RNA–Protein interactions for RNA: ENST00000638372.1

SCARB2-208, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 4,811 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-208ENST00000638372 MT-ND3P03897 115 aa15.37■□□□□ 0.05
SCARB2-208ENST00000638372 CD44P16070 742 aaKnown RBP15.37■□□□□ 0.05
SCARB2-208ENST00000638372 GNA15P30679 374 aa15.37■□□□□ 0.05
SCARB2-208ENST00000638372 ACOT2P49753 483 aa15.37■□□□□ 0.05
SCARB2-208ENST00000638372 TSNAXIP1Q2TAA8 658 aa15.37■□□□□ 0.05
SCARB2-208ENST00000638372 SPATA24Q86W54 205 aa15.37■□□□□ 0.05
SCARB2-208ENST00000638372 RNF149Q8NC42 400 aa15.37■□□□□ 0.05
SCARB2-208ENST00000638372 RFFLQ8WZ73 363 aa15.37■□□□□ 0.05
SCARB2-208ENST00000638372 TMEM143Q96AN5 459 aa15.37■□□□□ 0.05
SCARB2-208ENST00000638372 MS4A14Q96JA4 679 aa15.37■□□□□ 0.05
SCARB2-208ENST00000638372 SPATA33Q96N06 139 aa15.37■□□□□ 0.05
SCARB2-208ENST00000638372 AK9Q5TCS8 1911 aa15.37■□□□□ 0.05
SCARB2-208ENST00000638372 ECE1P42892 770 aa15.37■□□□□ 0.05
SCARB2-208ENST00000638372 SLC18A3Q16572 532 aa15.37■□□□□ 0.05
SCARB2-208ENST00000638372 PLA2G4FQ68DD2 849 aa15.37■□□□□ 0.05
SCARB2-208ENST00000638372 LMNTD2Q8IXW0 634 aa15.37■□□□□ 0.05
SCARB2-208ENST00000638372 CERKQ8TCT0 537 aa15.37■□□□□ 0.05
SCARB2-208ENST00000638372 ACER1Q8TDN7 264 aa15.37■□□□□ 0.05
SCARB2-208ENST00000638372 PRMT6Q96LA8 375 aaPredicted RBP15.37■□□□□ 0.05
SCARB2-208ENST00000638372 LRRC1Q9BTT6 524 aa15.37■□□□□ 0.05
SCARB2-208ENST00000638372 GINM1Q9NU53 330 aa15.37■□□□□ 0.05
SCARB2-208ENST00000638372 SNX12Q9UMY4 172 aa15.37■□□□□ 0.05
SCARB2-208ENST00000638372 HEY1Q9Y5J3 304 aa15.37■□□□□ 0.05
SCARB2-208ENST00000638372 OATP04181 439 aa15.36■□□□□ 0.05
SCARB2-208ENST00000638372 FDX1P10109 184 aa15.36■□□□□ 0.05
SCARB2-208ENST00000638372 SESN3P58005 492 aa15.36■□□□□ 0.05
SCARB2-208ENST00000638372 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.36■□□□□ 0.05
SCARB2-208ENST00000638372 EPB41L3Q9Y2J2 1087 aaPredicted RBP15.36■□□□□ 0.05
SCARB2-208ENST00000638372 FHOD1Q9Y613 1164 aa15.36■□□□□ 0.05
SCARB2-208ENST00000638372 SPDYE16A6NNV3 312 aaPredicted RBP15.36■□□□□ 0.05
SCARB2-208ENST00000638372 WDR46O15213 610 aaKnown RBP15.36■□□□□ 0.05
SCARB2-208ENST00000638372 CSPG5O95196 566 aa15.36■□□□□ 0.05
SCARB2-208ENST00000638372 RPA1P27694 616 aa15.36■□□□□ 0.05
SCARB2-208ENST00000638372 PHKA2P46019 1235 aa15.36■□□□□ 0.05
SCARB2-208ENST00000638372 KCNJ6P48051 423 aa15.36■□□□□ 0.05
SCARB2-208ENST00000638372 NPEPPSP55786 919 aa15.36■□□□□ 0.05
SCARB2-208ENST00000638372 EIF3BP55884 814 aaKnown RBP15.36■□□□□ 0.05
SCARB2-208ENST00000638372 SPDYE2Q495Y8 402 aa15.36■□□□□ 0.05
SCARB2-208ENST00000638372 HP1BP3Q5SSJ5 553 aaPredicted RBP15.36■□□□□ 0.05
SCARB2-208ENST00000638372 RAPH1Q70E73 1250 aa15.36■□□□□ 0.05
SCARB2-208ENST00000638372 SAMD7Q7Z3H4 446 aa15.36■□□□□ 0.05
SCARB2-208ENST00000638372 SAYSD1Q9NPB0 183 aa15.36■□□□□ 0.05
SCARB2-208ENST00000638372 HPSEQ9Y251 543 aa15.36■□□□□ 0.05
SCARB2-208ENST00000638372 NOC2LQ9Y3T9 749 aaKnown RBP15.36■□□□□ 0.05
SCARB2-208ENST00000638372 GOLGA8MH3BSY2 632 aa15.36■□□□□ 0.05
SCARB2-208ENST00000638372 TBX3O15119 743 aa15.36■□□□□ 0.05
SCARB2-208ENST00000638372 TJP3O95049 919 aa15.36■□□□□ 0.05
SCARB2-208ENST00000638372 C4orf50Q6ZRC1 276 aa15.36■□□□□ 0.05
SCARB2-208ENST00000638372 SMARCAL1Q9NZC9 954 aa15.36■□□□□ 0.05
SCARB2-208ENST00000638372 FNDC3AQ9Y2H6 1198 aaKnown RBP15.36■□□□□ 0.05
SCARB2-208ENST00000638372 MST1RQ04912 1400 aa15.36■□□□□ 0.05
SCARB2-208ENST00000638372 TCRBV5S4A2TA0A5A2 114 aa15.36■□□□□ 0.05
SCARB2-208ENST00000638372 HMGB1P1B2RPK0 211 aaPredicted RBP15.36■□□□□ 0.05
SCARB2-208ENST00000638372 GSTA1P08263 222 aa15.36■□□□□ 0.05
SCARB2-208ENST00000638372 GSTA2P09210 222 aa15.36■□□□□ 0.05
SCARB2-208ENST00000638372 STAT5BP51692 787 aa15.36■□□□□ 0.05
SCARB2-208ENST00000638372 HNRNPH2P55795 449 aaKnown RBP15.36■□□□□ 0.05
SCARB2-208ENST00000638372 RCN2Q14257 317 aa15.36■□□□□ 0.05
SCARB2-208ENST00000638372 TTLL4Q14679 1199 aa15.36■□□□□ 0.05
SCARB2-208ENST00000638372 NUGGCQ68CJ6 796 aa15.36■□□□□ 0.05
SCARB2-208ENST00000638372 DSTYKQ6XUX3 929 aa15.36■□□□□ 0.05
SCARB2-208ENST00000638372 ARMCX2Q7L311 632 aa15.36■□□□□ 0.05
SCARB2-208ENST00000638372 METTL23Q86XA0 190 aa15.36■□□□□ 0.05
SCARB2-208ENST00000638372 GPD1LQ8N335 351 aa15.36■□□□□ 0.05
SCARB2-208ENST00000638372 MCUQ8NE86 351 aa15.36■□□□□ 0.05
SCARB2-208ENST00000638372 LPAR1Q92633 364 aa15.36■□□□□ 0.05
SCARB2-208ENST00000638372 HAUS2Q9NVX0 235 aa15.36■□□□□ 0.05
SCARB2-208ENST00000638372 HSPBP1Q9NZL4 362 aa15.36■□□□□ 0.05
SCARB2-208ENST00000638372 ESYT2A0FGR8 921 aa15.35■□□□□ 0.05
SCARB2-208ENST00000638372 AP5Z1O43299 807 aa15.35■□□□□ 0.05
SCARB2-208ENST00000638372 TWF2Q6IBS0 349 aaKnown RBP15.35■□□□□ 0.05
SCARB2-208ENST00000638372 CATSPER3Q86XQ3 398 aa15.35■□□□□ 0.05
SCARB2-208ENST00000638372 CFAP61Q8NHU2 1237 aa15.35■□□□□ 0.05
SCARB2-208ENST00000638372 GSDMBQ8TAX9 411 aa15.35■□□□□ 0.05
SCARB2-208ENST00000638372 THOC1Q96FV9 657 aaKnown RBP15.35■□□□□ 0.05
SCARB2-208ENST00000638372 DEPDC5O75140 1603 aa15.35■□□□□ 0.05
SCARB2-208ENST00000638372 ITIH6Q6UXX5 1313 aa15.35■□□□□ 0.05
SCARB2-208ENST00000638372 EVI5O60447 810 aa15.35■□□□□ 0.05
SCARB2-208ENST00000638372 IRX4P78413 519 aa15.35■□□□□ 0.05
SCARB2-208ENST00000638372 ANGEL2Q5VTE6 544 aaKnown RBP15.35■□□□□ 0.05
SCARB2-208ENST00000638372 SLC30A5Q8TAD4 765 aa15.35■□□□□ 0.05
SCARB2-208ENST00000638372 CCDC68Q9H2F9 335 aa15.35■□□□□ 0.05
SCARB2-208ENST00000638372 MLXIPLQ9NP71 852 aa15.35■□□□□ 0.05
SCARB2-208ENST00000638372 UBE4BO95155 1302 aa15.35■□□□□ 0.05
SCARB2-208ENST00000638372 FAM205AQ6ZU69 1335 aa15.35■□□□□ 0.05
SCARB2-208ENST00000638372 ARHGEF28Q8N1W1 1705 aaKnown RBP15.35■□□□□ 0.05
SCARB2-208ENST00000638372 FMO5P49326 533 aa15.35■□□□□ 0.05
SCARB2-208ENST00000638372 GALCP54803 685 aa15.35■□□□□ 0.05
SCARB2-208ENST00000638372 FAM133BQ5BKY9 247 aaKnown RBP15.35■□□□□ 0.05
SCARB2-208ENST00000638372 CENPUQ71F23 418 aa15.35■□□□□ 0.05
SCARB2-208ENST00000638372 TRIM59Q8IWR1 403 aa15.35■□□□□ 0.05
SCARB2-208ENST00000638372 FUCA2Q9BTY2 467 aa15.35■□□□□ 0.05
SCARB2-208ENST00000638372 SLC4A1P02730 911 aa15.34■□□□□ 0.05
SCARB2-208ENST00000638372 FXR2P51116 673 aaKnown RBP eCLIP15.34■□□□□ 0.05
SCARB2-208ENST00000638372 GPC3P51654 580 aa15.34■□□□□ 0.05
SCARB2-208ENST00000638372 CCHCR1Q8TD31 782 aa15.34■□□□□ 0.05
SCARB2-208ENST00000638372 MRPL4Q9BYD3 311 aaKnown RBP15.34■□□□□ 0.05
SCARB2-208ENST00000638372 GOLPH3Q9H4A6 298 aa15.34■□□□□ 0.05
SCARB2-208ENST00000638372 TOPORSQ9NS56 1045 aaPredicted RBP15.34■□□□□ 0.05
SCARB2-208ENST00000638372 BAG2O95816 211 aa15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms