RNA–Protein interactions for RNA: ENST00000635970.1

CLN8-209, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 5

Gene CLN8, Length 1,958 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-209ENST00000635970 TSGA10Q9BZW7 698 aa16.95■□□□□ 0.3
CLN8-209ENST00000635970 PCDH10Q9P2E7 1040 aa16.95■□□□□ 0.3
CLN8-209ENST00000635970 REXO2Q9Y3B8 237 aaKnown RBP16.95■□□□□ 0.3
CLN8-209ENST00000635970 TTC26A0AVF1 554 aa16.94■□□□□ 0.3
CLN8-209ENST00000635970 TRIM66O15016 1216 aa16.94■□□□□ 0.3
CLN8-209ENST00000635970 CASP1P29466 404 aa16.94■□□□□ 0.3
CLN8-209ENST00000635970 EFCAB13Q8IY85 973 aa16.94■□□□□ 0.3
CLN8-209ENST00000635970 ADSSL1Q8N142 457 aa16.94■□□□□ 0.3
CLN8-209ENST00000635970 ZNF507Q8TCN5 953 aa16.94■□□□□ 0.3
CLN8-209ENST00000635970 PCYT2Q99447 389 aa16.94■□□□□ 0.3
CLN8-209ENST00000635970 RIT2Q99578 217 aa16.94■□□□□ 0.3
CLN8-209ENST00000635970 CHP1Q99653 195 aa16.94■□□□□ 0.3
CLN8-209ENST00000635970 MAGEC2Q9UBF1 373 aaPredicted RBP16.94■□□□□ 0.3
CLN8-209ENST00000635970 VAV3Q9UKW4 847 aa16.94■□□□□ 0.3
CLN8-209ENST00000635970 EIF3CLB5ME19 914 aaKnown RBP16.93■□□□□ 0.3
CLN8-209ENST00000635970 RNF225M0QZC1 329 aaPredicted RBP16.93■□□□□ 0.3
CLN8-209ENST00000635970 CABYRO75952 493 aa16.93■□□□□ 0.3
CLN8-209ENST00000635970 ABL1P00519 1130 aa16.93■□□□□ 0.3
CLN8-209ENST00000635970 ITGA7Q13683 1181 aa16.93■□□□□ 0.3
CLN8-209ENST00000635970 TRIM60Q495X7 471 aa16.93■□□□□ 0.3
CLN8-209ENST00000635970 DNAJC21Q5F1R6 531 aaKnown RBP16.93■□□□□ 0.3
CLN8-209ENST00000635970 EIF3CQ99613 913 aaKnown RBP16.93■□□□□ 0.3
CLN8-209ENST00000635970 CRACR2AQ9BSW2 395 aa16.93■□□□□ 0.3
CLN8-209ENST00000635970 SAMM50Q9Y512 469 aa16.93■□□□□ 0.3
CLN8-209ENST00000635970 TRIP12Q14669 1992 aaPredicted RBP16.93■□□□□ 0.3
CLN8-209ENST00000635970 TBX3O15119 743 aa16.93■□□□□ 0.3
CLN8-209ENST00000635970 MARCH6O60337 910 aa16.93■□□□□ 0.3
CLN8-209ENST00000635970 KPNA6O60684 536 aa16.93■□□□□ 0.3
CLN8-209ENST00000635970 SHOX2O60902 331 aaPredicted RBP16.93■□□□□ 0.3
CLN8-209ENST00000635970 MARK3P27448 753 aa16.93■□□□□ 0.3
CLN8-209ENST00000635970 NOP2P46087 812 aaKnown RBP16.93■□□□□ 0.3
CLN8-209ENST00000635970 KRT76Q01546 638 aa16.93■□□□□ 0.3
CLN8-209ENST00000635970 MFSD10Q14728 455 aa16.93■□□□□ 0.3
CLN8-209ENST00000635970 SNX17Q15036 470 aa16.93■□□□□ 0.3
CLN8-209ENST00000635970 KIAA0753Q2KHM9 967 aa16.93■□□□□ 0.3
CLN8-209ENST00000635970 NBPF20Q3BBV1 942 aa16.93■□□□□ 0.3
CLN8-209ENST00000635970 ZNF746Q6NUN9 644 aaPredicted RBP16.93■□□□□ 0.3
CLN8-209ENST00000635970 B3GNT9Q6UX72 402 aa16.93■□□□□ 0.3
CLN8-209ENST00000635970 ABHD15Q6UXT9 468 aa16.93■□□□□ 0.3
CLN8-209ENST00000635970 CCDC60Q8IWA6 550 aaPredicted RBP16.93■□□□□ 0.3
CLN8-209ENST00000635970 FAM20AQ96MK3 541 aa16.93■□□□□ 0.3
CLN8-209ENST00000635970 MTMR9Q96QG7 549 aa16.93■□□□□ 0.3
CLN8-209ENST00000635970 MAGEF1Q9HAY2 307 aa16.93■□□□□ 0.3
CLN8-209ENST00000635970 ATP11BQ9Y2G3 1177 aa16.93■□□□□ 0.3
CLN8-209ENST00000635970 H3BRB1 525 aa16.92■□□□□ 0.3
CLN8-209ENST00000635970 ATG7O95352 703 aa16.92■□□□□ 0.3
CLN8-209ENST00000635970 SUPT20HL2P0C7V6 817 aa16.92■□□□□ 0.3
CLN8-209ENST00000635970 PRLRP16471 622 aa16.92■□□□□ 0.3
CLN8-209ENST00000635970 PRCPP42785 496 aa16.92■□□□□ 0.3
CLN8-209ENST00000635970 PSEN2P49810 448 aa16.92■□□□□ 0.3
CLN8-209ENST00000635970 RTP1P59025 263 aa16.92■□□□□ 0.3
CLN8-209ENST00000635970 FIGNQ5HY92 759 aa16.92■□□□□ 0.3
CLN8-209ENST00000635970 GBP6Q6ZN66 633 aa16.92■□□□□ 0.3
CLN8-209ENST00000635970 KIAA1328Q86T90 577 aa16.92■□□□□ 0.3
CLN8-209ENST00000635970 BLZF1Q9H2G9 400 aa16.92■□□□□ 0.3
CLN8-209ENST00000635970 TUT1Q9H6E5 874 aaKnown RBP16.92■□□□□ 0.3
CLN8-209ENST00000635970 TCEAL9Q9UHQ7 104 aa16.92■□□□□ 0.3
CLN8-209ENST00000635970 EMSYQ7Z589 1322 aa16.92■□□□□ 0.3
CLN8-209ENST00000635970 VGLL3A8MV65 326 aa16.91■□□□□ 0.3
CLN8-209ENST00000635970 HAS3O00219 553 aa16.91■□□□□ 0.3
CLN8-209ENST00000635970 EML1O00423 815 aa16.91■□□□□ 0.3
CLN8-209ENST00000635970 PSMA7O14818 248 aa16.91■□□□□ 0.3
CLN8-209ENST00000635970 PQBP1O60828 265 aaKnown RBP16.91■□□□□ 0.3
CLN8-209ENST00000635970 CPP00450 1065 aa16.91■□□□□ 0.3
CLN8-209ENST00000635970 CDC25AP30304 524 aa16.91■□□□□ 0.3
CLN8-209ENST00000635970 TXKP42681 527 aa16.91■□□□□ 0.3
CLN8-209ENST00000635970 SPIRE1Q08AE8 756 aa16.91■□□□□ 0.3
CLN8-209ENST00000635970 TTC31Q49AM3 519 aaPredicted RBP16.91■□□□□ 0.3
CLN8-209ENST00000635970 CCNI2Q6ZMN8 369 aaPredicted RBP16.91■□□□□ 0.3
CLN8-209ENST00000635970 ZNF572Q7Z3I7 529 aaPredicted RBP16.91■□□□□ 0.3
CLN8-209ENST00000635970 IRF2BP1Q8IU81 584 aa16.91■□□□□ 0.3
CLN8-209ENST00000635970 FAM114A1Q8IWE2 563 aa16.91■□□□□ 0.3
CLN8-209ENST00000635970 SLFN12Q8IYM2 578 aa16.91■□□□□ 0.3
CLN8-209ENST00000635970 C4orf32Q8N8J7 132 aa16.91■□□□□ 0.3
CLN8-209ENST00000635970 GLG1Q92896 1179 aa16.91■□□□□ 0.3
CLN8-209ENST00000635970 JAKMIP2Q96AA8 810 aa16.91■□□□□ 0.3
CLN8-209ENST00000635970 DHTKD1Q96HY7 919 aaPredicted RBP16.91■□□□□ 0.3
CLN8-209ENST00000635970 MTRQ99707 1265 aa16.91■□□□□ 0.3
CLN8-209ENST00000635970 CUEDC2Q9H467 287 aa16.91■□□□□ 0.3
CLN8-209ENST00000635970 KAT6AQ92794 2004 aa16.91■□□□□ 0.3
CLN8-209ENST00000635970 A0A1W2PQJ5 194 aa16.91■□□□□ 0.3
CLN8-209ENST00000635970 WDR64B1ANS9 1081 aa16.91■□□□□ 0.3
CLN8-209ENST00000635970 ARVCFO00192 962 aa16.91■□□□□ 0.3
CLN8-209ENST00000635970 BACH1O14867 736 aa16.91■□□□□ 0.3
CLN8-209ENST00000635970 LGR5O75473 907 aa16.91■□□□□ 0.3
CLN8-209ENST00000635970 OR52Z1P0C646 297 aa16.91■□□□□ 0.3
CLN8-209ENST00000635970 STAT6P42226 847 aa16.91■□□□□ 0.3
CLN8-209ENST00000635970 FAM47CQ5HY64 1035 aa16.91■□□□□ 0.3
CLN8-209ENST00000635970 SWSAP1Q6NVH7 229 aa16.91■□□□□ 0.3
CLN8-209ENST00000635970 SLC43A3Q8NBI5 491 aa16.91■□□□□ 0.3
CLN8-209ENST00000635970 MMS19Q96T76 1030 aa16.91■□□□□ 0.3
CLN8-209ENST00000635970 HTATIP2Q9BUP3 242 aa16.91■□□□□ 0.3
CLN8-209ENST00000635970 KATNAL1Q9BW62 490 aa16.91■□□□□ 0.3
CLN8-209ENST00000635970 DISC1Q9NRI5 854 aa16.91■□□□□ 0.3
CLN8-209ENST00000635970 PCDHA10Q9Y5I2 948 aa16.91■□□□□ 0.3
CLN8-209ENST00000635970 IGKV6D-21A0A0A0MT36 114 aa16.9■□□□□ 0.3
CLN8-209ENST00000635970 PHACTR2O75167 634 aa16.9■□□□□ 0.3
CLN8-209ENST00000635970 RHOBTB3O94955 611 aa16.9■□□□□ 0.3
CLN8-209ENST00000635970 ATP1A1P05023 1023 aaKnown RBP16.9■□□□□ 0.3
CLN8-209ENST00000635970 CDK7P50613 346 aa16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms