RNA–Protein interactions for RNA: ENST00000638952.1

HNRNPU-217, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

TSL 5

Gene HNRNPU, Length 5,678 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-217ENST00000638952 SLC44A5Q8NCS7 719 aa18.34■□□□□ 0.53
HNRNPU-217ENST00000638952 FLAD1Q8NFF5 587 aa18.34■□□□□ 0.53
HNRNPU-217ENST00000638952 HEXIM2Q96MH2 286 aaKnown RBP18.34■□□□□ 0.53
HNRNPU-217ENST00000638952 PPP1R16BQ96T49 567 aa18.34■□□□□ 0.53
HNRNPU-217ENST00000638952 MRPL40Q9NQ50 206 aaKnown RBP18.34■□□□□ 0.53
HNRNPU-217ENST00000638952 NOC2LQ9Y3T9 749 aaKnown RBP18.34■□□□□ 0.53
HNRNPU-217ENST00000638952 MIF4GDA9UHW6 222 aaKnown RBP18.34■□□□□ 0.53
HNRNPU-217ENST00000638952 PSMA2P25787 234 aa18.34■□□□□ 0.53
HNRNPU-217ENST00000638952 NLGN1Q8N2Q7 840 aa18.34■□□□□ 0.53
HNRNPU-217ENST00000638952 USP17L15C9J2P7 530 aa18.34■□□□□ 0.53
HNRNPU-217ENST00000638952 USP17L13C9JLJ4 530 aa18.34■□□□□ 0.53
HNRNPU-217ENST00000638952 USP17L11C9JVI0 530 aa18.34■□□□□ 0.53
HNRNPU-217ENST00000638952 USP17L18D6R9N7 530 aa18.34■□□□□ 0.53
HNRNPU-217ENST00000638952 USP17L22D6RA61 530 aa18.34■□□□□ 0.53
HNRNPU-217ENST00000638952 USP17L17D6RBQ6 530 aa18.34■□□□□ 0.53
HNRNPU-217ENST00000638952 USP17L19D6RCP7 530 aa18.34■□□□□ 0.53
HNRNPU-217ENST00000638952 USP17L20D6RJB6 530 aa18.34■□□□□ 0.53
HNRNPU-217ENST00000638952 USP17L24Q0WX57 530 aa18.34■□□□□ 0.53
HNRNPU-217ENST00000638952 USP17L6PQ6QN14 398 aa18.34■□□□□ 0.53
HNRNPU-217ENST00000638952 C7orf31Q8N865 590 aa18.34■□□□□ 0.53
HNRNPU-217ENST00000638952 DCAF4Q8WV16 495 aa18.34■□□□□ 0.53
HNRNPU-217ENST00000638952 MLXIPLQ9NP71 852 aa18.34■□□□□ 0.53
HNRNPU-217ENST00000638952 DCP1AQ9NPI6 582 aaPredicted RBP18.34■□□□□ 0.53
HNRNPU-217ENST00000638952 CPDO75976 1380 aa18.34■□□□□ 0.53
HNRNPU-217ENST00000638952 SLC4A1P02730 911 aa18.34■□□□□ 0.53
HNRNPU-217ENST00000638952 ABCD1P33897 745 aa18.34■□□□□ 0.53
HNRNPU-217ENST00000638952 GCLMP48507 274 aa18.34■□□□□ 0.53
HNRNPU-217ENST00000638952 ZBTB18Q99592 522 aa18.34■□□□□ 0.53
HNRNPU-217ENST00000638952 BUD13Q9BRD0 619 aaKnown RBP eCLIP18.34■□□□□ 0.536e-10■■■□□ 17.3
HNRNPU-217ENST00000638952 SERPINB10P48595 397 aa18.33■□□□□ 0.53
HNRNPU-217ENST00000638952 FMR1Q06787 632 aaKnown RBP eCLIP18.33■□□□□ 0.537e-12■□□□□ 10.3
HNRNPU-217ENST00000638952 ALX1Q15699 326 aa18.33■□□□□ 0.53
HNRNPU-217ENST00000638952 CDO1Q16878 200 aa18.33■□□□□ 0.53
HNRNPU-217ENST00000638952 RINLQ6ZS11 566 aa18.33■□□□□ 0.53
HNRNPU-217ENST00000638952 SLC26A7Q8TE54 656 aa18.33■□□□□ 0.53
HNRNPU-217ENST00000638952 KIF9Q9HAQ2 790 aa18.33■□□□□ 0.53
HNRNPU-217ENST00000638952 SLC5A4Q9NY91 659 aa18.33■□□□□ 0.53
HNRNPU-217ENST00000638952 ABCA6Q8N139 1617 aa18.33■□□□□ 0.53
HNRNPU-217ENST00000638952 PALLDQ8WX93 1383 aa18.33■□□□□ 0.53
HNRNPU-217ENST00000638952 CTIFO43310 598 aaKnown RBP18.33■□□□□ 0.53
HNRNPU-217ENST00000638952 TJP3O95049 919 aa18.33■□□□□ 0.53
HNRNPU-217ENST00000638952 ATP2C1P98194 919 aaPredicted RBP18.33■□□□□ 0.53
HNRNPU-217ENST00000638952 SPOUT1Q5T280 376 aaKnown RBP18.33■□□□□ 0.53
HNRNPU-217ENST00000638952 KLC3Q6P597 504 aa18.33■□□□□ 0.53
HNRNPU-217ENST00000638952 ACAD11Q709F0 780 aa18.33■□□□□ 0.53
HNRNPU-217ENST00000638952 PDIK1LQ8N165 341 aa18.33■□□□□ 0.53
HNRNPU-217ENST00000638952 IRX2Q9BZI1 471 aaPredicted RBP18.33■□□□□ 0.53
HNRNPU-217ENST00000638952 CHCHD3Q9NX63 227 aaKnown RBP18.33■□□□□ 0.53
HNRNPU-217ENST00000638952 STXBP3O00186 592 aa18.33■□□□□ 0.52
HNRNPU-217ENST00000638952 TBC1D9BQ66K14 1250 aa18.33■□□□□ 0.52
HNRNPU-217ENST00000638952 ERICH1Q86X53 443 aa18.33■□□□□ 0.52
HNRNPU-217ENST00000638952 DDX42Q86XP3 938 aaKnown RBP eCLIP18.33■□□□□ 0.528e-7■■□□□ 11.8
HNRNPU-217ENST00000638952 PASD1Q8IV76 773 aa18.33■□□□□ 0.52
HNRNPU-217ENST00000638952 ZNF233A6NK53 670 aa18.33■□□□□ 0.52
HNRNPU-217ENST00000638952 ZNF185O15231 689 aa18.33■□□□□ 0.52
HNRNPU-217ENST00000638952 SCARF1Q14162 830 aa18.33■□□□□ 0.52
HNRNPU-217ENST00000638952 FAM182BQ5T319 152 aa18.33■□□□□ 0.52
HNRNPU-217ENST00000638952 FAF2Q96CS3 445 aa18.33■□□□□ 0.52
HNRNPU-217ENST00000638952 BTBD6Q96KE9 485 aa18.33■□□□□ 0.52
HNRNPU-217ENST00000638952 ATP6V1G3Q96LB4 118 aa18.33■□□□□ 0.52
HNRNPU-217ENST00000638952 TAF1DQ9H5J8 278 aaPredicted RBP18.33■□□□□ 0.52
HNRNPU-217ENST00000638952 BARHL2Q9NY43 387 aa18.33■□□□□ 0.52
HNRNPU-217ENST00000638952 DCTN4Q9UJW0 460 aa18.33■□□□□ 0.52
HNRNPU-217ENST00000638952 ZNF609O15014 1411 aa18.33■□□□□ 0.52
HNRNPU-217ENST00000638952 USP17L10C9JJH3 530 aa18.32■□□□□ 0.52
HNRNPU-217ENST00000638952 KRT37O76014 449 aa18.32■□□□□ 0.52
HNRNPU-217ENST00000638952 GNL1P36915 607 aaPredicted RBP18.32■□□□□ 0.52
HNRNPU-217ENST00000638952 KCTD2Q14681 263 aa18.32■□□□□ 0.52
HNRNPU-217ENST00000638952 RFX8Q6ZV50 586 aa18.32■□□□□ 0.52
HNRNPU-217ENST00000638952 EXT2Q93063 718 aa18.32■□□□□ 0.52
HNRNPU-217ENST00000638952 KIF17Q9P2E2 1029 aa18.32■□□□□ 0.52
HNRNPU-217ENST00000638952 ZBED1O96006 694 aa18.32■□□□□ 0.52
HNRNPU-217ENST00000638952 STAT3P40763 770 aa18.32■□□□□ 0.52
HNRNPU-217ENST00000638952 KLC2Q9H0B6 622 aa18.32■□□□□ 0.52
HNRNPU-217ENST00000638952 ARHGAP26Q9UNA1 814 aa18.32■□□□□ 0.52
HNRNPU-217ENST00000638952 MINPP1Q9UNW1 487 aa18.32■□□□□ 0.52
HNRNPU-217ENST00000638952 PNPLA6Q8IY17 1366 aa18.32■□□□□ 0.52
HNRNPU-217ENST00000638952 A0A1W2PQC6 194 aa18.32■□□□□ 0.52
HNRNPU-217ENST00000638952 PRELPP51888 382 aa18.32■□□□□ 0.52
HNRNPU-217ENST00000638952 KNOP1Q1ED39 458 aaKnown RBP18.32■□□□□ 0.52
HNRNPU-217ENST00000638952 NUP85Q9BW27 656 aa18.32■□□□□ 0.52
HNRNPU-217ENST00000638952 TBC1D23Q9NUY8 699 aa18.32■□□□□ 0.52
HNRNPU-217ENST00000638952 CDHR2Q9BYE9 1310 aa18.32■□□□□ 0.52
HNRNPU-217ENST00000638952 USP42Q9H9J4 1324 aaKnown RBP18.32■□□□□ 0.52
HNRNPU-217ENST00000638952 GOLGA8MH3BSY2 632 aa18.32■□□□□ 0.52
HNRNPU-217ENST00000638952 ELF1P32519 619 aa18.32■□□□□ 0.52
HNRNPU-217ENST00000638952 CAPRIN1Q14444 709 aaKnown RBP18.32■□□□□ 0.52
HNRNPU-217ENST00000638952 CYTH1Q15438 398 aa18.32■□□□□ 0.52
HNRNPU-217ENST00000638952 CNPY4Q8N129 248 aa18.32■□□□□ 0.52
HNRNPU-217ENST00000638952 BBS5Q8N3I7 341 aa18.32■□□□□ 0.52
HNRNPU-217ENST00000638952 INTS2Q9H0H0 1204 aaKnown RBP18.32■□□□□ 0.52
HNRNPU-217ENST00000638952 ALKQ9UM73 1620 aa18.32■□□□□ 0.52
HNRNPU-217ENST00000638952 RARS2Q5T160 578 aaKnown RBP18.32■□□□□ 0.52
HNRNPU-217ENST00000638952 SGMS1Q86VZ5 419 aa18.32■□□□□ 0.52
HNRNPU-217ENST00000638952 PARD3BQ8TEW8 1205 aa18.32■□□□□ 0.52
HNRNPU-217ENST00000638952 FAM96AQ9H5X1 160 aa18.32■□□□□ 0.52
HNRNPU-217ENST00000638952 AXIN2Q9Y2T1 843 aa18.32■□□□□ 0.52
HNRNPU-217ENST00000638952 TARSL2A2RTX5 802 aaKnown RBP18.31■□□□□ 0.52
HNRNPU-217ENST00000638952 MXD3Q9BW11 206 aa18.31■□□□□ 0.52
HNRNPU-217ENST00000638952 ADA2Q9NZK5 511 aa18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms