RNA–Protein interactions for RNA: ENST00000635994.1

GABRB3-218, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 5

Gene GABRB3, Length 5,192 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-218ENST00000635994 KLHL38Q2WGJ6 581 aa6.73□□□□□ -1.33
GABRB3-218ENST00000635994 ARL6IP4Q66PJ3 421 aaKnown RBP6.73□□□□□ -1.33
GABRB3-218ENST00000635994 ARHGAP18Q8N392 663 aa6.73□□□□□ -1.33
GABRB3-218ENST00000635994 PDCD6IPQ8WUM4 868 aaKnown RBP6.73□□□□□ -1.33
GABRB3-218ENST00000635994 MYCBPQ99417 103 aaPredicted RBP6.73□□□□□ -1.33
GABRB3-218ENST00000635994 ACTR5Q9H9F9 607 aaPredicted RBP6.73□□□□□ -1.33
GABRB3-218ENST00000635994 CBX8Q9HC52 389 aa6.73□□□□□ -1.33
GABRB3-218ENST00000635994 EMILIN3Q9NT22 766 aa6.73□□□□□ -1.33
GABRB3-218ENST00000635994 STK38LQ9Y2H1 464 aa6.73□□□□□ -1.33
GABRB3-218ENST00000635994 ZHX2Q9Y6X8 837 aa6.73□□□□□ -1.33
GABRB3-218ENST00000635994 PODXLO00592 558 aa6.72□□□□□ -1.33
GABRB3-218ENST00000635994 MAGEB2O15479 319 aa6.72□□□□□ -1.33
GABRB3-218ENST00000635994 ARIH2O95376 493 aa6.72□□□□□ -1.33
GABRB3-218ENST00000635994 GFAPP14136 432 aa6.72□□□□□ -1.33
GABRB3-218ENST00000635994 EIF2AK2P19525 551 aaKnown RBP6.72□□□□□ -1.33
GABRB3-218ENST00000635994 MAP3K7CLP57077 242 aa6.72□□□□□ -1.33
GABRB3-218ENST00000635994 NSUN2Q08J23 767 aaKnown RBP eCLIP6.72□□□□□ -1.33
GABRB3-218ENST00000635994 MTMR1Q13613 665 aa6.72□□□□□ -1.33
GABRB3-218ENST00000635994 CAPN12Q6ZSI9 719 aa6.72□□□□□ -1.33
GABRB3-218ENST00000635994 EEPD1Q7L9B9 569 aa6.72□□□□□ -1.33
GABRB3-218ENST00000635994 SPATA2LQ8IUW3 424 aaPredicted RBP6.72□□□□□ -1.33
GABRB3-218ENST00000635994 TTC30BQ8N4P2 665 aa6.72□□□□□ -1.33
GABRB3-218ENST00000635994 SDR42E1Q8WUS8 393 aa6.72□□□□□ -1.33
GABRB3-218ENST00000635994 GPKOWQ92917 476 aaPredicted RBP eCLIP6.72□□□□□ -1.33
GABRB3-218ENST00000635994 RMDN3Q96TC7 470 aa6.72□□□□□ -1.33
GABRB3-218ENST00000635994 PSMB7Q99436 277 aa6.72□□□□□ -1.33
GABRB3-218ENST00000635994 FOXP3Q9BZS1 431 aa6.72□□□□□ -1.33
GABRB3-218ENST00000635994 CASS4Q9NQ75 786 aa6.72□□□□□ -1.33
GABRB3-218ENST00000635994 NRBP1Q9UHY1 535 aa6.72□□□□□ -1.33
GABRB3-218ENST00000635994 HERC5Q9UII4 1024 aaKnown RBP6.72□□□□□ -1.33
GABRB3-218ENST00000635994 SH3BP1Q9Y3L3 701 aa6.72□□□□□ -1.33
GABRB3-218ENST00000635994 IQSEC2Q5JU85 1478 aa6.72□□□□□ -1.33
GABRB3-218ENST00000635994 CDK12Q9NYV4 1490 aaPredicted RBP6.72□□□□□ -1.33
GABRB3-218ENST00000635994 C19orf81C9J6K1 198 aa6.72□□□□□ -1.33
GABRB3-218ENST00000635994 AP1B1Q10567 949 aa6.72□□□□□ -1.33
GABRB3-218ENST00000635994 SNAPC2Q13487 334 aa6.72□□□□□ -1.33
GABRB3-218ENST00000635994 TP53BP2Q13625 1128 aa6.72□□□□□ -1.33
GABRB3-218ENST00000635994 EZH2Q15910 746 aaKnown RBP6.72□□□□□ -1.33
GABRB3-218ENST00000635994 DCAF4L1Q3SXM0 396 aa6.72□□□□□ -1.33
GABRB3-218ENST00000635994 TCP11X2Q5H9J9 407 aa6.72□□□□□ -1.33
GABRB3-218ENST00000635994 RASIP1Q5U651 963 aa6.72□□□□□ -1.33
GABRB3-218ENST00000635994 PKN3Q6P5Z2 889 aa6.72□□□□□ -1.33
GABRB3-218ENST00000635994 TAGAPQ8N103 731 aa6.72□□□□□ -1.33
GABRB3-218ENST00000635994 TSPYL6Q8N831 410 aa6.72□□□□□ -1.33
GABRB3-218ENST00000635994 TSEN34Q9BSV6 310 aaKnown RBP6.72□□□□□ -1.33
GABRB3-218ENST00000635994 SPON2Q9BUD6 331 aa6.72□□□□□ -1.33
GABRB3-218ENST00000635994 NHEJ1Q9H9Q4 299 aaPredicted RBP6.72□□□□□ -1.33
GABRB3-218ENST00000635994 LGR6Q9HBX8 967 aa6.72□□□□□ -1.33
GABRB3-218ENST00000635994 UBE2TQ9NPD8 197 aaPredicted RBP6.72□□□□□ -1.33
GABRB3-218ENST00000635994 VWDEQ8N2E2 1590 aa6.72□□□□□ -1.33
GABRB3-218ENST00000635994 HGSO14964 777 aaPredicted RBP6.72□□□□□ -1.33
GABRB3-218ENST00000635994 ARHGEF9O43307 516 aa6.72□□□□□ -1.33
GABRB3-218ENST00000635994 RNASEH1O60930 286 aaKnown RBP6.72□□□□□ -1.33
GABRB3-218ENST00000635994 VCLP18206 1134 aa6.72□□□□□ -1.33
GABRB3-218ENST00000635994 HADHAP40939 763 aa6.72□□□□□ -1.33
GABRB3-218ENST00000635994 GUCY2FP51841 1108 aa6.72□□□□□ -1.33
GABRB3-218ENST00000635994 PRELPP51888 382 aa6.72□□□□□ -1.33
GABRB3-218ENST00000635994 HDAC4P56524 1084 aa6.72□□□□□ -1.33
GABRB3-218ENST00000635994 HPCAP84074 193 aa6.72□□□□□ -1.33
GABRB3-218ENST00000635994 ZNF544Q6NX49 715 aa6.72□□□□□ -1.33
GABRB3-218ENST00000635994 LRRC8BQ6P9F7 803 aa6.72□□□□□ -1.33
GABRB3-218ENST00000635994 FAF2Q96CS3 445 aa6.72□□□□□ -1.33
GABRB3-218ENST00000635994 NUP85Q9BW27 656 aa6.72□□□□□ -1.33
GABRB3-218ENST00000635994 YIPF2Q9BWQ6 316 aa6.72□□□□□ -1.33
GABRB3-218ENST00000635994 NDFIP2Q9NV92 336 aa6.72□□□□□ -1.33
GABRB3-218ENST00000635994 GCNT4Q9P109 453 aa6.72□□□□□ -1.33
GABRB3-218ENST00000635994 HACL1Q9UJ83 578 aa6.72□□□□□ -1.33
GABRB3-218ENST00000635994 EXOC1LA0A1B0GW35 172 aa6.72□□□□□ -1.33
GABRB3-218ENST00000635994 SNTNA6NMZ2 147 aa6.72□□□□□ -1.33
GABRB3-218ENST00000635994 CCDC188H7C350 402 aa6.72□□□□□ -1.33
GABRB3-218ENST00000635994 ATP1A1P05023 1023 aaKnown RBP6.72□□□□□ -1.33
GABRB3-218ENST00000635994 SERPING1P05155 500 aa6.72□□□□□ -1.33
GABRB3-218ENST00000635994 CD58P19256 250 aa6.72□□□□□ -1.33
GABRB3-218ENST00000635994 EPHB4P54760 987 aa6.72□□□□□ -1.33
GABRB3-218ENST00000635994 COPS2P61201 443 aa6.72□□□□□ -1.33
GABRB3-218ENST00000635994 MDM2Q00987 491 aaPredicted RBP6.72□□□□□ -1.33
GABRB3-218ENST00000635994 MKRN3Q13064 507 aaKnown RBP6.72□□□□□ -1.33
GABRB3-218ENST00000635994 RCN2Q14257 317 aa6.72□□□□□ -1.33
GABRB3-218ENST00000635994 ZBTB41Q5SVQ8 909 aa6.72□□□□□ -1.33
GABRB3-218ENST00000635994 ALS2CLQ60I27 953 aa6.72□□□□□ -1.33
GABRB3-218ENST00000635994 ANKS6Q68DC2 871 aa6.72□□□□□ -1.33
GABRB3-218ENST00000635994 SNRNP48Q6IEG0 339 aaKnown RBP6.72□□□□□ -1.33
GABRB3-218ENST00000635994 TRIM48Q8IWZ4 208 aa6.72□□□□□ -1.33
GABRB3-218ENST00000635994 THNSL1Q8IYQ7 743 aa6.72□□□□□ -1.33
GABRB3-218ENST00000635994 SCYL3Q8IZE3 742 aa6.72□□□□□ -1.33
GABRB3-218ENST00000635994 KRT78Q8N1N4 520 aa6.72□□□□□ -1.33
GABRB3-218ENST00000635994 SSH3Q8TE77 659 aa6.72□□□□□ -1.33
GABRB3-218ENST00000635994 TBCKQ8TEA7 893 aa6.72□□□□□ -1.33
GABRB3-218ENST00000635994 TSPAN17Q96FV3 270 aa6.72□□□□□ -1.33
GABRB3-218ENST00000635994 THAP9Q9H5L6 903 aa6.72□□□□□ -1.33
GABRB3-218ENST00000635994 EML4Q9HC35 981 aaKnown RBP6.72□□□□□ -1.33
GABRB3-218ENST00000635994 RNF146Q9NTX7 359 aa6.72□□□□□ -1.33
GABRB3-218ENST00000635994 GINM1Q9NU53 330 aa6.72□□□□□ -1.33
GABRB3-218ENST00000635994 KIF17Q9P2E2 1029 aa6.72□□□□□ -1.33
GABRB3-218ENST00000635994 SPDYE5A6NIY4 337 aa6.71□□□□□ -1.33
GABRB3-218ENST00000635994 PRPF3O43395 683 aaKnown RBP6.71□□□□□ -1.33
GABRB3-218ENST00000635994 LMNAP02545 664 aaKnown RBP6.71□□□□□ -1.33
GABRB3-218ENST00000635994 PLA2G4BP0C869 781 aa6.71□□□□□ -1.33
GABRB3-218ENST00000635994 JAK1P23458 1154 aa6.71□□□□□ -1.33
GABRB3-218ENST00000635994 RANBP1P43487 201 aa6.71□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms