RNA–Protein interactions for RNA: ENST00000627109.2

CTNNA1-244, Transcript of catenin alpha 1, humanhuman

TSL 5 BASIC

Gene CTNNA1, Length 3,831 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-244ENST00000627109 STK33Q9BYT3 514 aa7.8□□□□□ -1.16
CTNNA1-244ENST00000627109 SMARCAL1Q9NZC9 954 aa7.8□□□□□ -1.16
CTNNA1-244ENST00000627109 DIS3Q9Y2L1 958 aaKnown RBP7.8□□□□□ -1.16
CTNNA1-244ENST00000627109 ANKRD65E5RJM6 399 aa7.79□□□□□ -1.16
CTNNA1-244ENST00000627109 P4HA2O15460 535 aa7.79□□□□□ -1.16
CTNNA1-244ENST00000627109 DHX15O43143 795 aaKnown RBP7.79□□□□□ -1.16
CTNNA1-244ENST00000627109 ATXN8OSP0DMR3 200 aa7.79□□□□□ -1.16
CTNNA1-244ENST00000627109 ACTN1P12814 892 aa7.79□□□□□ -1.16
CTNNA1-244ENST00000627109 CASP4P49662 377 aa7.79□□□□□ -1.16
CTNNA1-244ENST00000627109 ALCAMQ13740 583 aa7.79□□□□□ -1.16
CTNNA1-244ENST00000627109 IFI16Q16666 785 aaKnown RBP7.79□□□□□ -1.16
CTNNA1-244ENST00000627109 PPP1R3FQ6ZSY5 799 aaPredicted RBP7.79□□□□□ -1.16
CTNNA1-244ENST00000627109 FAM83AQ86UY5 434 aa7.79□□□□□ -1.16
CTNNA1-244ENST00000627109 LDHDQ86WU2 507 aa7.79□□□□□ -1.16
CTNNA1-244ENST00000627109 IFT20Q8IY31 132 aa7.79□□□□□ -1.16
CTNNA1-244ENST00000627109 DAW1Q8N136 415 aa7.79□□□□□ -1.16
CTNNA1-244ENST00000627109 LNX1Q8TBB1 728 aaPredicted RBP7.79□□□□□ -1.16
CTNNA1-244ENST00000627109 RIN2Q8WYP3 895 aaPredicted RBP7.79□□□□□ -1.16
CTNNA1-244ENST00000627109 WDR11Q9BZH6 1224 aa7.79□□□□□ -1.16
CTNNA1-244ENST00000627109 ISCUQ9H1K1 167 aa7.79□□□□□ -1.16
CTNNA1-244ENST00000627109 BHMT2Q9H2M3 363 aa7.79□□□□□ -1.16
CTNNA1-244ENST00000627109 GOPCQ9HD26 462 aa7.79□□□□□ -1.16
CTNNA1-244ENST00000627109 EHD2Q9NZN4 543 aa7.79□□□□□ -1.16
CTNNA1-244ENST00000627109 CSADQ9Y600 493 aa7.79□□□□□ -1.16
CTNNA1-244ENST00000627109 GOLGA6BA6NDN3 693 aa7.79□□□□□ -1.16
CTNNA1-244ENST00000627109 TMCO5BA8MYB1 307 aa7.79□□□□□ -1.16
CTNNA1-244ENST00000627109 H0YGN5 161 aa7.79□□□□□ -1.16
CTNNA1-244ENST00000627109 MTA2O94776 668 aa7.79□□□□□ -1.16
CTNNA1-244ENST00000627109 PSMC2P35998 433 aaKnown RBP7.79□□□□□ -1.16
CTNNA1-244ENST00000627109 KIAA0753Q2KHM9 967 aa7.79□□□□□ -1.16
CTNNA1-244ENST00000627109 TTMPQ5BVD1 217 aa7.79□□□□□ -1.16
CTNNA1-244ENST00000627109 LRIG3Q6UXM1 1119 aa7.79□□□□□ -1.16
CTNNA1-244ENST00000627109 NT5DC3Q86UY8 548 aa7.79□□□□□ -1.16
CTNNA1-244ENST00000627109 ZKSCAN4Q969J2 545 aaPredicted RBP7.79□□□□□ -1.16
CTNNA1-244ENST00000627109 SLC10A4Q96EP9 437 aa7.79□□□□□ -1.16
CTNNA1-244ENST00000627109 TXLNGYQ9BZA5 131 aa7.79□□□□□ -1.16
CTNNA1-244ENST00000627109 VCPKMTQ9H867 229 aa7.79□□□□□ -1.16
CTNNA1-244ENST00000627109 ADAMTS1Q9UHI8 967 aa7.79□□□□□ -1.16
CTNNA1-244ENST00000627109 ZBTB21Q9ULJ3 1066 aa7.79□□□□□ -1.16
CTNNA1-244ENST00000627109 NFS1Q9Y697 457 aa7.79□□□□□ -1.16
CTNNA1-244ENST00000627109 SSC5DA1L4H1 1573 aa7.79□□□□□ -1.16
CTNNA1-244ENST00000627109 CLGNO14967 610 aa7.79□□□□□ -1.16
CTNNA1-244ENST00000627109 TMEM253P0C7T8 217 aa7.79□□□□□ -1.16
CTNNA1-244ENST00000627109 SOX5P35711 763 aa7.79□□□□□ -1.16
CTNNA1-244ENST00000627109 FMO5P49326 533 aa7.79□□□□□ -1.16
CTNNA1-244ENST00000627109 CYP4A11Q02928 519 aa7.79□□□□□ -1.16
CTNNA1-244ENST00000627109 KCNA1Q09470 495 aa7.79□□□□□ -1.16
CTNNA1-244ENST00000627109 HLTFQ14527 1009 aaKnown RBP eCLIP7.79□□□□□ -1.16
CTNNA1-244ENST00000627109 CEP55Q53EZ4 464 aa7.79□□□□□ -1.16
CTNNA1-244ENST00000627109 C8orf74Q6P047 294 aa7.79□□□□□ -1.16
CTNNA1-244ENST00000627109 GET4Q7L5D6 327 aaPredicted RBP7.79□□□□□ -1.16
CTNNA1-244ENST00000627109 SRLQ86TD4 932 aa7.79□□□□□ -1.16
CTNNA1-244ENST00000627109 SMC1BQ8NDV3 1235 aa7.79□□□□□ -1.16
CTNNA1-244ENST00000627109 TAF4BQ92750 862 aa7.79□□□□□ -1.16
CTNNA1-244ENST00000627109 MS4A14Q96JA4 679 aa7.79□□□□□ -1.16
CTNNA1-244ENST00000627109 NACC1Q96RE7 527 aa7.79□□□□□ -1.16
CTNNA1-244ENST00000627109 TIPINQ9BVW5 301 aa7.79□□□□□ -1.16
CTNNA1-244ENST00000627109 UNC45AQ9H3U1 944 aa7.79□□□□□ -1.16
CTNNA1-244ENST00000627109 BCAS3Q9H6U6 928 aa7.79□□□□□ -1.16
CTNNA1-244ENST00000627109 PARVGQ9HBI0 331 aa7.79□□□□□ -1.16
CTNNA1-244ENST00000627109 ARHGEF10LQ9HCE6 1279 aa7.79□□□□□ -1.16
CTNNA1-244ENST00000627109 PICK1Q9NRD5 415 aa7.79□□□□□ -1.16
CTNNA1-244ENST00000627109 FEM1BQ9UK73 627 aa7.79□□□□□ -1.16
CTNNA1-244ENST00000627109 KIAA1217Q5T5P2 1943 aa7.78□□□□□ -1.16
CTNNA1-244ENST00000627109 PCNTO95613 3336 aa7.78□□□□□ -1.16
CTNNA1-244ENST00000627109 CCDC188H7C350 402 aa7.78□□□□□ -1.16
CTNNA1-244ENST00000627109 DDX3YO15523 660 aaKnown RBP7.78□□□□□ -1.16
CTNNA1-244ENST00000627109 FLOT1O75955 427 aa7.78□□□□□ -1.16
CTNNA1-244ENST00000627109 ZNF280AP59817 542 aaPredicted RBP7.78□□□□□ -1.16
CTNNA1-244ENST00000627109 PPFIA1Q13136 1202 aa7.78□□□□□ -1.16
CTNNA1-244ENST00000627109 CUL1Q13616 776 aa7.78□□□□□ -1.16
CTNNA1-244ENST00000627109 CASKIN2Q8WXE0 1202 aa7.78□□□□□ -1.16
CTNNA1-244ENST00000627109 AGPAT3Q9NRZ7 376 aa7.78□□□□□ -1.16
CTNNA1-244ENST00000627109 GINM1Q9NU53 330 aa7.78□□□□□ -1.16
CTNNA1-244ENST00000627109 GCOM1H8Y6P7 765 aaPredicted RBP7.78□□□□□ -1.16
CTNNA1-244ENST00000627109 CHMP2AO43633 222 aa7.78□□□□□ -1.16
CTNNA1-244ENST00000627109 PPFIA4O75335 1185 aa7.78□□□□□ -1.16
CTNNA1-244ENST00000627109 POLR2MP0CAP2 368 aa7.78□□□□□ -1.16
CTNNA1-244ENST00000627109 PAK2Q13177 524 aa7.78□□□□□ -1.16
CTNNA1-244ENST00000627109 C1orf220Q5T0J3 134 aa7.78□□□□□ -1.16
CTNNA1-244ENST00000627109 TTC19Q6DKK2 380 aaPredicted RBP7.78□□□□□ -1.16
CTNNA1-244ENST00000627109 ALKBH5Q6P6C2 394 aaKnown RBP7.78□□□□□ -1.16
CTNNA1-244ENST00000627109 KDM7AQ6ZMT4 941 aa7.78□□□□□ -1.16
CTNNA1-244ENST00000627109 ARMC9Q7Z3E5 817 aa7.78□□□□□ -1.16
CTNNA1-244ENST00000627109 CLEC4DQ8WXI8 215 aa7.78□□□□□ -1.16
CTNNA1-244ENST00000627109 RNF25Q96BH1 459 aaPredicted RBP7.78□□□□□ -1.16
CTNNA1-244ENST00000627109 CDCA5Q96FF9 252 aa7.78□□□□□ -1.16
CTNNA1-244ENST00000627109 DYDC2Q96IM9 177 aa7.78□□□□□ -1.16
CTNNA1-244ENST00000627109 L3MBTL3Q96JM7 780 aaPredicted RBP7.78□□□□□ -1.16
CTNNA1-244ENST00000627109 MXRA8Q9BRK3 442 aa7.78□□□□□ -1.16
CTNNA1-244ENST00000627109 MAF1Q9H063 256 aa7.78□□□□□ -1.16
CTNNA1-244ENST00000627109 TSPYL1Q9H0U9 437 aa7.78□□□□□ -1.16
CTNNA1-244ENST00000627109 EHMT1Q9H9B1 1298 aa7.78□□□□□ -1.16
CTNNA1-244ENST00000627109 RGL1Q9NZL6 768 aa7.78□□□□□ -1.16
CTNNA1-244ENST00000627109 GCNT4Q9P109 453 aa7.78□□□□□ -1.16
CTNNA1-244ENST00000627109 MRPL11Q9Y3B7 192 aaKnown RBP7.78□□□□□ -1.16
CTNNA1-244ENST00000627109 UBIAD1Q9Y5Z9 338 aa7.78□□□□□ -1.16
CTNNA1-244ENST00000627109 OPA1O60313 960 aa7.78□□□□□ -1.16
CTNNA1-244ENST00000627109 ECE1P42892 770 aa7.78□□□□□ -1.16
CTNNA1-244ENST00000627109 ZNF157P51786 506 aaPredicted RBP7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms