IZ73 545 aaKnown RBP17.86■□□□□ 0.45
HNRNPU-228ENST00000640306 SEC14L1Q92503 715 aa17.86■□□□□ 0.45
HNRNPU-228ENST00000640306 ZDHHC15Q96MV8 337 aa17.86■□□□□ 0.45
HNRNPU-228ENST00000640306 SYT11Q9BT88 431 aa17.86■□□□□ 0.45
HNRNPU-228ENST00000640306 PAGR1Q9BTK6 254 aa17.86■□□□□ 0.45
HNRNPU-228ENST00000640306 MTFR1LQ9H019 292 aa17.86■□□□□ 0.45
HNRNPU-228ENST00000640306 CARD9Q9H257 536 aa17.86■□□□□ 0.45
HNRNPU-228ENST00000640306 UNC45AQ9H3U1 944 aa17.86■□□□□ 0.45
HNRNPU-228ENST00000640306 ANKRD62A6NC57 917 aa17.86■□□□□ 0.45
HNRNPU-228ENST00000640306 EIF3DO15371 548 aaKnown RBP eCLIP17.86■□□□□ 0.45
HNRNPU-228ENST00000640306 PSMD10O75832 226 aa17.86■□□□□ 0.45
HNRNPU-228ENST00000640306 SETQ01105 290 aaPredicted RBP17.86■□□□□ 0.45
HNRNPU-228ENST00000640306 TTC27Q6P3X3 843 aa17.86■□□□□ 0.45
HNRNPU-228ENST00000640306 ZDHHC24Q6UX98 284 aa17.86■□□□□ 0.45
HNRNPU-228ENST00000640306 NEK9Q8TD19 979 aa17.86■□□□□ 0.45
HNRNPU-228ENST00000640306 EPS8L3Q8TE67 593 aaKnown RBP17.86■□□□□ 0.45
HNRNPU-228ENST00000640306 CAMKK2Q96RR4 588 aa17.86■□□□□ 0.45
HNRNPU-228ENST00000640306 POP1Q99575 1024 aaKnown RBP17.86■□□□□ 0.45
HNRNPU-228ENST00000640306 LXNQ9BS40 222 aa17.86■□□□□ 0.45
HNRNPU-228ENST00000640306 ATXN2Q99700 1313 aaKnown RBP17.86■□□□□ 0.45
HNRNPU-228ENST00000640306 TMEM150BA6NC51 233 aa17.85■□□□□ 0.45
HNRNPU-228ENST00000640306 GOLGA8IPA6NC78 632 aa17.85■□□□□ 0.45
HNRNPU-228ENST00000640306 GOLGA8JA6NMD2 632 aa17.85■□□□□ 0.45
HNRNPU-228ENST00000640306 ANKRD63C9JTQ0 380 aa17.85■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms