RNA–Protein interactions for RNA: ENST00000627864.1

MECP2-216, Transcript of methyl-CpG binding protein 2, humanhuman

TSL 3

Gene MECP2, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MECP2-216ENST00000627864 CD52P31358 61 aa20.78■□□□□ 0.92
MECP2-216ENST00000627864 NFX1Q12986 1120 aaKnown RBP20.78■□□□□ 0.92
MECP2-216ENST00000627864 PNOCQ13519 176 aa20.78■□□□□ 0.92
MECP2-216ENST00000627864 UNC13DQ70J99 1090 aa20.78■□□□□ 0.92
MECP2-216ENST00000627864 IFNLR1Q8IU57 520 aaPredicted RBP20.78■□□□□ 0.92
MECP2-216ENST00000627864 SPIRE2Q8WWL2 714 aa20.78■□□□□ 0.92
MECP2-216ENST00000627864 C2orf40Q9H1Z8 148 aa20.78■□□□□ 0.92
MECP2-216ENST00000627864 IL23AQ9NPF7 189 aa20.78■□□□□ 0.92
MECP2-216ENST00000627864 TBC1D7Q9P0N9 293 aa20.78■□□□□ 0.92
MECP2-216ENST00000627864 HOOK1Q9UJC3 728 aaKnown RBP20.78■□□□□ 0.92
MECP2-216ENST00000627864 ADGRA3Q8IWK6 1321 aa20.78■□□□□ 0.92
MECP2-216ENST00000627864 MKI67P46013 3256 aaKnown RBP20.77■□□□□ 0.92
MECP2-216ENST00000627864 PVALEFA0A1B0GWK0 134 aa20.77■□□□□ 0.92
MECP2-216ENST00000627864 FRMD3A2A2Y4 597 aa20.77■□□□□ 0.92
MECP2-216ENST00000627864 CXCL10P02778 98 aa20.77■□□□□ 0.92
MECP2-216ENST00000627864 DPYDQ12882 1025 aa20.77■□□□□ 0.92
MECP2-216ENST00000627864 COASYQ13057 564 aa20.77■□□□□ 0.92
MECP2-216ENST00000627864 PAK2Q13177 524 aa20.77■□□□□ 0.92
MECP2-216ENST00000627864 CDCA2Q69YH5 1023 aaPredicted RBP20.77■□□□□ 0.92
MECP2-216ENST00000627864 CATSPER4Q7RTX7 472 aa20.77■□□□□ 0.92
MECP2-216ENST00000627864 FAM228AQ86W67 206 aa20.77■□□□□ 0.92
MECP2-216ENST00000627864 FAM178BQ8IXR5 827 aa20.77■□□□□ 0.92
MECP2-216ENST00000627864 DBF4BQ8NFT6 615 aa20.77■□□□□ 0.92
MECP2-216ENST00000627864 GPT2Q8TD30 523 aa20.77■□□□□ 0.92
MECP2-216ENST00000627864 SEPT8Q92599 483 aa20.77■□□□□ 0.92
MECP2-216ENST00000627864 NTPCRQ9BSD7 190 aaKnown RBP20.77■□□□□ 0.92
MECP2-216ENST00000627864 NFKBIZQ9BYH8 718 aa20.77■□□□□ 0.92
MECP2-216ENST00000627864 IFIH1Q9BYX4 1025 aaKnown RBP20.77■□□□□ 0.92
MECP2-216ENST00000627864 SEL1LQ9UBV2 794 aa20.77■□□□□ 0.92
MECP2-216ENST00000627864 PADI3Q9ULW8 664 aa20.77■□□□□ 0.92
MECP2-216ENST00000627864 ST3GAL5Q9UNP4 418 aa20.77■□□□□ 0.92
MECP2-216ENST00000627864 GPR182O15218 404 aa20.76■□□□□ 0.91
MECP2-216ENST00000627864 KLRC4O43908 158 aa20.76■□□□□ 0.91
MECP2-216ENST00000627864 RPN1P04843 607 aaKnown RBP20.76■□□□□ 0.91
MECP2-216ENST00000627864 SFPQP23246 707 aaKnown RBP eCLIP20.76■□□□□ 0.91
MECP2-216ENST00000627864 NMT1P30419 496 aaKnown RBP20.76■□□□□ 0.91
MECP2-216ENST00000627864 MAGEA10P43363 369 aaPredicted RBP20.76■□□□□ 0.91
MECP2-216ENST00000627864 EFNA5P52803 228 aa20.76■□□□□ 0.91
MECP2-216ENST00000627864 NCKAP1LP55160 1127 aa20.76■□□□□ 0.91
MECP2-216ENST00000627864 MBTD1Q05BQ5 628 aa20.76■□□□□ 0.91
MECP2-216ENST00000627864 PLEKHG4Q58EX7 1191 aa20.76■□□□□ 0.91
MECP2-216ENST00000627864 HAUS6Q7Z4H7 955 aa20.76■□□□□ 0.91
MECP2-216ENST00000627864 VWCEQ96DN2 955 aa20.76■□□□□ 0.91
MECP2-216ENST00000627864 MRPL44Q9H9J2 332 aaKnown RBP20.76■□□□□ 0.91
MECP2-216ENST00000627864 ERVK-5Q9HDB9 667 aa20.76■□□□□ 0.91
MECP2-216ENST00000627864 K7ENM7 598 aa20.75■□□□□ 0.91
MECP2-216ENST00000627864 K7ERI5 159 aa20.75■□□□□ 0.91
MECP2-216ENST00000627864 EPHB4P54760 987 aa20.75■□□□□ 0.91
MECP2-216ENST00000627864 CAMK4Q16566 473 aa20.75■□□□□ 0.91
MECP2-216ENST00000627864 KMT5BQ4FZB7 885 aa20.75■□□□□ 0.91
MECP2-216ENST00000627864 ELOA2Q8IYF1 753 aaPredicted RBP20.75■□□□□ 0.91
MECP2-216ENST00000627864 ERCC4Q92889 916 aaPredicted RBP20.75■□□□□ 0.91
MECP2-216ENST00000627864 HPS3Q969F9 1004 aa20.75■□□□□ 0.91
MECP2-216ENST00000627864 CCDC47Q96A33 483 aaKnown RBP20.75■□□□□ 0.91
MECP2-216ENST00000627864 ARHGAP28Q9P2N2 729 aa20.75■□□□□ 0.91
MECP2-216ENST00000627864 DENND3A2RUS2 1198 aa20.74■□□□□ 0.91
MECP2-216ENST00000627864 H0YCG3 227 aa20.74■□□□□ 0.91
MECP2-216ENST00000627864 ERLIN2O94905 339 aa20.74■□□□□ 0.91
MECP2-216ENST00000627864 MBD3O95983 291 aa20.74■□□□□ 0.91
MECP2-216ENST00000627864 PRKCBP05771 671 aa20.74■□□□□ 0.91
MECP2-216ENST00000627864 PFKMP08237 780 aa20.74■□□□□ 0.91
MECP2-216ENST00000627864 MAPK6Q16659 721 aa20.74■□□□□ 0.91
MECP2-216ENST00000627864 TCTN1Q2MV58 587 aa20.74■□□□□ 0.91
MECP2-216ENST00000627864 CNKSR3Q6P9H4 555 aa20.74■□□□□ 0.91
MECP2-216ENST00000627864 C16orf59Q7L2K0 433 aa20.74■□□□□ 0.91
MECP2-216ENST00000627864 TMEM161BQ8NDZ6 487 aa20.74■□□□□ 0.91
MECP2-216ENST00000627864 FIZ1Q96SL8 496 aa20.74■□□□□ 0.91
MECP2-216ENST00000627864 CCDC113Q9H0I3 377 aa20.74■□□□□ 0.91
MECP2-216ENST00000627864 TMEM134Q9H6X4 195 aa20.74■□□□□ 0.91
MECP2-216ENST00000627864 OLFML3Q9NRN5 406 aa20.74■□□□□ 0.91
MECP2-216ENST00000627864 EXOC1Q9NV70 894 aa20.74■□□□□ 0.91
MECP2-216ENST00000627864 PRMT7Q9NVM4 692 aaPredicted RBP20.74■□□□□ 0.91
MECP2-216ENST00000627864 SMC2O95347 1197 aa20.73■□□□□ 0.91
MECP2-216ENST00000627864 FGBP02675 491 aa20.73■□□□□ 0.91
MECP2-216ENST00000627864 MAPTP10636 758 aaKnown RBP20.73■□□□□ 0.91
MECP2-216ENST00000627864 ZC2HC1CQ53FD0 456 aaPredicted RBP20.73■□□□□ 0.91
MECP2-216ENST00000627864 FAM26FQ5R3K3 315 aa20.73■□□□□ 0.91
MECP2-216ENST00000627864 ZNF365Q70YC5 407 aa20.73■□□□□ 0.91
MECP2-216ENST00000627864 ZNF720Q7Z2F6 126 aa20.73■□□□□ 0.91
MECP2-216ENST00000627864 SLC17A8Q8NDX2 589 aa20.73■□□□□ 0.91
MECP2-216ENST00000627864 APBB2Q92870 758 aa20.73■□□□□ 0.91
MECP2-216ENST00000627864 SMARCE1Q969G3 411 aa20.73■□□□□ 0.91
MECP2-216ENST00000627864 FZD8Q9H461 694 aa20.73■□□□□ 0.91
MECP2-216ENST00000627864 CLSTN2Q9H4D0 955 aa20.73■□□□□ 0.91
MECP2-216ENST00000627864 PCDHA5Q9Y5H7 936 aa20.73■□□□□ 0.91
MECP2-216ENST00000627864 PHLPP2Q6ZVD8 1323 aa20.73■□□□□ 0.91
MECP2-216ENST00000627864 TSPAN1O60635 241 aa20.72■□□□□ 0.91
MECP2-216ENST00000627864 GCNT3O95395 438 aa20.72■□□□□ 0.91
MECP2-216ENST00000627864 ACTN1P12814 892 aa20.72■□□□□ 0.91
MECP2-216ENST00000627864 PTMSP20962 102 aa20.72■□□□□ 0.91
MECP2-216ENST00000627864 EHHADHQ08426 723 aa20.72■□□□□ 0.91
MECP2-216ENST00000627864 NCBP1Q09161 790 aaKnown RBP20.72■□□□□ 0.91
MECP2-216ENST00000627864 STRN3Q13033 797 aa20.72■□□□□ 0.91
MECP2-216ENST00000627864 IKBKEQ14164 716 aa20.72■□□□□ 0.91
MECP2-216ENST00000627864 PCBP1Q15365 356 aaKnown RBP eCLIP20.72■□□□□ 0.91
MECP2-216ENST00000627864 FAM187BQ17R55 369 aa20.72■□□□□ 0.91
MECP2-216ENST00000627864 TMEM132AQ24JP5 1023 aa20.72■□□□□ 0.91
MECP2-216ENST00000627864 TMEM240Q5SV17 173 aa20.72■□□□□ 0.91
MECP2-216ENST00000627864 TAS1R3Q7RTX0 852 aa20.72■□□□□ 0.91
MECP2-216ENST00000627864 BUD13Q9BRD0 619 aaKnown RBP eCLIP20.72■□□□□ 0.911e-7■■□□□ 11.9
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms