RNA–Protein interactions for RNA: ENST00000628516.1

LINC00628-201, long intergenic non-protein coding RNA 628, humanhuman

BASIC

Gene LINC00628, Length 1,289 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00628-201ENST00000628516 BARX2Q9UMQ3 279 aaPredicted RBP18.35■□□□□ 0.53
LINC00628-201ENST00000628516 FAM86C2PA6NEL3 165 aa18.34■□□□□ 0.53
LINC00628-201ENST00000628516 FSCN2O14926 492 aa18.34■□□□□ 0.53
LINC00628-201ENST00000628516 NEMFO60524 1076 aa18.34■□□□□ 0.53
LINC00628-201ENST00000628516 SLITRK3O94933 977 aa18.34■□□□□ 0.53
LINC00628-201ENST00000628516 SKIP12755 728 aa18.34■□□□□ 0.53
LINC00628-201ENST00000628516 EMC2Q15006 297 aa18.34■□□□□ 0.53
LINC00628-201ENST00000628516 LONRF3Q496Y0 759 aa18.34■□□□□ 0.53
LINC00628-201ENST00000628516 TCP11Q8WWU5 503 aa18.34■□□□□ 0.53
LINC00628-201ENST00000628516 LPPQ93052 612 aa18.34■□□□□ 0.53
LINC00628-201ENST00000628516 TCF25Q9BQ70 676 aa18.34■□□□□ 0.53
LINC00628-201ENST00000628516 EIF2AK1Q9BQI3 630 aaKnown RBP18.34■□□□□ 0.53
LINC00628-201ENST00000628516 TRAIPQ9BWF2 469 aa18.34■□□□□ 0.53
LINC00628-201ENST00000628516 TTC12Q9H892 705 aaPredicted RBP18.34■□□□□ 0.53
LINC00628-201ENST00000628516 FAM105AQ9NUU6 356 aa18.34■□□□□ 0.53
LINC00628-201ENST00000628516 SPG21Q9NZD8 308 aa18.34■□□□□ 0.53
LINC00628-201ENST00000628516 C19orf67A6NJJ6 358 aa18.33■□□□□ 0.52
LINC00628-201ENST00000628516 WNT7AO00755 349 aa18.33■□□□□ 0.52
LINC00628-201ENST00000628516 GAS2O43903 313 aaKnown RBP18.33■□□□□ 0.52
LINC00628-201ENST00000628516 GPR37L1O60883 481 aa18.33■□□□□ 0.52
LINC00628-201ENST00000628516 CD2BP2O95400 341 aaKnown RBP18.33■□□□□ 0.52
LINC00628-201ENST00000628516 EYA4O95677 639 aa18.33■□□□□ 0.52
LINC00628-201ENST00000628516 GLP2RO95838 553 aa18.33■□□□□ 0.52
LINC00628-201ENST00000628516 ALADP13716 330 aa18.33■□□□□ 0.52
LINC00628-201ENST00000628516 TXKP42681 527 aa18.33■□□□□ 0.52
LINC00628-201ENST00000628516 RAB27AP51159 221 aa18.33■□□□□ 0.52
LINC00628-201ENST00000628516 GUCY1B3Q02153 619 aa18.33■□□□□ 0.52
LINC00628-201ENST00000628516 LAMTOR4Q0VGL1 99 aa18.33■□□□□ 0.52
LINC00628-201ENST00000628516 COASYQ13057 564 aa18.33■□□□□ 0.52
LINC00628-201ENST00000628516 SAFBQ15424 915 aaKnown RBP eCLIP18.33■□□□□ 0.52
LINC00628-201ENST00000628516 DUSP6Q16828 381 aa18.33■□□□□ 0.52
LINC00628-201ENST00000628516 SRGAP1Q7Z6B7 1085 aa18.33■□□□□ 0.52
LINC00628-201ENST00000628516 CCDC83Q8IWF9 413 aa18.33■□□□□ 0.52
LINC00628-201ENST00000628516 ZSCAN31Q96LW9 406 aaPredicted RBP18.33■□□□□ 0.52
LINC00628-201ENST00000628516 POP1Q99575 1024 aaKnown RBP18.33■□□□□ 0.52
LINC00628-201ENST00000628516 CDCA3Q99618 268 aaPredicted RBP18.33■□□□□ 0.52
LINC00628-201ENST00000628516 MTRQ99707 1265 aa18.33■□□□□ 0.52
LINC00628-201ENST00000628516 NGRNQ9NPE2 291 aaKnown RBP18.33■□□□□ 0.52
LINC00628-201ENST00000628516 C11orf16Q9NQ32 467 aa18.33■□□□□ 0.52
LINC00628-201ENST00000628516 FSD2A1L4K1 749 aa18.32■□□□□ 0.52
LINC00628-201ENST00000628516 NT5C1B-RDH14C9J2C7 533 aa18.32■□□□□ 0.52
LINC00628-201ENST00000628516 ASAP2O43150 1006 aa18.32■□□□□ 0.52
LINC00628-201ENST00000628516 ATP2B1P20020 1258 aa18.32■□□□□ 0.52
LINC00628-201ENST00000628516 ALDH7A1P49419 539 aaKnown RBP18.32■□□□□ 0.52
LINC00628-201ENST00000628516 RBM10P98175 930 aaKnown RBP18.32■□□□□ 0.52
LINC00628-201ENST00000628516 TMC7Q7Z402 723 aa18.32■□□□□ 0.52
LINC00628-201ENST00000628516 FERMT3Q86UX7 667 aa18.32■□□□□ 0.52
LINC00628-201ENST00000628516 SLC39A11Q8N1S5 342 aa18.32■□□□□ 0.52
LINC00628-201ENST00000628516 RNF149Q8NC42 400 aa18.32■□□□□ 0.52
LINC00628-201ENST00000628516 SMRP1Q8NCR6 262 aa18.32■□□□□ 0.52
LINC00628-201ENST00000628516 HSD17B14Q9BPX1 270 aa18.32■□□□□ 0.52
LINC00628-201ENST00000628516 MINDY3Q9H8M7 445 aa18.32■□□□□ 0.52
LINC00628-201ENST00000628516 AGPAT5Q9NUQ2 364 aa18.32■□□□□ 0.52
LINC00628-201ENST00000628516 INPP5FQ9Y2H2 1132 aa18.32■□□□□ 0.52
LINC00628-201ENST00000628516 MEIS3P2A8K0S8 358 aa18.31■□□□□ 0.52
LINC00628-201ENST00000628516 HIDE1A8MVS5 230 aa18.31■□□□□ 0.52
LINC00628-201ENST00000628516 DCXO43602 365 aa18.31■□□□□ 0.52
LINC00628-201ENST00000628516 ZNF623O75123 536 aa18.31■□□□□ 0.52
LINC00628-201ENST00000628516 ZC3H11AO75152 810 aaKnown RBP eCLIP18.31■□□□□ 0.52
LINC00628-201ENST00000628516 BCAR1P56945 870 aa18.31■□□□□ 0.52
LINC00628-201ENST00000628516 GLB1LQ6UWU2 654 aa18.31■□□□□ 0.52
LINC00628-201ENST00000628516 VN1R2Q8NFZ6 395 aa18.31■□□□□ 0.52
LINC00628-201ENST00000628516 RSPH1Q8WYR4 309 aa18.31■□□□□ 0.52
LINC00628-201ENST00000628516 PGBD4Q96DM1 585 aa18.31■□□□□ 0.52
LINC00628-201ENST00000628516 CCDC43Q96MW1 224 aaKnown RBP18.31■□□□□ 0.52
LINC00628-201ENST00000628516 MTMR9Q96QG7 549 aa18.31■□□□□ 0.52
LINC00628-201ENST00000628516 SH2B1Q9NRF2 756 aaPredicted RBP18.31■□□□□ 0.52
LINC00628-201ENST00000628516 PCDHB2Q9Y5E7 798 aa18.31■□□□□ 0.52
LINC00628-201ENST00000628516 LYPLA2O95372 231 aa18.3■□□□□ 0.52
LINC00628-201ENST00000628516 SRGAP2BP0DMP2 458 aa18.3■□□□□ 0.52
LINC00628-201ENST00000628516 MCM7P33993 719 aa18.3■□□□□ 0.52
LINC00628-201ENST00000628516 NOMO2Q5JPE7 1267 aa18.3■□□□□ 0.52
LINC00628-201ENST00000628516 TMEM169Q96HH4 297 aa18.3■□□□□ 0.52
LINC00628-201ENST00000628516 C8orf76Q96K31 380 aa18.3■□□□□ 0.52
LINC00628-201ENST00000628516 TMEM60Q9H2L4 133 aa18.3■□□□□ 0.52
LINC00628-201ENST00000628516 XPNPEP1Q9NQW7 623 aa18.3■□□□□ 0.52
LINC00628-201ENST00000628516 ANKEF1Q9NU02 776 aa18.3■□□□□ 0.52
LINC00628-201ENST00000628516 TBC1D13Q9NVG8 400 aa18.3■□□□□ 0.52
LINC00628-201ENST00000628516 USP15Q9Y4E8 981 aaPredicted RBP18.3■□□□□ 0.52
LINC00628-201ENST00000628516 POTEMA6NI47 508 aa18.29■□□□□ 0.52
LINC00628-201ENST00000628516 OFD1O75665 1012 aa18.29■□□□□ 0.52
LINC00628-201ENST00000628516 DGAT1O75907 488 aa18.29■□□□□ 0.52
LINC00628-201ENST00000628516 HOXA11P31270 313 aaPredicted RBP18.29■□□□□ 0.52
LINC00628-201ENST00000628516 CA8P35219 290 aa18.29■□□□□ 0.52
LINC00628-201ENST00000628516 MCM2P49736 904 aa18.29■□□□□ 0.52
LINC00628-201ENST00000628516 RNASELQ05823 741 aaKnown RBP18.29■□□□□ 0.52
LINC00628-201ENST00000628516 MXD4Q14582 209 aaPredicted RBP18.29■□□□□ 0.52
LINC00628-201ENST00000628516 SMC1AQ14683 1233 aaKnown RBP18.29■□□□□ 0.52
LINC00628-201ENST00000628516 LLGL2Q6P1M3 1020 aa18.29■□□□□ 0.52
LINC00628-201ENST00000628516 LLPHQ9BRT6 129 aaKnown RBP18.29■□□□□ 0.52
LINC00628-201ENST00000628516 NRDE2Q9H7Z3 1164 aa18.29■□□□□ 0.52
LINC00628-201ENST00000628516 A0A087WWV3 80 aa18.28■□□□□ 0.52
LINC00628-201ENST00000628516 ERLIN2O94905 339 aa18.28■□□□□ 0.52
LINC00628-201ENST00000628516 PLA2G5P39877 138 aa18.28■□□□□ 0.52
LINC00628-201ENST00000628516 TECP42680 631 aa18.28■□□□□ 0.52
LINC00628-201ENST00000628516 PTENP60484 403 aa18.28■□□□□ 0.52
LINC00628-201ENST00000628516 TFDP1Q14186 410 aa18.28■□□□□ 0.52
LINC00628-201ENST00000628516 BMS1Q14692 1282 aaKnown RBP18.28■□□□□ 0.52
LINC00628-201ENST00000628516 AGMOQ6ZNB7 445 aa18.28■□□□□ 0.52
LINC00628-201ENST00000628516 URGCPQ8TCY9 931 aa18.28■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms