RNA–Protein interactions for RNA: ENST00000636238.1

CIITA-214, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 5

Gene CIITA, Length 498 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-214ENST00000636238 FAM167AQ96KS9 214 aa8.32□□□□□ -1.08
CIITA-214ENST00000636238 MAP7D2Q96T17 732 aa8.32□□□□□ -1.08
CIITA-214ENST00000636238 ZBP1Q9H171 429 aa8.32□□□□□ -1.08
CIITA-214ENST00000636238 GDPD2Q9HCC8 539 aa8.32□□□□□ -1.08
CIITA-214ENST00000636238 CHST12Q9NRB3 414 aa8.32□□□□□ -1.08
CIITA-214ENST00000636238 PCDHA6Q9UN73 950 aa8.32□□□□□ -1.08
CIITA-214ENST00000636238 PCDHA8Q9Y5H6 950 aa8.32□□□□□ -1.08
CIITA-214ENST00000636238 ACACBO00763 2458 aa8.32□□□□□ -1.08
CIITA-214ENST00000636238 DCHS1Q96JQ0 3298 aa8.32□□□□□ -1.08
CIITA-214ENST00000636238 CACNA1BQ00975 2339 aa8.32□□□□□ -1.08
CIITA-214ENST00000636238 WDR87Q6ZQQ6 2873 aa8.32□□□□□ -1.08
CIITA-214ENST00000636238 CNTNAP5Q8WYK1 1306 aa8.31□□□□□ -1.08
CIITA-214ENST00000636238 MEIS1O00470 390 aa8.31□□□□□ -1.08
CIITA-214ENST00000636238 PRPF3O43395 683 aaKnown RBP8.31□□□□□ -1.08
CIITA-214ENST00000636238 GPR32O75388 356 aa8.31□□□□□ -1.08
CIITA-214ENST00000636238 PRPF40AO75400 957 aaKnown RBP8.31□□□□□ -1.08
CIITA-214ENST00000636238 C22orf31O95567 290 aa8.31□□□□□ -1.08
CIITA-214ENST00000636238 CXCL14O95715 111 aa8.31□□□□□ -1.08
CIITA-214ENST00000636238 ASGR2P07307 311 aa8.31□□□□□ -1.08
CIITA-214ENST00000636238 FGFR1P11362 822 aa8.31□□□□□ -1.08
CIITA-214ENST00000636238 NCLP19338 710 aaKnown RBP8.31□□□□□ -1.08
CIITA-214ENST00000636238 EIF4BP23588 611 aaKnown RBP8.31□□□□□ -1.08
CIITA-214ENST00000636238 AKAP17AQ02040 695 aaKnown RBP8.31□□□□□ -1.08
CIITA-214ENST00000636238 DNM1Q05193 864 aaKnown RBP8.31□□□□□ -1.08
CIITA-214ENST00000636238 ZNF528Q3MIS6 628 aa8.31□□□□□ -1.08
CIITA-214ENST00000636238 RARS2Q5T160 578 aaKnown RBP8.31□□□□□ -1.08
CIITA-214ENST00000636238 LRRC55Q6ZSA7 311 aa8.31□□□□□ -1.08
CIITA-214ENST00000636238 ZNF598Q86UK7 904 aaKnown RBP8.31□□□□□ -1.08
CIITA-214ENST00000636238 CABP7Q86V35 215 aa8.31□□□□□ -1.08
CIITA-214ENST00000636238 ECHDC2Q86YB7 292 aa8.31□□□□□ -1.08
CIITA-214ENST00000636238 SMAP1Q8IYB5 467 aaPredicted RBP8.31□□□□□ -1.08
CIITA-214ENST00000636238 FLCNQ8NFG4 579 aa8.31□□□□□ -1.08
CIITA-214ENST00000636238 FBXO18Q8NFZ0 1043 aa8.31□□□□□ -1.08
CIITA-214ENST00000636238 KCNG4Q8TDN1 519 aa8.31□□□□□ -1.08
CIITA-214ENST00000636238 SLC22A17Q8WUG5 538 aa8.31□□□□□ -1.08
CIITA-214ENST00000636238 HDAC7Q8WUI4 952 aa8.31□□□□□ -1.08
CIITA-214ENST00000636238 EMILIN2Q9BXX0 1053 aa8.31□□□□□ -1.08
CIITA-214ENST00000636238 AGO4Q9HCK5 861 aaKnown RBP8.31□□□□□ -1.08
CIITA-214ENST00000636238 ZNF302Q9NR11 478 aa8.31□□□□□ -1.08
CIITA-214ENST00000636238 TBC1D22BQ9NU19 505 aa8.31□□□□□ -1.08
CIITA-214ENST00000636238 RNF19AQ9NV58 838 aa8.31□□□□□ -1.08
CIITA-214ENST00000636238 TFIP11Q9UBB9 837 aaKnown RBP8.31□□□□□ -1.08
CIITA-214ENST00000636238 FBXL21Q9UKT6 434 aa8.31□□□□□ -1.08
CIITA-214ENST00000636238 KCNJ14Q9UNX9 436 aa8.31□□□□□ -1.08
CIITA-214ENST00000636238 SSX2IPQ9Y2D8 614 aa8.31□□□□□ -1.08
CIITA-214ENST00000636238 MAFBQ9Y5Q3 323 aaPredicted RBP8.31□□□□□ -1.08
CIITA-214ENST00000636238 CEP250Q9BV73 2442 aa8.31□□□□□ -1.08
CIITA-214ENST00000636238 TPRP12270 2363 aaKnown RBP8.3□□□□□ -1.08
CIITA-214ENST00000636238 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP8.3□□□□□ -1.08
CIITA-214ENST00000636238 ZBTB42B2RXF5 422 aa8.3□□□□□ -1.08
CIITA-214ENST00000636238 BACH1O14867 736 aa8.3□□□□□ -1.08
CIITA-214ENST00000636238 SPTLC1O15269 473 aa8.3□□□□□ -1.08
CIITA-214ENST00000636238 DEXIO95424 95 aa8.3□□□□□ -1.08
CIITA-214ENST00000636238 SREBF1P36956 1147 aa8.3□□□□□ -1.08
CIITA-214ENST00000636238 MAGEA9P43362 315 aa8.3□□□□□ -1.08
CIITA-214ENST00000636238 RAB27AP51159 221 aa8.3□□□□□ -1.08
CIITA-214ENST00000636238 SETQ01105 290 aaPredicted RBP8.3□□□□□ -1.08
CIITA-214ENST00000636238 ITGB3BPQ13352 177 aaPredicted RBP8.3□□□□□ -1.08
CIITA-214ENST00000636238 TRIM29Q14134 588 aa8.3□□□□□ -1.08
CIITA-214ENST00000636238 KIZQ2M2Z5 673 aa8.3□□□□□ -1.08
CIITA-214ENST00000636238 ZNF746Q6NUN9 644 aaPredicted RBP8.3□□□□□ -1.08
CIITA-214ENST00000636238 PDXDC2PQ6P474 469 aa8.3□□□□□ -1.08
CIITA-214ENST00000636238 GPR65Q8IYL9 337 aa8.3□□□□□ -1.08
CIITA-214ENST00000636238 SIX5Q8N196 739 aa8.3□□□□□ -1.08
CIITA-214ENST00000636238 VPS52Q8N1B4 723 aa8.3□□□□□ -1.08
CIITA-214ENST00000636238 PIAS4Q8N2W9 510 aaPredicted RBP8.3□□□□□ -1.08
CIITA-214ENST00000636238 TRAPPC12Q8WVT3 735 aa8.3□□□□□ -1.08
CIITA-214ENST00000636238 WASF1Q92558 559 aa8.3□□□□□ -1.08
CIITA-214ENST00000636238 OSMRQ99650 979 aa8.3□□□□□ -1.08
CIITA-214ENST00000636238 ANP32EQ9BTT0 268 aa8.3□□□□□ -1.08
CIITA-214ENST00000636238 APOL5Q9BWW9 433 aa8.3□□□□□ -1.08
CIITA-214ENST00000636238 RNF26Q9BY78 433 aaPredicted RBP8.3□□□□□ -1.08
CIITA-214ENST00000636238 KCNK12Q9HB15 430 aa8.3□□□□□ -1.08
CIITA-214ENST00000636238 LMBRD1Q9NUN5 540 aa8.3□□□□□ -1.08
CIITA-214ENST00000636238 VPS54Q9P1Q0 977 aa8.3□□□□□ -1.08
CIITA-214ENST00000636238 EPS15L1Q9UBC2 864 aa8.3□□□□□ -1.08
CIITA-214ENST00000636238 TCEAL9Q9UHQ7 104 aa8.3□□□□□ -1.08
CIITA-214ENST00000636238 GINS2Q9Y248 185 aa8.3□□□□□ -1.08
CIITA-214ENST00000636238 ZFP37Q9Y6Q3 630 aaPredicted RBP8.3□□□□□ -1.08
CIITA-214ENST00000636238 ATG2AQ2TAZ0 1938 aa8.3□□□□□ -1.08
CIITA-214ENST00000636238 OTOGLQ3ZCN5 2332 aa8.3□□□□□ -1.08
CIITA-214ENST00000636238 VPS13AQ96RL7 3174 aa8.29□□□□□ -1.08
CIITA-214ENST00000636238 KMT2BQ9UMN6 2715 aaPredicted RBP8.29□□□□□ -1.08
CIITA-214ENST00000636238 MED19A0JLT2 244 aaPredicted RBP8.29□□□□□ -1.08
CIITA-214ENST00000636238 DDX11L8A8MPP1 907 aa8.29□□□□□ -1.08
CIITA-214ENST00000636238 PRR5-ARHGAP8B1AHC4 643 aa8.29□□□□□ -1.08
CIITA-214ENST00000636238 GOLGA6L22H0YM25 854 aa8.29□□□□□ -1.08
CIITA-214ENST00000636238 ZNF623O75123 536 aa8.29□□□□□ -1.08
CIITA-214ENST00000636238 GADD45BO75293 160 aaPredicted RBP8.29□□□□□ -1.08
CIITA-214ENST00000636238 SRFP11831 508 aa8.29□□□□□ -1.08
CIITA-214ENST00000636238 PDIA4P13667 645 aaKnown RBP8.29□□□□□ -1.08
CIITA-214ENST00000636238 DARSP14868 501 aaKnown RBP8.29□□□□□ -1.08
CIITA-214ENST00000636238 SP100P23497 879 aaPredicted RBP8.29□□□□□ -1.08
CIITA-214ENST00000636238 BCAR1P56945 870 aa8.29□□□□□ -1.08
CIITA-214ENST00000636238 ARHGAP8P85298 464 aa8.29□□□□□ -1.08
CIITA-214ENST00000636238 LETM2Q2VYF4 491 aa8.29□□□□□ -1.08
CIITA-214ENST00000636238 CLLU1OSQ5K130 101 aa8.29□□□□□ -1.08
CIITA-214ENST00000636238 GLB1LQ6UWU2 654 aa8.29□□□□□ -1.08
CIITA-214ENST00000636238 LINC01465Q8N7H1 131 aa8.29□□□□□ -1.08
CIITA-214ENST00000636238 CYP2W1Q8TAV3 490 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms