RNA–Protein interactions for RNA: ENST00000635675.2

LINC00339-210, long intergenic non-protein coding RNA 339, humanhuman

TSL 5 BASIC

Gene LINC00339, Length 1,404 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-210ENST00000635675 LARP4BQ92615 738 aaKnown RBP10.77□□□□□ -0.68
LINC00339-210ENST00000635675 TIFAQ96CG3 184 aa10.77□□□□□ -0.68
LINC00339-210ENST00000635675 ZBED2Q9BTP6 218 aa10.77□□□□□ -0.68
LINC00339-210ENST00000635675 TRAIPQ9BWF2 469 aa10.77□□□□□ -0.68
LINC00339-210ENST00000635675 PANK2Q9BZ23 570 aa10.77□□□□□ -0.68
LINC00339-210ENST00000635675 NKX2-4Q9H2Z4 354 aa10.77□□□□□ -0.68
LINC00339-210ENST00000635675 TTYH1Q9H313 450 aaPredicted RBP10.77□□□□□ -0.68
LINC00339-210ENST00000635675 AGPAT5Q9NUQ2 364 aa10.77□□□□□ -0.68
LINC00339-210ENST00000635675 STK17AQ9UEE5 414 aa10.77□□□□□ -0.68
LINC00339-210ENST00000635675 INSL6Q9Y581 213 aa10.77□□□□□ -0.68
LINC00339-210ENST00000635675 TMEM265A0A087WTH1 108 aa10.76□□□□□ -0.69
LINC00339-210ENST00000635675 NPHP3-ACAD11A0A0J9YXS1 232 aa10.76□□□□□ -0.69
LINC00339-210ENST00000635675 LCHNA4D1U4 455 aa10.76□□□□□ -0.69
LINC00339-210ENST00000635675 LRRIQ4A6NIV6 560 aa10.76□□□□□ -0.69
LINC00339-210ENST00000635675 SFI1A8K8P3 1242 aa10.76□□□□□ -0.69
LINC00339-210ENST00000635675 INO80B-WBP1J3KQ70 363 aa10.76□□□□□ -0.69
LINC00339-210ENST00000635675 DGKIO75912 1065 aa10.76□□□□□ -0.69
LINC00339-210ENST00000635675 CA3P07451 260 aa10.76□□□□□ -0.69
LINC00339-210ENST00000635675 NCLP19338 710 aaKnown RBP10.76□□□□□ -0.69
LINC00339-210ENST00000635675 RAD51AP2Q09MP3 1159 aa10.76□□□□□ -0.69
LINC00339-210ENST00000635675 PPP2R5AQ15172 486 aa10.76□□□□□ -0.69
LINC00339-210ENST00000635675 AMHR2Q16671 573 aa10.76□□□□□ -0.69
LINC00339-210ENST00000635675 CCDC73Q6ZRK6 1079 aa10.76□□□□□ -0.69
LINC00339-210ENST00000635675 GPBP1Q86WP2 473 aa10.76□□□□□ -0.69
LINC00339-210ENST00000635675 NPAS4Q8IUM7 802 aa10.76□□□□□ -0.69
LINC00339-210ENST00000635675 SP7Q8TDD2 431 aaPredicted RBP10.76□□□□□ -0.69
LINC00339-210ENST00000635675 IFT74Q96LB3 600 aa10.76□□□□□ -0.69
LINC00339-210ENST00000635675 SPATA32Q96LK8 384 aa10.76□□□□□ -0.69
LINC00339-210ENST00000635675 DRC1Q96MC2 740 aa10.76□□□□□ -0.69
LINC00339-210ENST00000635675 NTPCRQ9BSD7 190 aaKnown RBP10.76□□□□□ -0.69
LINC00339-210ENST00000635675 SCAND2PQ9GZW5 306 aaPredicted RBP10.76□□□□□ -0.69
LINC00339-210ENST00000635675 SEMA6BQ9H3T3 888 aa10.76□□□□□ -0.69
LINC00339-210ENST00000635675 FZD8Q9H461 694 aa10.76□□□□□ -0.69
LINC00339-210ENST00000635675 C17orf75Q9HAS0 396 aa10.76□□□□□ -0.69
LINC00339-210ENST00000635675 DACT1Q9NYF0 836 aa10.76□□□□□ -0.69
LINC00339-210ENST00000635675 CIZ1Q9ULV3 898 aaPredicted RBP10.76□□□□□ -0.69
LINC00339-210ENST00000635675 A0A0U1RQF3 1178 aa10.75□□□□□ -0.69
LINC00339-210ENST00000635675 TSPAN1O60635 241 aa10.75□□□□□ -0.69
LINC00339-210ENST00000635675 ARHGEF15O94989 841 aa10.75□□□□□ -0.69
LINC00339-210ENST00000635675 STAG3L1P0CL83 205 aa10.75□□□□□ -0.69
LINC00339-210ENST00000635675 STAT6P42226 847 aa10.75□□□□□ -0.69
LINC00339-210ENST00000635675 NPTX2P47972 431 aa10.75□□□□□ -0.69
LINC00339-210ENST00000635675 GIT2Q14161 759 aa10.75□□□□□ -0.69
LINC00339-210ENST00000635675 DHX8Q14562 1220 aaKnown RBP10.75□□□□□ -0.69
LINC00339-210ENST00000635675 E2F4Q16254 413 aa10.75□□□□□ -0.69
LINC00339-210ENST00000635675 FAM187BQ17R55 369 aa10.75□□□□□ -0.69
LINC00339-210ENST00000635675 RESP18Q5W5W9 173 aa10.75□□□□□ -0.69
LINC00339-210ENST00000635675 ADALQ6DHV7 355 aa10.75□□□□□ -0.69
LINC00339-210ENST00000635675 Q7L0L9 218 aa10.75□□□□□ -0.69
LINC00339-210ENST00000635675 ECHDC2Q86YB7 292 aa10.75□□□□□ -0.69
LINC00339-210ENST00000635675 ZBTB8OSQ8IWT0 167 aa10.75□□□□□ -0.69
LINC00339-210ENST00000635675 DEFB123Q8N688 67 aa10.75□□□□□ -0.69
LINC00339-210ENST00000635675 PDILTQ8N807 584 aa10.75□□□□□ -0.69
LINC00339-210ENST00000635675 DEPTORQ8TB45 409 aa10.75□□□□□ -0.69
LINC00339-210ENST00000635675 ZNF689Q96CS4 500 aaPredicted RBP10.75□□□□□ -0.69
LINC00339-210ENST00000635675 YME1L1Q96TA2 773 aa10.75□□□□□ -0.69
LINC00339-210ENST00000635675 REEP2Q9BRK0 252 aa10.75□□□□□ -0.69
LINC00339-210ENST00000635675 CCDC113Q9H0I3 377 aa10.75□□□□□ -0.69
LINC00339-210ENST00000635675 C2orf40Q9H1Z8 148 aa10.75□□□□□ -0.69
LINC00339-210ENST00000635675 ZNF576Q9H609 170 aa10.75□□□□□ -0.69
LINC00339-210ENST00000635675 ELAC1Q9H777 363 aaKnown RBP10.75□□□□□ -0.69
LINC00339-210ENST00000635675 SLC28A3Q9HAS3 691 aa10.75□□□□□ -0.69
LINC00339-210ENST00000635675 RC3H2Q9HBD1 1191 aaKnown RBP10.75□□□□□ -0.69
LINC00339-210ENST00000635675 TMEM161AQ9NX61 479 aa10.75□□□□□ -0.69
LINC00339-210ENST00000635675 ODF2LQ9ULJ1 636 aa10.75□□□□□ -0.69
LINC00339-210ENST00000635675 PIN4Q9Y237 131 aaKnown RBP10.75□□□□□ -0.69
LINC00339-210ENST00000635675 PCDHB7Q9Y5E2 793 aa10.75□□□□□ -0.69
LINC00339-210ENST00000635675 ADGRA3Q8IWK6 1321 aa10.75□□□□□ -0.69
LINC00339-210ENST00000635675 CHD9Q3L8U1 2897 aa10.75□□□□□ -0.69
LINC00339-210ENST00000635675 COL4A6Q14031 1691 aa10.75□□□□□ -0.69
LINC00339-210ENST00000635675 LINC01553A4QN01 128 aa10.75□□□□□ -0.69
LINC00339-210ENST00000635675 ZNF623O75123 536 aa10.75□□□□□ -0.69
LINC00339-210ENST00000635675 ERLIN2O94905 339 aa10.75□□□□□ -0.69
LINC00339-210ENST00000635675 EOMESO95936 686 aa10.75□□□□□ -0.69
LINC00339-210ENST00000635675 PLS3P13797 630 aa10.75□□□□□ -0.69
LINC00339-210ENST00000635675 ARF4P18085 180 aaPredicted RBP10.75□□□□□ -0.69
LINC00339-210ENST00000635675 AXLP30530 894 aa10.75□□□□□ -0.69
LINC00339-210ENST00000635675 EFNA5P52803 228 aa10.75□□□□□ -0.69
LINC00339-210ENST00000635675 PEX3P56589 373 aa10.75□□□□□ -0.69
LINC00339-210ENST00000635675 TAP1Q03518 808 aa10.75□□□□□ -0.69
LINC00339-210ENST00000635675 DMP1Q13316 513 aaPredicted RBP10.75□□□□□ -0.69
LINC00339-210ENST00000635675 UBXN11Q5T124 520 aa10.75□□□□□ -0.69
LINC00339-210ENST00000635675 ZNF697Q5TEC3 545 aa10.75□□□□□ -0.69
LINC00339-210ENST00000635675 PPP2R2DQ66LE6 453 aa10.75□□□□□ -0.69
LINC00339-210ENST00000635675 TWF2Q6IBS0 349 aaKnown RBP10.75□□□□□ -0.69
LINC00339-210ENST00000635675 SV2BQ7L1I2 683 aa10.75□□□□□ -0.69
LINC00339-210ENST00000635675 ZNF598Q86UK7 904 aaKnown RBP10.75□□□□□ -0.69
LINC00339-210ENST00000635675 SPIRE2Q8WWL2 714 aa10.75□□□□□ -0.69
LINC00339-210ENST00000635675 PRIMPOLQ96LW4 560 aa10.75□□□□□ -0.69
LINC00339-210ENST00000635675 KIFC3Q9BVG8 833 aa10.75□□□□□ -0.69
LINC00339-210ENST00000635675 PRMT7Q9NVM4 692 aaPredicted RBP10.75□□□□□ -0.69
LINC00339-210ENST00000635675 ARHGAP28Q9P2N2 729 aa10.75□□□□□ -0.69
LINC00339-210ENST00000635675 KCNG1Q9UIX4 513 aa10.75□□□□□ -0.69
LINC00339-210ENST00000635675 LRFN2Q9ULH4 789 aa10.75□□□□□ -0.69
LINC00339-210ENST00000635675 SZT2Q5T011 3432 aa10.75□□□□□ -0.69
LINC00339-210ENST00000635675 MYH11P35749 1972 aa10.74□□□□□ -0.69
LINC00339-210ENST00000635675 A0A1B0GUA9 196 aa10.74□□□□□ -0.69
LINC00339-210ENST00000635675 MYMKA6NI61 221 aa10.74□□□□□ -0.69
LINC00339-210ENST00000635675 TTLL13PA6NNM8 815 aa10.74□□□□□ -0.69
LINC00339-210ENST00000635675 CCDC169A6NNP5 214 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms