RNA–Protein interactions for RNA: ENST00000622555.1

PTCHD3-202, Transcript of patched domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene PTCHD3, Length 1,720 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3-202ENST00000622555 PRDM10Q9NQV6 1147 aa19.59■□□□□ 0.73
PTCHD3-202ENST00000622555 STARD7Q9NQZ5 370 aa19.59■□□□□ 0.73
PTCHD3-202ENST00000622555 NFE2L3Q9Y4A8 694 aa19.59■□□□□ 0.73
PTCHD3-202ENST00000622555 TTI2Q6NXR4 508 aa19.59■□□□□ 0.73
PTCHD3-202ENST00000622555 U2AF1L4Q8WU68 220 aaKnown RBP19.59■□□□□ 0.73
PTCHD3-202ENST00000622555 TBX20Q9UMR3 447 aa19.59■□□□□ 0.73
PTCHD3-202ENST00000622555 ZMYM2Q9UBW7 1377 aa19.58■□□□□ 0.73
PTCHD3-202ENST00000622555 TFRCP02786 760 aaKnown RBP19.58■□□□□ 0.72
PTCHD3-202ENST00000622555 SCP2P22307 547 aa19.58■□□□□ 0.72
PTCHD3-202ENST00000622555 ABCD1P33897 745 aa19.58■□□□□ 0.72
PTCHD3-202ENST00000622555 TPM4P67936 248 aa19.58■□□□□ 0.72
PTCHD3-202ENST00000622555 LRRC63Q05C16 580 aa19.58■□□□□ 0.72
PTCHD3-202ENST00000622555 ZBTB8OSQ8IWT0 167 aa19.58■□□□□ 0.72
PTCHD3-202ENST00000622555 DNAJB3Q8WWF6 145 aa19.58■□□□□ 0.72
PTCHD3-202ENST00000622555 SCLT1Q96NL6 688 aa19.58■□□□□ 0.72
PTCHD3-202ENST00000622555 TMEM206Q9H813 350 aa19.58■□□□□ 0.72
PTCHD3-202ENST00000622555 A0A0U1RQG5 324 aaPredicted RBP19.57■□□□□ 0.72
PTCHD3-202ENST00000622555 SGPL1O95470 568 aa19.57■□□□□ 0.72
PTCHD3-202ENST00000622555 PTPN11Q06124 597 aaPredicted RBP19.57■□□□□ 0.72
PTCHD3-202ENST00000622555 ZCWPW2Q504Y3 356 aa19.57■□□□□ 0.72
PTCHD3-202ENST00000622555 CDCA2Q69YH5 1023 aaPredicted RBP19.57■□□□□ 0.72
PTCHD3-202ENST00000622555 TAF2Q6P1X5 1199 aa19.57■□□□□ 0.72
PTCHD3-202ENST00000622555 DUSP9Q99956 384 aaKnown RBP19.57■□□□□ 0.72
PTCHD3-202ENST00000622555 CRISPLD2Q9H0B8 497 aa19.57■□□□□ 0.72
PTCHD3-202ENST00000622555 C2orf40Q9H1Z8 148 aa19.57■□□□□ 0.72
PTCHD3-202ENST00000622555 IKZF4Q9H2S9 585 aa19.57■□□□□ 0.72
PTCHD3-202ENST00000622555 TYW1Q9NV66 732 aaKnown RBP19.57■□□□□ 0.72
PTCHD3-202ENST00000622555 FANCLQ9NW38 375 aa19.57■□□□□ 0.72
PTCHD3-202ENST00000622555 EXOC7Q9UPT5 735 aa19.57■□□□□ 0.72
PTCHD3-202ENST00000622555 PHLPP2Q6ZVD8 1323 aa19.57■□□□□ 0.72
PTCHD3-202ENST00000622555 K7ERI5 159 aa19.56■□□□□ 0.72
PTCHD3-202ENST00000622555 PDXKO00764 312 aa19.56■□□□□ 0.72
PTCHD3-202ENST00000622555 CALUO43852 315 aaPredicted RBP19.56■□□□□ 0.72
PTCHD3-202ENST00000622555 PHKA2P46019 1235 aa19.56■□□□□ 0.72
PTCHD3-202ENST00000622555 EFNA5P52803 228 aa19.56■□□□□ 0.72
PTCHD3-202ENST00000622555 STRN3Q13033 797 aa19.56■□□□□ 0.72
PTCHD3-202ENST00000622555 PTGISQ16647 500 aa19.56■□□□□ 0.72
PTCHD3-202ENST00000622555 UVSSAQ2YD98 709 aa19.56■□□□□ 0.72
PTCHD3-202ENST00000622555 PPP4R3CPQ6ZMV5 832 aa19.56■□□□□ 0.72
PTCHD3-202ENST00000622555 TAS1R3Q7RTX0 852 aa19.56■□□□□ 0.72
PTCHD3-202ENST00000622555 MAP4K3Q8IVH8 894 aa19.56■□□□□ 0.72
PTCHD3-202ENST00000622555 CSGALNACT2Q8N6G5 542 aa19.56■□□□□ 0.72
PTCHD3-202ENST00000622555 NLRP7Q8WX94 980 aa19.56■□□□□ 0.72
PTCHD3-202ENST00000622555 GBP3Q9H0R5 595 aa19.56■□□□□ 0.72
PTCHD3-202ENST00000622555 A0A087WZ62 844 aa19.56■□□□□ 0.72
PTCHD3-202ENST00000622555 GPC3P51654 580 aa19.56■□□□□ 0.72
PTCHD3-202ENST00000622555 NLRP11P59045 1033 aaKnown RBP19.56■□□□□ 0.72
PTCHD3-202ENST00000622555 PTENP60484 403 aa19.56■□□□□ 0.72
PTCHD3-202ENST00000622555 TMEM62Q0P6H9 643 aa19.56■□□□□ 0.72
PTCHD3-202ENST00000622555 CCDC173Q0VFZ6 552 aa19.56■□□□□ 0.72
PTCHD3-202ENST00000622555 HS2ST1Q7LGA3 356 aa19.56■□□□□ 0.72
PTCHD3-202ENST00000622555 FDXACB1Q9BRP7 624 aaPredicted RBP19.56■□□□□ 0.72
PTCHD3-202ENST00000622555 TMEM134Q9H6X4 195 aa19.56■□□□□ 0.72
PTCHD3-202ENST00000622555 TRAF3IP3Q9Y228 551 aa19.56■□□□□ 0.72
PTCHD3-202ENST00000622555 TGFB1I1O43294 461 aa19.55■□□□□ 0.72
PTCHD3-202ENST00000622555 CDC42EP1Q00587 391 aa19.55■□□□□ 0.72
PTCHD3-202ENST00000622555 POU5F1BQ06416 359 aa19.55■□□□□ 0.72
PTCHD3-202ENST00000622555 KIZQ2M2Z5 673 aa19.55■□□□□ 0.72
PTCHD3-202ENST00000622555 HSP90AA4PQ58FG1 418 aa19.55■□□□□ 0.72
PTCHD3-202ENST00000622555 FOXR2Q6PJQ5 311 aa19.55■□□□□ 0.72
PTCHD3-202ENST00000622555 SERINC5Q86VE9 423 aa19.55■□□□□ 0.72
PTCHD3-202ENST00000622555 ZNF410Q86VK4 478 aa19.55■□□□□ 0.72
PTCHD3-202ENST00000622555 KCNN1Q92952 543 aa19.55■□□□□ 0.72
PTCHD3-202ENST00000622555 BICD1Q96G01 975 aa19.55■□□□□ 0.72
PTCHD3-202ENST00000622555 SRRTQ9BXP5 876 aaKnown RBP19.55■□□□□ 0.72
PTCHD3-202ENST00000622555 HSD3B7Q9H2F3 369 aa19.55■□□□□ 0.72
PTCHD3-202ENST00000622555 IFT122Q9HBG6 1241 aa19.55■□□□□ 0.72
PTCHD3-202ENST00000622555 SAMSN1Q9NSI8 373 aaKnown RBP19.55■□□□□ 0.72
PTCHD3-202ENST00000622555 NOD1Q9Y239 953 aa19.55■□□□□ 0.72
PTCHD3-202ENST00000622555 EDRF1Q3B7T1 1238 aa19.54■□□□□ 0.72
PTCHD3-202ENST00000622555 NME8Q8N427 588 aa19.54■□□□□ 0.72
PTCHD3-202ENST00000622555 SLC43A3Q8NBI5 491 aa19.54■□□□□ 0.72
PTCHD3-202ENST00000622555 GOLGA5Q8TBA6 731 aa19.54■□□□□ 0.72
PTCHD3-202ENST00000622555 EEF2KMTQ96G04 330 aa19.54■□□□□ 0.72
PTCHD3-202ENST00000622555 NFKBIZQ9BYH8 718 aa19.54■□□□□ 0.72
PTCHD3-202ENST00000622555 MCOLN1Q9GZU1 580 aa19.54■□□□□ 0.72
PTCHD3-202ENST00000622555 CCDC113Q9H0I3 377 aa19.54■□□□□ 0.72
PTCHD3-202ENST00000622555 TRMT13Q9NUP7 481 aaKnown RBP19.54■□□□□ 0.72
PTCHD3-202ENST00000622555 GINS2Q9Y248 185 aa19.54■□□□□ 0.72
PTCHD3-202ENST00000622555 KIAA0100Q14667 2235 aaKnown RBP19.54■□□□□ 0.72
PTCHD3-202ENST00000622555 INO80B-WBP1J3KQ70 363 aa19.54■□□□□ 0.72
PTCHD3-202ENST00000622555 ARVCFO00192 962 aa19.54■□□□□ 0.72
PTCHD3-202ENST00000622555 CLIC2O15247 247 aa19.54■□□□□ 0.72
PTCHD3-202ENST00000622555 PRKCBP05771 671 aa19.54■□□□□ 0.72
PTCHD3-202ENST00000622555 FKBP3Q00688 224 aaKnown RBP19.54■□□□□ 0.72
PTCHD3-202ENST00000622555 MAPK6Q16659 721 aa19.54■□□□□ 0.72
PTCHD3-202ENST00000622555 RSPH3Q86UC2 560 aa19.54■□□□□ 0.72
PTCHD3-202ENST00000622555 NOC3LQ8WTT2 800 aaKnown RBP19.54■□□□□ 0.72
PTCHD3-202ENST00000622555 PDLIM2Q96JY6 352 aa19.54■□□□□ 0.72
PTCHD3-202ENST00000622555 CTAGE1Q96RT6 745 aa19.54■□□□□ 0.72
PTCHD3-202ENST00000622555 INO80BQ9C086 356 aaPredicted RBP19.54■□□□□ 0.72
PTCHD3-202ENST00000622555 ADAMTS10Q9H324 1103 aa19.54■□□□□ 0.72
PTCHD3-202ENST00000622555 AGPAT3Q9NRZ7 376 aa19.54■□□□□ 0.72
PTCHD3-202ENST00000622555 HNRNPDLO14979 420 aaKnown RBP19.53■□□□□ 0.72
PTCHD3-202ENST00000622555 GPR32O75388 356 aa19.53■□□□□ 0.72
PTCHD3-202ENST00000622555 FGFR1OPO95684 399 aaKnown RBP19.53■□□□□ 0.72
PTCHD3-202ENST00000622555 NR3C1P04150 777 aa19.53■□□□□ 0.72
PTCHD3-202ENST00000622555 GJA8P48165 433 aa19.53■□□□□ 0.72
PTCHD3-202ENST00000622555 PLCB2Q00722 1185 aa19.53■□□□□ 0.72
PTCHD3-202ENST00000622555 MBTD1Q05BQ5 628 aa19.53■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms