RNA–Protein interactions for RNA: ENST00000639629.1

CCDC7-215, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CCDC7, Length 4,158 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-215ENST00000639629 EXTL1Q92935 676 aa0.55□□□□□ -2.32
CCDC7-215ENST00000639629 GPR35Q9HC97 309 aa0.55□□□□□ -2.32
CCDC7-215ENST00000639629 TMEM8AQ9HCN3 771 aa0.55□□□□□ -2.32
CCDC7-215ENST00000639629 COL2A1P02458 1487 aaPredicted RBP0.55□□□□□ -2.32
CCDC7-215ENST00000639629 FRAS1Q86XX4 4008 aa0.54□□□□□ -2.32
CCDC7-215ENST00000639629 MINDY4BA8MYZ0 360 aa0.54□□□□□ -2.32
CCDC7-215ENST00000639629 SLC27A2O14975 620 aa0.54□□□□□ -2.32
CCDC7-215ENST00000639629 MPPED1O15442 326 aa0.54□□□□□ -2.32
CCDC7-215ENST00000639629 TOMM40O96008 361 aa0.54□□□□□ -2.32
CCDC7-215ENST00000639629 JUNP05412 331 aaKnown RBP0.54□□□□□ -2.32
CCDC7-215ENST00000639629 SNRPB2P08579 225 aaKnown RBP0.54□□□□□ -2.32
CCDC7-215ENST00000639629 MCM7P33993 719 aa0.54□□□□□ -2.32
CCDC7-215ENST00000639629 PDE6BP35913 854 aa0.54□□□□□ -2.32
CCDC7-215ENST00000639629 GDF5P43026 501 aa0.54□□□□□ -2.32
CCDC7-215ENST00000639629 LIMS1P48059 325 aa0.54□□□□□ -2.32
CCDC7-215ENST00000639629 CACNA2D1P54289 1103 aa0.54□□□□□ -2.32
CCDC7-215ENST00000639629 RABL3Q5HYI8 236 aa0.54□□□□□ -2.32
CCDC7-215ENST00000639629 SPDYAQ5MJ70 313 aa0.54□□□□□ -2.32
CCDC7-215ENST00000639629 MEX3CQ5U5Q3 659 aaKnown RBP0.54□□□□□ -2.32
CCDC7-215ENST00000639629 MFSD5Q6N075 450 aa0.54□□□□□ -2.32
CCDC7-215ENST00000639629 GK5Q6ZS86 529 aa0.54□□□□□ -2.32
CCDC7-215ENST00000639629 ARHGEF18Q6ZSZ5 1173 aa0.54□□□□□ -2.32
CCDC7-215ENST00000639629 ARHGAP27Q6ZUM4 889 aa0.54□□□□□ -2.32
CCDC7-215ENST00000639629 SPRED1Q7Z699 444 aa0.54□□□□□ -2.32
CCDC7-215ENST00000639629 ZZZ3Q8IYH5 903 aa0.54□□□□□ -2.32
CCDC7-215ENST00000639629 TMEM87AQ8NBN3 555 aa0.54□□□□□ -2.32
CCDC7-215ENST00000639629 OR5AN1Q8NGI8 311 aa0.54□□□□□ -2.32
CCDC7-215ENST00000639629 TMEM169Q96HH4 297 aa0.54□□□□□ -2.32
CCDC7-215ENST00000639629 RPL10LQ96L21 214 aaKnown RBP0.54□□□□□ -2.32
CCDC7-215ENST00000639629 VTI1BQ9UEU0 232 aa0.54□□□□□ -2.32
CCDC7-215ENST00000639629 TBX22Q9Y458 520 aa0.54□□□□□ -2.32
CCDC7-215ENST00000639629 COL16A1Q07092 1604 aaPredicted RBP0.54□□□□□ -2.32
CCDC7-215ENST00000639629 MUC16Q8WXI7 14507 aa0.54□□□□□ -2.32
CCDC7-215ENST00000639629 B4E1Z4 1266 aa0.54□□□□□ -2.32
CCDC7-215ENST00000639629 FAM47E-STBD1D6RA91 191 aa0.54□□□□□ -2.32
CCDC7-215ENST00000639629 SGTAO43765 313 aa0.54□□□□□ -2.32
CCDC7-215ENST00000639629 SMARCA5O60264 1052 aaPredicted RBP0.54□□□□□ -2.32
CCDC7-215ENST00000639629 FUCA1P04066 466 aa0.54□□□□□ -2.32
CCDC7-215ENST00000639629 SLC6A9P48067 706 aa0.54□□□□□ -2.32
CCDC7-215ENST00000639629 PAK1Q13153 545 aa0.54□□□□□ -2.32
CCDC7-215ENST00000639629 MST1LQ2TV78 715 aa0.54□□□□□ -2.32
CCDC7-215ENST00000639629 ZCCHC8Q6NZY4 707 aaKnown RBP0.54□□□□□ -2.32
CCDC7-215ENST00000639629 RBM23Q86U06 439 aaKnown RBP0.54□□□□□ -2.32
CCDC7-215ENST00000639629 THNSL2Q86YJ6 484 aa0.54□□□□□ -2.32
CCDC7-215ENST00000639629 ADGRG2Q8IZP9 1017 aa0.54□□□□□ -2.32
CCDC7-215ENST00000639629 EFHBQ8N7U6 833 aa0.54□□□□□ -2.32
CCDC7-215ENST00000639629 PLA2G12BQ9BX93 195 aa0.54□□□□□ -2.32
CCDC7-215ENST00000639629 SLC52A2Q9HAB3 445 aa0.54□□□□□ -2.32
CCDC7-215ENST00000639629 CALCOCO1Q9P1Z2 691 aa0.54□□□□□ -2.32
CCDC7-215ENST00000639629 RAI2Q9Y5P3 530 aa0.54□□□□□ -2.32
CCDC7-215ENST00000639629 TRBV23-1A0A0A0MS06 115 aa0.54□□□□□ -2.32
CCDC7-215ENST00000639629 NPEPPSL1A6NEC2 478 aa0.54□□□□□ -2.32
CCDC7-215ENST00000639629 DHHO43323 396 aa0.54□□□□□ -2.32
CCDC7-215ENST00000639629 FDXRP22570 491 aa0.54□□□□□ -2.32
CCDC7-215ENST00000639629 PXNP49023 591 aaPredicted RBP0.54□□□□□ -2.32
CCDC7-215ENST00000639629 SEC24CP53992 1094 aa0.54□□□□□ -2.32
CCDC7-215ENST00000639629 PTH1RQ03431 593 aa0.54□□□□□ -2.32
CCDC7-215ENST00000639629 MGAT2Q10469 447 aa0.54□□□□□ -2.32
CCDC7-215ENST00000639629 MAN2A1Q16706 1144 aa0.54□□□□□ -2.32
CCDC7-215ENST00000639629 CLEC16AQ2KHT3 1053 aa0.54□□□□□ -2.32
CCDC7-215ENST00000639629 BICRALQ6AI39 1079 aa0.54□□□□□ -2.32
CCDC7-215ENST00000639629 ZNF425Q6IV72 752 aa0.54□□□□□ -2.32
CCDC7-215ENST00000639629 VWA1Q6PCB0 445 aa0.54□□□□□ -2.32
CCDC7-215ENST00000639629 KCNT2Q6UVM3 1135 aa0.54□□□□□ -2.32
CCDC7-215ENST00000639629 C6orf15Q6UXA7 325 aaPredicted RBP0.54□□□□□ -2.32
CCDC7-215ENST00000639629 SMC1BQ8NDV3 1235 aa0.54□□□□□ -2.32
CCDC7-215ENST00000639629 CTHRC1Q96CG8 243 aa0.54□□□□□ -2.32
CCDC7-215ENST00000639629 ZNF512BQ96KM6 892 aaPredicted RBP0.54□□□□□ -2.32
CCDC7-215ENST00000639629 PPP1R10Q96QC0 940 aaKnown RBP0.54□□□□□ -2.32
CCDC7-215ENST00000639629 CPEB1Q9BZB8 566 aaKnown RBP0.54□□□□□ -2.32
CCDC7-215ENST00000639629 TINAGL1Q9GZM7 467 aaPredicted RBP0.54□□□□□ -2.32
CCDC7-215ENST00000639629 MKRN2Q9H000 416 aaKnown RBP0.54□□□□□ -2.32
CCDC7-215ENST00000639629 VPS11Q9H270 941 aa0.54□□□□□ -2.32
CCDC7-215ENST00000639629 C14orf93Q9H972 538 aaKnown RBP0.54□□□□□ -2.32
CCDC7-215ENST00000639629 MAGEC2Q9UBF1 373 aaPredicted RBP0.54□□□□□ -2.32
CCDC7-215ENST00000639629 DSEQ9UL01 958 aa0.54□□□□□ -2.32
CCDC7-215ENST00000639629 NEU2Q9Y3R4 380 aa0.54□□□□□ -2.32
CCDC7-215ENST00000639629 ANXA1P04083 346 aa0.53□□□□□ -2.32
CCDC7-215ENST00000639629 ATF7P17544 494 aaPredicted RBP0.53□□□□□ -2.32
CCDC7-215ENST00000639629 CD83Q01151 205 aa0.53□□□□□ -2.32
CCDC7-215ENST00000639629 PPP3CAQ08209 521 aa0.53□□□□□ -2.32
CCDC7-215ENST00000639629 FOXI1Q12951 378 aa0.53□□□□□ -2.32
CCDC7-215ENST00000639629 GRM7Q14831 915 aa0.53□□□□□ -2.32
CCDC7-215ENST00000639629 ZNF169Q14929 603 aaPredicted RBP0.53□□□□□ -2.32
CCDC7-215ENST00000639629 SLC14A2Q15849 920 aa0.53□□□□□ -2.32
CCDC7-215ENST00000639629 GNPTABQ3T906 1256 aa0.53□□□□□ -2.32
CCDC7-215ENST00000639629 DALRD3Q5D0E6 543 aaKnown RBP0.53□□□□□ -2.32
CCDC7-215ENST00000639629 FAM47AQ5JRC9 791 aa0.53□□□□□ -2.32
CCDC7-215ENST00000639629 TTLL5Q6EMB2 1281 aa0.53□□□□□ -2.32
CCDC7-215ENST00000639629 KRTAP5-10Q6L8G5 202 aa0.53□□□□□ -2.32
CCDC7-215ENST00000639629 MTHFD1LQ6UB35 978 aa0.53□□□□□ -2.32
CCDC7-215ENST00000639629 BCAS4Q8TDM0 211 aa0.53□□□□□ -2.32
CCDC7-215ENST00000639629 SNX33Q8WV41 574 aa0.53□□□□□ -2.32
CCDC7-215ENST00000639629 RNPC3Q96LT9 517 aaKnown RBP0.53□□□□□ -2.32
CCDC7-215ENST00000639629 HNRNPABQ99729 332 aaKnown RBP0.53□□□□□ -2.32
CCDC7-215ENST00000639629 RLIMQ9NVW2 624 aa0.53□□□□□ -2.32
CCDC7-215ENST00000639629 CTTNBP2NLQ9P2B4 639 aa0.53□□□□□ -2.32
CCDC7-215ENST00000639629 PPARGC1AQ9UBK2 798 aaKnown RBP0.53□□□□□ -2.32
CCDC7-215ENST00000639629 ST6GALNAC2Q9UJ37 374 aa0.53□□□□□ -2.32
CCDC7-215ENST00000639629 ING1Q9UK53 422 aaPredicted RBP0.53□□□□□ -2.32
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms