RNA–Protein interactions for RNA: ENST00000622702.1

PDLIM2-221, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5 BASIC

Gene PDLIM2, Length 1,490 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-221ENST00000622702 FAM178BQ8IXR5 827 aa21.88■■□□□ 1.09
PDLIM2-221ENST00000622702 RPUSD2Q8IZ73 545 aaKnown RBP21.88■■□□□ 1.09
PDLIM2-221ENST00000622702 TRIML1Q8N9V2 468 aa21.88■■□□□ 1.09
PDLIM2-221ENST00000622702 RNF149Q8NC42 400 aa21.88■■□□□ 1.09
PDLIM2-221ENST00000622702 SLC17A8Q8NDX2 589 aa21.88■■□□□ 1.09
PDLIM2-221ENST00000622702 NFKBIZQ9BYH8 718 aa21.88■■□□□ 1.09
PDLIM2-221ENST00000622702 ADAMTS10Q9H324 1103 aa21.88■■□□□ 1.09
PDLIM2-221ENST00000622702 MAN1B1Q9UKM7 699 aa21.88■■□□□ 1.09
PDLIM2-221ENST00000622702 GPR32O75388 356 aa21.87■■□□□ 1.09
PDLIM2-221ENST00000622702 LETM1O95202 739 aaPredicted RBP21.87■■□□□ 1.09
PDLIM2-221ENST00000622702 CTSHP09668 335 aa21.87■■□□□ 1.09
PDLIM2-221ENST00000622702 SCP2P22307 547 aa21.87■■□□□ 1.09
PDLIM2-221ENST00000622702 NLRP11P59045 1033 aaKnown RBP21.87■■□□□ 1.09
PDLIM2-221ENST00000622702 MRPS6P82932 125 aaKnown RBP21.87■■□□□ 1.09
PDLIM2-221ENST00000622702 SHHQ15465 462 aa21.87■■□□□ 1.09
PDLIM2-221ENST00000622702 CDCA2Q69YH5 1023 aaPredicted RBP21.87■■□□□ 1.09
PDLIM2-221ENST00000622702 TRAF7Q6Q0C0 670 aa21.87■■□□□ 1.09
PDLIM2-221ENST00000622702 IFNLR1Q8IU57 520 aaPredicted RBP21.87■■□□□ 1.09
PDLIM2-221ENST00000622702 NLRP4Q96MN2 994 aa21.87■■□□□ 1.09
PDLIM2-221ENST00000622702 BUD13Q9BRD0 619 aaKnown RBP eCLIP21.87■■□□□ 1.091e-6■■■■□ 19.3
PDLIM2-221ENST00000622702 GTPBP4Q9BZE4 634 aaKnown RBP21.87■■□□□ 1.09
PDLIM2-221ENST00000622702 ST6GALNAC4Q9H4F1 302 aa21.87■■□□□ 1.09
PDLIM2-221ENST00000622702 KMT5AQ9NQR1 393 aa21.87■■□□□ 1.09
PDLIM2-221ENST00000622702 ARHGAP28Q9P2N2 729 aa21.87■■□□□ 1.09
PDLIM2-221ENST00000622702 LAMA3Q16787 3333 aa21.86■■□□□ 1.09
PDLIM2-221ENST00000622702 A0A1W2PPC1 479 aa21.86■■□□□ 1.09
PDLIM2-221ENST00000622702 LRRIQ4A6NIV6 560 aa21.86■■□□□ 1.09
PDLIM2-221ENST00000622702 CCDC169A6NNP5 214 aa21.86■■□□□ 1.09
PDLIM2-221ENST00000622702 SRGAP2CP0DJJ0 459 aa21.86■■□□□ 1.09
PDLIM2-221ENST00000622702 PTENP60484 403 aa21.86■■□□□ 1.09
PDLIM2-221ENST00000622702 MORC3Q14149 939 aa21.86■■□□□ 1.09
PDLIM2-221ENST00000622702 FAM26DQ5JW98 314 aa21.86■■□□□ 1.09
PDLIM2-221ENST00000622702 ZNF720Q7Z2F6 126 aa21.86■■□□□ 1.09
PDLIM2-221ENST00000622702 DEPTORQ8TB45 409 aa21.86■■□□□ 1.09
PDLIM2-221ENST00000622702 HPS3Q969F9 1004 aa21.86■■□□□ 1.09
PDLIM2-221ENST00000622702 VWCEQ96DN2 955 aa21.86■■□□□ 1.09
PDLIM2-221ENST00000622702 MRPL44Q9H9J2 332 aaKnown RBP21.86■■□□□ 1.09
PDLIM2-221ENST00000622702 IFT122Q9HBG6 1241 aa21.86■■□□□ 1.09
PDLIM2-221ENST00000622702 ADGRA3Q8IWK6 1321 aa21.86■■□□□ 1.09
PDLIM2-221ENST00000622702 TRIOBPQ9H2D6 2365 aa21.86■■□□□ 1.09
PDLIM2-221ENST00000622702 A0A087WZ62 844 aa21.85■■□□□ 1.09
PDLIM2-221ENST00000622702 H0YCG3 227 aa21.85■■□□□ 1.09
PDLIM2-221ENST00000622702 SLC16A4O15374 487 aa21.85■■□□□ 1.09
PDLIM2-221ENST00000622702 PHKA2P46019 1235 aa21.85■■□□□ 1.09
PDLIM2-221ENST00000622702 MGAT3Q09327 533 aa21.85■■□□□ 1.09
PDLIM2-221ENST00000622702 TMEM62Q0P6H9 643 aa21.85■■□□□ 1.09
PDLIM2-221ENST00000622702 STK4Q13043 487 aa21.85■■□□□ 1.09
PDLIM2-221ENST00000622702 GPNMBQ14956 572 aa21.85■■□□□ 1.09
PDLIM2-221ENST00000622702 KIZQ2M2Z5 673 aa21.85■■□□□ 1.09
PDLIM2-221ENST00000622702 TMEM240Q5SV17 173 aa21.85■■□□□ 1.09
PDLIM2-221ENST00000622702 ZNF658Q5TYW1 1059 aaPredicted RBP21.85■■□□□ 1.09
PDLIM2-221ENST00000622702 PSRC1Q6PGN9 363 aaPredicted RBP21.85■■□□□ 1.09
PDLIM2-221ENST00000622702 ZNF365Q70YC5 407 aa21.85■■□□□ 1.09
PDLIM2-221ENST00000622702 TMEM161BQ8NDZ6 487 aa21.85■■□□□ 1.09
PDLIM2-221ENST00000622702 NLRP7Q8WX94 980 aa21.85■■□□□ 1.09
PDLIM2-221ENST00000622702 FDXACB1Q9BRP7 624 aaPredicted RBP21.85■■□□□ 1.09
PDLIM2-221ENST00000622702 CELF4Q9BZC1 486 aaKnown RBP21.85■■□□□ 1.09
PDLIM2-221ENST00000622702 C2orf40Q9H1Z8 148 aa21.85■■□□□ 1.09
PDLIM2-221ENST00000622702 TBC1D7Q9P0N9 293 aa21.85■■□□□ 1.09
PDLIM2-221ENST00000622702 TRPV2Q9Y5S1 764 aa21.85■■□□□ 1.09
PDLIM2-221ENST00000622702 M0QZ92 97 aa21.84■■□□□ 1.09
PDLIM2-221ENST00000622702 PPP1R37O75864 691 aa21.84■■□□□ 1.09
PDLIM2-221ENST00000622702 PARNO95453 639 aaKnown RBP21.84■■□□□ 1.09
PDLIM2-221ENST00000622702 FGBP02675 491 aa21.84■■□□□ 1.09
PDLIM2-221ENST00000622702 NMT1P30419 496 aaKnown RBP21.84■■□□□ 1.09
PDLIM2-221ENST00000622702 ABCD1P33897 745 aa21.84■■□□□ 1.09
PDLIM2-221ENST00000622702 EFNA5P52803 228 aa21.84■■□□□ 1.09
PDLIM2-221ENST00000622702 CRYBB1P53674 252 aaPredicted RBP21.84■■□□□ 1.09
PDLIM2-221ENST00000622702 ALCAMQ13740 583 aa21.84■■□□□ 1.09
PDLIM2-221ENST00000622702 MBTPS1Q14703 1052 aa21.84■■□□□ 1.09
PDLIM2-221ENST00000622702 HABP4Q5JVS0 413 aaKnown RBP21.84■■□□□ 1.09
PDLIM2-221ENST00000622702 HAUS6Q7Z4H7 955 aa21.84■■□□□ 1.09
PDLIM2-221ENST00000622702 KIAA0895Q8NCT3 520 aa21.84■■□□□ 1.09
PDLIM2-221ENST00000622702 KIFC3Q9BVG8 833 aa21.84■■□□□ 1.09
PDLIM2-221ENST00000622702 STRA6Q9BX79 667 aa21.84■■□□□ 1.09
PDLIM2-221ENST00000622702 CDY2AQ9Y6F7 541 aa21.84■■□□□ 1.09
PDLIM2-221ENST00000622702 K7ENM7 598 aa21.83■■□□□ 1.09
PDLIM2-221ENST00000622702 BIN1O00499 593 aa21.83■■□□□ 1.09
PDLIM2-221ENST00000622702 NBNO60934 754 aa21.83■■□□□ 1.09
PDLIM2-221ENST00000622702 CHRNA1P02708 482 aa21.83■■□□□ 1.09
PDLIM2-221ENST00000622702 PFKMP08237 780 aa21.83■■□□□ 1.09
PDLIM2-221ENST00000622702 BMP6P22004 513 aa21.83■■□□□ 1.09
PDLIM2-221ENST00000622702 GTF2BQ00403 316 aa21.83■■□□□ 1.09
PDLIM2-221ENST00000622702 ZSCAN23Q3MJ62 389 aa21.83■■□□□ 1.09
PDLIM2-221ENST00000622702 EPM2AIP1Q7L775 607 aaPredicted RBP21.83■■□□□ 1.09
PDLIM2-221ENST00000622702 SRGAP1Q7Z6B7 1085 aa21.83■■□□□ 1.09
PDLIM2-221ENST00000622702 ZBTB8OSQ8IWT0 167 aa21.83■■□□□ 1.09
PDLIM2-221ENST00000622702 ZNF668Q96K58 619 aaPredicted RBP21.83■■□□□ 1.09
PDLIM2-221ENST00000622702 SCLT1Q96NL6 688 aa21.83■■□□□ 1.09
PDLIM2-221ENST00000622702 PPP1R16BQ96T49 567 aa21.83■■□□□ 1.09
PDLIM2-221ENST00000622702 FGFBP2Q9BYJ0 223 aa21.83■■□□□ 1.09
PDLIM2-221ENST00000622702 GCOM2Q9BZD3 368 aaPredicted RBP21.83■■□□□ 1.09
PDLIM2-221ENST00000622702 TMEM134Q9H6X4 195 aa21.83■■□□□ 1.09
PDLIM2-221ENST00000622702 SLC39A2Q9NP94 309 aa21.83■■□□□ 1.09
PDLIM2-221ENST00000622702 PHLPP2Q6ZVD8 1323 aa21.83■■□□□ 1.09
PDLIM2-221ENST00000622702 RBAK-RBAKDNI3L0D1 243 aa21.83■■□□□ 1.08
PDLIM2-221ENST00000622702 EIF3DO15371 548 aaKnown RBP eCLIP21.83■■□□□ 1.08
PDLIM2-221ENST00000622702 GCNT3O95395 438 aa21.83■■□□□ 1.08
PDLIM2-221ENST00000622702 DARSP14868 501 aaKnown RBP21.83■■□□□ 1.08
PDLIM2-221ENST00000622702 CASP5P51878 434 aa21.83■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms