RNA–Protein interactions for RNA: ENST00000638959.1

LMBR1-222, Transcript of limb development membrane protein 1, humanhuman

TSL 5 BASIC

Gene LMBR1, Length 93 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-222ENST00000638959 USP53Q70EK8 1073 aa1.92□□□□□ -2.1
LMBR1-222ENST00000638959 SLC7A14Q8TBB6 771 aa1.92□□□□□ -2.1
LMBR1-222ENST00000638959 ADAM2Q99965 735 aa1.92□□□□□ -2.1
LMBR1-222ENST00000638959 HEPHQ9BQS7 1158 aa1.92□□□□□ -2.1
LMBR1-222ENST00000638959 HAPLN2Q9GZV7 340 aa1.92□□□□□ -2.1
LMBR1-222ENST00000638959 SAE1Q9UBE0 346 aaPredicted RBP1.92□□□□□ -2.1
LMBR1-222ENST00000638959 MAGEL2Q9UJ55 1249 aa1.92□□□□□ -2.1
LMBR1-222ENST00000638959 PROCRQ9UNN8 238 aa1.92□□□□□ -2.1
LMBR1-222ENST00000638959 SRPK3Q9UPE1 567 aa1.92□□□□□ -2.1
LMBR1-222ENST00000638959 ATP23Q9Y6H3 246 aa1.92□□□□□ -2.1
LMBR1-222ENST00000638959 TCRBV5S4A2TA0A5A2 114 aa1.91□□□□□ -2.1
LMBR1-222ENST00000638959 FAM47E-STBD1D6RA91 191 aa1.91□□□□□ -2.1
LMBR1-222ENST00000638959 BRD1O95696 1058 aa1.91□□□□□ -2.1
LMBR1-222ENST00000638959 SOD2P04179 222 aa1.91□□□□□ -2.1
LMBR1-222ENST00000638959 PRKCGP05129 697 aa1.91□□□□□ -2.1
LMBR1-222ENST00000638959 JUNP05412 331 aaKnown RBP1.91□□□□□ -2.1
LMBR1-222ENST00000638959 APEX1P27695 318 aaKnown RBP1.91□□□□□ -2.1
LMBR1-222ENST00000638959 MCAMP43121 646 aa1.91□□□□□ -2.1
LMBR1-222ENST00000638959 RNASE9P60153 205 aaKnown RBP1.91□□□□□ -2.1
LMBR1-222ENST00000638959 HERVK_113P62684 666 aa1.91□□□□□ -2.1
LMBR1-222ENST00000638959 MRPS35P82673 323 aaKnown RBP1.91□□□□□ -2.1
LMBR1-222ENST00000638959 BMT2Q1RMZ1 405 aa1.91□□□□□ -2.1
LMBR1-222ENST00000638959 KRT71Q3SY84 523 aa1.91□□□□□ -2.1
LMBR1-222ENST00000638959 LBX2Q6XYB7 198 aa1.91□□□□□ -2.1
LMBR1-222ENST00000638959 Q6ZNX1 250 aa1.91□□□□□ -2.1
LMBR1-222ENST00000638959 CMTM4Q8IZR5 234 aa1.91□□□□□ -2.1
LMBR1-222ENST00000638959 GLB1L3Q8NCI6 653 aaPredicted RBP1.91□□□□□ -2.1
LMBR1-222ENST00000638959 ACTRT2Q8TDY3 377 aa1.91□□□□□ -2.1
LMBR1-222ENST00000638959 DENND1AQ8TEH3 1009 aa1.91□□□□□ -2.1
LMBR1-222ENST00000638959 Q96MF0 132 aa1.91□□□□□ -2.1
LMBR1-222ENST00000638959 TEX101Q9BY14 249 aa1.91□□□□□ -2.1
LMBR1-222ENST00000638959 CPEB1Q9BZB8 566 aaKnown RBP1.91□□□□□ -2.1
LMBR1-222ENST00000638959 NRIP3Q9NQ35 241 aa1.91□□□□□ -2.1
LMBR1-222ENST00000638959 FOXJ2Q9P0K8 574 aa1.91□□□□□ -2.1
LMBR1-222ENST00000638959 WDR3Q9UNX4 943 aaKnown RBP eCLIP1.91□□□□□ -2.1
LMBR1-222ENST00000638959 MAP3K2Q9Y2U5 619 aa1.91□□□□□ -2.1
LMBR1-222ENST00000638959 IVNS1ABPQ9Y6Y0 642 aa1.91□□□□□ -2.1
LMBR1-222ENST00000638959 NOTCH4Q99466 2003 aa1.9□□□□□ -2.11
LMBR1-222ENST00000638959 LEFTY2O00292 366 aa1.9□□□□□ -2.11
LMBR1-222ENST00000638959 CLASP2O75122 1294 aaKnown RBP1.9□□□□□ -2.11
LMBR1-222ENST00000638959 SPATA31D3P0C874 917 aa1.9□□□□□ -2.11
LMBR1-222ENST00000638959 KELP23276 732 aa1.9□□□□□ -2.11
LMBR1-222ENST00000638959 ZNF134P52741 427 aa1.9□□□□□ -2.11
LMBR1-222ENST00000638959 MXRA7P84157 204 aa1.9□□□□□ -2.11
LMBR1-222ENST00000638959 METTL24Q5JXM2 366 aa1.9□□□□□ -2.11
LMBR1-222ENST00000638959 DGKKQ5KSL6 1271 aa1.9□□□□□ -2.11
LMBR1-222ENST00000638959 SPATA31D4Q6ZUB0 917 aa1.9□□□□□ -2.11
LMBR1-222ENST00000638959 FOXP4Q8IVH2 680 aaPredicted RBP1.9□□□□□ -2.11
LMBR1-222ENST00000638959 PLA2G15Q8NCC3 412 aa1.9□□□□□ -2.11
LMBR1-222ENST00000638959 OR52N2Q8NGI0 321 aa1.9□□□□□ -2.11
LMBR1-222ENST00000638959 OR6P1Q8NGX9 317 aa1.9□□□□□ -2.11
LMBR1-222ENST00000638959 CALML6Q8TD86 181 aa1.9□□□□□ -2.11
LMBR1-222ENST00000638959 UROC1Q96N76 676 aa1.9□□□□□ -2.11
LMBR1-222ENST00000638959 BHMT2Q9H2M3 363 aa1.9□□□□□ -2.11
LMBR1-222ENST00000638959 FLRT1Q9NZU1 646 aa1.9□□□□□ -2.11
LMBR1-222ENST00000638959 DIRC3C9JPN6 131 aa1.89□□□□□ -2.11
LMBR1-222ENST00000638959 WNT9AO14904 365 aa1.89□□□□□ -2.11
LMBR1-222ENST00000638959 C4BPAP04003 597 aaKnown RBP1.89□□□□□ -2.11
LMBR1-222ENST00000638959 MMEP08473 750 aa1.89□□□□□ -2.11
LMBR1-222ENST00000638959 PRKCSHP14314 528 aaPredicted RBP1.89□□□□□ -2.11
LMBR1-222ENST00000638959 GPD1P21695 349 aa1.89□□□□□ -2.11
LMBR1-222ENST00000638959 GIPRP48546 466 aa1.89□□□□□ -2.11
LMBR1-222ENST00000638959 HILS1P60008 231 aa1.89□□□□□ -2.11
LMBR1-222ENST00000638959 RESTQ13127 1097 aa1.89□□□□□ -2.11
LMBR1-222ENST00000638959 FIGNQ5HY92 759 aa1.89□□□□□ -2.11
LMBR1-222ENST00000638959 RSPO2Q6UXX9 243 aaPredicted RBP1.89□□□□□ -2.11
LMBR1-222ENST00000638959 ARHGAP36Q6ZRI8 547 aa1.89□□□□□ -2.11
LMBR1-222ENST00000638959 FAM83AQ86UY5 434 aa1.89□□□□□ -2.11
LMBR1-222ENST00000638959 RBMXL3Q8N7X1 1067 aaKnown RBP1.89□□□□□ -2.11
LMBR1-222ENST00000638959 HIPK4Q8NE63 616 aa1.89□□□□□ -2.11
LMBR1-222ENST00000638959 ACRBPQ8NEB7 543 aa1.89□□□□□ -2.11
LMBR1-222ENST00000638959 SEMA6DQ8NFY4 1073 aa1.89□□□□□ -2.11
LMBR1-222ENST00000638959 KCTD13Q8WZ19 329 aa1.89□□□□□ -2.11
LMBR1-222ENST00000638959 IPPKQ9H8X2 491 aa1.89□□□□□ -2.11
LMBR1-222ENST00000638959 CPNE5Q9HCH3 593 aa1.89□□□□□ -2.11
LMBR1-222ENST00000638959 ACSS2Q9NR19 701 aa1.89□□□□□ -2.11
LMBR1-222ENST00000638959 HDAC5Q9UQL6 1122 aa1.89□□□□□ -2.11
LMBR1-222ENST00000638959 BTBD3Q9Y2F9 522 aa1.89□□□□□ -2.11
LMBR1-222ENST00000638959 PRAMEF22A3QJZ6 481 aa1.88□□□□□ -2.11
LMBR1-222ENST00000638959 PPEF2O14830 753 aa1.88□□□□□ -2.11
LMBR1-222ENST00000638959 DNAJC6O75061 913 aa1.88□□□□□ -2.11
LMBR1-222ENST00000638959 MAFO75444 373 aaPredicted RBP1.88□□□□□ -2.11
LMBR1-222ENST00000638959 CDKL5O76039 1030 aa1.88□□□□□ -2.11
LMBR1-222ENST00000638959 FOSP01100 380 aaPredicted RBP1.88□□□□□ -2.11
LMBR1-222ENST00000638959 ZSCAN20P17040 1043 aaPredicted RBP1.88□□□□□ -2.11
LMBR1-222ENST00000638959 NHLH2Q02577 135 aa1.88□□□□□ -2.11
LMBR1-222ENST00000638959 MAP4K2Q12851 820 aa1.88□□□□□ -2.11
LMBR1-222ENST00000638959 NCAPHQ15003 741 aa1.88□□□□□ -2.11
LMBR1-222ENST00000638959 LLGL1Q15334 1064 aa1.88□□□□□ -2.11
LMBR1-222ENST00000638959 PDCD4Q53EL6 469 aaKnown RBP1.88□□□□□ -2.11
LMBR1-222ENST00000638959 MORN5Q5VZ52 161 aa1.88□□□□□ -2.11
LMBR1-222ENST00000638959 GSG1LQ6UXU4 331 aa1.88□□□□□ -2.11
LMBR1-222ENST00000638959 MAMDC2Q7Z304 686 aaPredicted RBP1.88□□□□□ -2.11
LMBR1-222ENST00000638959 CLEC14AQ86T13 490 aa1.88□□□□□ -2.11
LMBR1-222ENST00000638959 PTRH1Q86Y79 214 aaKnown RBP1.88□□□□□ -2.11
LMBR1-222ENST00000638959 FBXO18Q8NFZ0 1043 aa1.88□□□□□ -2.11
LMBR1-222ENST00000638959 SARAFQ96BY9 339 aa1.88□□□□□ -2.11
LMBR1-222ENST00000638959 HMCESQ96FZ2 354 aa1.88□□□□□ -2.11
LMBR1-222ENST00000638959 PDLIM2Q96JY6 352 aa1.88□□□□□ -2.11
LMBR1-222ENST00000638959 PDCD2LQ9BRP1 358 aa1.88□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms