RNA–Protein interactions for RNA: ENST00000621999.4

SCAMP1-207, Transcript of secretory carrier membrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCAMP1, Length 4,509 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-207ENST00000621999 SRRDQ9UH36 339 aa13.61□□□□□ -0.23
SCAMP1-207ENST00000621999 FSD2A1L4K1 749 aa13.61□□□□□ -0.23
SCAMP1-207ENST00000621999 N4BP1O75113 896 aaKnown RBP13.61□□□□□ -0.23
SCAMP1-207ENST00000621999 RPS6KA5O75582 802 aa13.61□□□□□ -0.23
SCAMP1-207ENST00000621999 TRIM14Q14142 442 aa13.61□□□□□ -0.23
SCAMP1-207ENST00000621999 C17orf99Q6UX52 265 aa13.61□□□□□ -0.23
SCAMP1-207ENST00000621999 INTS8Q75QN2 995 aaKnown RBP13.61□□□□□ -0.23
SCAMP1-207ENST00000621999 MRFAP1L1Q96HT8 127 aa13.61□□□□□ -0.23
SCAMP1-207ENST00000621999 OSMRQ99650 979 aa13.61□□□□□ -0.23
SCAMP1-207ENST00000621999 GCNT4Q9P109 453 aa13.61□□□□□ -0.23
SCAMP1-207ENST00000621999 GSTTP1A0A1W2PQM5 241 aa13.6□□□□□ -0.23
SCAMP1-207ENST00000621999 ICAM3P32942 547 aa13.6□□□□□ -0.23
SCAMP1-207ENST00000621999 KCNH2Q12809 1159 aa13.6□□□□□ -0.23
SCAMP1-207ENST00000621999 ASIC2Q16515 512 aa13.6□□□□□ -0.23
SCAMP1-207ENST00000621999 QSER1Q2KHR3 1735 aa13.6□□□□□ -0.23
SCAMP1-207ENST00000621999 ZNF792Q3KQV3 632 aa13.6□□□□□ -0.23
SCAMP1-207ENST00000621999 VWA3BQ502W6 1294 aa13.6□□□□□ -0.23
SCAMP1-207ENST00000621999 C1orf186Q6ZWK4 172 aa13.6□□□□□ -0.23
SCAMP1-207ENST00000621999 ELOA2Q8IYF1 753 aaPredicted RBP13.6□□□□□ -0.23
SCAMP1-207ENST00000621999 HSPBP1Q9NZL4 362 aa13.6□□□□□ -0.23
SCAMP1-207ENST00000621999 TBX20Q9UMR3 447 aa13.6□□□□□ -0.23
SCAMP1-207ENST00000621999 KIAA0100Q14667 2235 aaKnown RBP13.6□□□□□ -0.23
SCAMP1-207ENST00000621999 TMCO5BA8MYB1 307 aa13.6□□□□□ -0.23
SCAMP1-207ENST00000621999 TLR3O15455 904 aaKnown RBP13.6□□□□□ -0.23
SCAMP1-207ENST00000621999 CASP14P31944 242 aa13.6□□□□□ -0.23
SCAMP1-207ENST00000621999 PPP2R3AQ06190 1150 aa13.6□□□□□ -0.23
SCAMP1-207ENST00000621999 KLHL30Q0D2K2 578 aa13.6□□□□□ -0.23
SCAMP1-207ENST00000621999 LAMTOR4Q0VGL1 99 aa13.6□□□□□ -0.23
SCAMP1-207ENST00000621999 IQCB1Q15051 598 aa13.6□□□□□ -0.23
SCAMP1-207ENST00000621999 PTPN14Q15678 1187 aa13.6□□□□□ -0.23
SCAMP1-207ENST00000621999 ZNF720Q7Z2F6 126 aa13.6□□□□□ -0.23
SCAMP1-207ENST00000621999 CEP63Q96MT8 703 aa13.6□□□□□ -0.23
SCAMP1-207ENST00000621999 RPTORQ8N122 1335 aa13.6□□□□□ -0.23
SCAMP1-207ENST00000621999 SEMA3FQ13275 785 aa13.6□□□□□ -0.23
SCAMP1-207ENST00000621999 GLIS3Q8NEA6 775 aa13.6□□□□□ -0.23
SCAMP1-207ENST00000621999 ZNF296Q8WUU4 475 aaPredicted RBP13.6□□□□□ -0.23
SCAMP1-207ENST00000621999 MBOAT7Q96N66 472 aa13.6□□□□□ -0.23
SCAMP1-207ENST00000621999 C17orf75Q9HAS0 396 aa13.6□□□□□ -0.23
SCAMP1-207ENST00000621999 RBAKQ9NYW8 714 aaPredicted RBP13.6□□□□□ -0.23
SCAMP1-207ENST00000621999 GAS2O43903 313 aaKnown RBP13.6□□□□□ -0.23
SCAMP1-207ENST00000621999 KPNA6O60684 536 aa13.6□□□□□ -0.23
SCAMP1-207ENST00000621999 LRRN2O75325 713 aa13.6□□□□□ -0.23
SCAMP1-207ENST00000621999 TNFAIP3P21580 790 aa13.6□□□□□ -0.23
SCAMP1-207ENST00000621999 RNPEPQ9H4A4 650 aa13.6□□□□□ -0.23
SCAMP1-207ENST00000621999 FAM237AA0A1B0GTK4 181 aa13.59□□□□□ -0.23
SCAMP1-207ENST00000621999 PQBP1O60828 265 aaKnown RBP13.59□□□□□ -0.23
SCAMP1-207ENST00000621999 GJB1P08034 283 aa13.59□□□□□ -0.23
SCAMP1-207ENST00000621999 FGFR4P22455 802 aa13.59□□□□□ -0.23
SCAMP1-207ENST00000621999 SFMBT2Q5VUG0 894 aa13.59□□□□□ -0.23
SCAMP1-207ENST00000621999 OR8K1Q8NGG5 319 aa13.59□□□□□ -0.23
SCAMP1-207ENST00000621999 SCFD1Q8WVM8 642 aa13.59□□□□□ -0.23
SCAMP1-207ENST00000621999 ZBTB10Q96DT7 871 aa13.59□□□□□ -0.23
SCAMP1-207ENST00000621999 TEX33O43247 280 aa13.59□□□□□ -0.23
SCAMP1-207ENST00000621999 KIF5CO60282 957 aa13.59□□□□□ -0.23
SCAMP1-207ENST00000621999 ZNF862O60290 1169 aa13.59□□□□□ -0.23
SCAMP1-207ENST00000621999 CSPG5O95196 566 aa13.59□□□□□ -0.23
SCAMP1-207ENST00000621999 GPD1LQ8N335 351 aa13.59□□□□□ -0.23
SCAMP1-207ENST00000621999 KIAA0895Q8NCT3 520 aa13.59□□□□□ -0.23
SCAMP1-207ENST00000621999 PPTC7Q8NI37 304 aa13.59□□□□□ -0.23
SCAMP1-207ENST00000621999 NT5C1BQ96P26 610 aa13.59□□□□□ -0.23
SCAMP1-207ENST00000621999 BPIFA3Q9BQP9 254 aa13.59□□□□□ -0.23
SCAMP1-207ENST00000621999 SENP6Q9GZR1 1112 aaPredicted RBP13.59□□□□□ -0.23
SCAMP1-207ENST00000621999 MAF1Q9H063 256 aa13.59□□□□□ -0.23
SCAMP1-207ENST00000621999 ECM29Q5VYK3 1845 aa13.59□□□□□ -0.23
SCAMP1-207ENST00000621999 INHAP05111 366 aa13.59□□□□□ -0.23
SCAMP1-207ENST00000621999 NAMPTP43490 491 aa13.59□□□□□ -0.23
SCAMP1-207ENST00000621999 VAMP7P51809 220 aa13.59□□□□□ -0.23
SCAMP1-207ENST00000621999 CDC42EP1Q00587 391 aa13.59□□□□□ -0.23
SCAMP1-207ENST00000621999 ATF7IP2Q5U623 682 aa13.59□□□□□ -0.23
SCAMP1-207ENST00000621999 SH3RF1Q7Z6J0 888 aa13.59□□□□□ -0.23
SCAMP1-207ENST00000621999 CACTINQ8WUQ7 758 aaKnown RBP13.59□□□□□ -0.23
SCAMP1-207ENST00000621999 LZTFL1Q9NQ48 299 aa13.59□□□□□ -0.23
SCAMP1-207ENST00000621999 TOPORSQ9NS56 1045 aaPredicted RBP13.59□□□□□ -0.23
SCAMP1-207ENST00000621999 SNAI1O95863 264 aaPredicted RBP13.58□□□□□ -0.23
SCAMP1-207ENST00000621999 STAT1P42224 750 aa13.58□□□□□ -0.23
SCAMP1-207ENST00000621999 MNS1Q8NEH6 495 aa13.58□□□□□ -0.23
SCAMP1-207ENST00000621999 KIAA1586Q9HCI6 787 aa13.58□□□□□ -0.23
SCAMP1-207ENST00000621999 PRMT7Q9NVM4 692 aaPredicted RBP13.58□□□□□ -0.23
SCAMP1-207ENST00000621999 FRMPD4Q14CM0 1322 aa13.58□□□□□ -0.23
SCAMP1-207ENST00000621999 DHX15O43143 795 aaKnown RBP13.58□□□□□ -0.24
SCAMP1-207ENST00000621999 MMP3P08254 477 aa13.58□□□□□ -0.24
SCAMP1-207ENST00000621999 TM4SF4P48230 202 aa13.58□□□□□ -0.24
SCAMP1-207ENST00000621999 MDM2Q00987 491 aaPredicted RBP13.58□□□□□ -0.24
SCAMP1-207ENST00000621999 KCNA1Q09470 495 aa13.58□□□□□ -0.24
SCAMP1-207ENST00000621999 PLPPR4Q7Z2D5 763 aa13.58□□□□□ -0.24
SCAMP1-207ENST00000621999 MSL3Q8N5Y2 521 aaKnown RBP13.58□□□□□ -0.24
SCAMP1-207ENST00000621999 TTC16Q8NEE8 873 aa13.58□□□□□ -0.24
SCAMP1-207ENST00000621999 ATP11BQ9Y2G3 1177 aa13.58□□□□□ -0.24
SCAMP1-207ENST00000621999 CEP83Q9Y592 693 aa13.58□□□□□ -0.24
SCAMP1-207ENST00000621999 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.58□□□□□ -0.24
SCAMP1-207ENST00000621999 SYNGAP1Q96PV0 1343 aa13.58□□□□□ -0.24
SCAMP1-207ENST00000621999 SSC5DA1L4H1 1573 aa13.58□□□□□ -0.24
SCAMP1-207ENST00000621999 LOC102724159A0A0B4J2E5 919 aa13.58□□□□□ -0.24
SCAMP1-207ENST00000621999 XPOTO43592 962 aaKnown RBP13.58□□□□□ -0.24
SCAMP1-207ENST00000621999 MSCO60682 206 aa13.58□□□□□ -0.24
SCAMP1-207ENST00000621999 PWP2Q15269 919 aaKnown RBP13.58□□□□□ -0.24
SCAMP1-207ENST00000621999 IMPACTQ9P2X3 320 aa13.58□□□□□ -0.24
SCAMP1-207ENST00000621999 ZBBXA8MT70 800 aa13.58□□□□□ -0.24
SCAMP1-207ENST00000621999 SEPT4O43236 478 aa13.58□□□□□ -0.24
SCAMP1-207ENST00000621999 DUSP11O75319 330 aaKnown RBP13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms