RNA–Protein interactions for RNA: ENST00000621474.4

CBWD3-217, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 1,648 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-217ENST00000621474 KCNH3Q9ULD8 1083 aa15.83■□□□□ 0.13
CBWD3-217ENST00000621474 ODF2LQ9ULJ1 636 aa15.83■□□□□ 0.13
CBWD3-217ENST00000621474 FNDC1Q4ZHG4 1894 aaPredicted RBP15.83■□□□□ 0.12
CBWD3-217ENST00000621474 A0A1W2PQ27 194 aa15.83■□□□□ 0.12
CBWD3-217ENST00000621474 A0A1W2PQ64 194 aa15.83■□□□□ 0.12
CBWD3-217ENST00000621474 A0A1W2PQD8 194 aa15.83■□□□□ 0.12
CBWD3-217ENST00000621474 TTLL13PA6NNM8 815 aa15.83■□□□□ 0.12
CBWD3-217ENST00000621474 PEX3P56589 373 aa15.83■□□□□ 0.12
CBWD3-217ENST00000621474 PHOSPHO2Q8TCD6 241 aa15.83■□□□□ 0.12
CBWD3-217ENST00000621474 DDX12PQ92771 950 aa15.83■□□□□ 0.12
CBWD3-217ENST00000621474 STAMQ92783 540 aa15.83■□□□□ 0.12
CBWD3-217ENST00000621474 TOP1MTQ969P6 601 aa15.83■□□□□ 0.12
CBWD3-217ENST00000621474 FIZ1Q96SL8 496 aa15.83■□□□□ 0.12
CBWD3-217ENST00000621474 PBX4Q9BYU1 374 aa15.83■□□□□ 0.12
CBWD3-217ENST00000621474 C17orf75Q9HAS0 396 aa15.83■□□□□ 0.12
CBWD3-217ENST00000621474 RGS18Q9NS28 235 aa15.83■□□□□ 0.12
CBWD3-217ENST00000621474 AGPAT5Q9NUQ2 364 aa15.83■□□□□ 0.12
CBWD3-217ENST00000621474 FAM13BQ9NYF5 915 aa15.83■□□□□ 0.12
CBWD3-217ENST00000621474 ARHGAP28Q9P2N2 729 aa15.83■□□□□ 0.12
CBWD3-217ENST00000621474 HSFX4A0A1B0GTS1 333 aaPredicted RBP15.82■□□□□ 0.12
CBWD3-217ENST00000621474 HSFX3A0A1B0GWH4 333 aaPredicted RBP15.82■□□□□ 0.12
CBWD3-217ENST00000621474 C9IYK1 514 aa15.82■□□□□ 0.12
CBWD3-217ENST00000621474 INO80B-WBP1J3KQ70 363 aa15.82■□□□□ 0.12
CBWD3-217ENST00000621474 B4GALT5O43286 388 aa15.82■□□□□ 0.12
CBWD3-217ENST00000621474 ACTN4O43707 911 aaKnown RBP15.82■□□□□ 0.12
CBWD3-217ENST00000621474 TSPAN1O60635 241 aa15.82■□□□□ 0.12
CBWD3-217ENST00000621474 GJB5O95377 273 aa15.82■□□□□ 0.12
CBWD3-217ENST00000621474 PLS3P13797 630 aa15.82■□□□□ 0.12
CBWD3-217ENST00000621474 PBX2P40425 430 aa15.82■□□□□ 0.12
CBWD3-217ENST00000621474 KCNJ6P48051 423 aa15.82■□□□□ 0.12
CBWD3-217ENST00000621474 NDUFA8P51970 172 aa15.82■□□□□ 0.12
CBWD3-217ENST00000621474 RABGGTBP53611 331 aa15.82■□□□□ 0.12
CBWD3-217ENST00000621474 ODR4Q5SWX8 454 aa15.82■□□□□ 0.12
CBWD3-217ENST00000621474 SV2BQ7L1I2 683 aa15.82■□□□□ 0.12
CBWD3-217ENST00000621474 TAS1R3Q7RTX0 852 aa15.82■□□□□ 0.12
CBWD3-217ENST00000621474 CATSPER4Q7RTX7 472 aa15.82■□□□□ 0.12
CBWD3-217ENST00000621474 HERC6Q8IVU3 1022 aa15.82■□□□□ 0.12
CBWD3-217ENST00000621474 MYOCDQ8IZQ8 938 aa15.82■□□□□ 0.12
CBWD3-217ENST00000621474 IQUBQ8NA54 791 aa15.82■□□□□ 0.12
CBWD3-217ENST00000621474 LRCH3Q96II8 777 aa15.82■□□□□ 0.12
CBWD3-217ENST00000621474 NTPCRQ9BSD7 190 aaKnown RBP15.82■□□□□ 0.12
CBWD3-217ENST00000621474 FZD8Q9H461 694 aa15.82■□□□□ 0.12
CBWD3-217ENST00000621474 FXR1P51114 621 aaKnown RBP eCLIP15.81■□□□□ 0.12
CBWD3-217ENST00000621474 SMAD3P84022 425 aaKnown RBP15.81■□□□□ 0.12
CBWD3-217ENST00000621474 DMP1Q13316 513 aaPredicted RBP15.81■□□□□ 0.12
CBWD3-217ENST00000621474 PPP2R5AQ15172 486 aa15.81■□□□□ 0.12
CBWD3-217ENST00000621474 PPP4R3CPQ6ZMV5 832 aa15.81■□□□□ 0.12
CBWD3-217ENST00000621474 DYMQ7RTS9 669 aa15.81■□□□□ 0.12
CBWD3-217ENST00000621474 IFT74Q96LB3 600 aa15.81■□□□□ 0.12
CBWD3-217ENST00000621474 TNMDQ9H2S6 317 aa15.81■□□□□ 0.12
CBWD3-217ENST00000621474 CUEDC2Q9H467 287 aa15.81■□□□□ 0.12
CBWD3-217ENST00000621474 RC3H2Q9HBD1 1191 aaKnown RBP15.81■□□□□ 0.12
CBWD3-217ENST00000621474 PIN4Q9Y237 131 aaKnown RBP15.81■□□□□ 0.12
CBWD3-217ENST00000621474 FRMD3A2A2Y4 597 aa15.8■□□□□ 0.12
CBWD3-217ENST00000621474 AMHP03971 560 aa15.8■□□□□ 0.12
CBWD3-217ENST00000621474 MYOGP15173 224 aa15.8■□□□□ 0.12
CBWD3-217ENST00000621474 ATF7P17544 494 aaPredicted RBP15.8■□□□□ 0.12
CBWD3-217ENST00000621474 ARF4P18085 180 aaPredicted RBP15.8■□□□□ 0.12
CBWD3-217ENST00000621474 PCBP1Q15365 356 aaKnown RBP eCLIP15.8■□□□□ 0.12
CBWD3-217ENST00000621474 FAM187BQ17R55 369 aa15.8■□□□□ 0.12
CBWD3-217ENST00000621474 TPRNQ4KMQ1 711 aa15.8■□□□□ 0.12
CBWD3-217ENST00000621474 FAM43BQ6ZT52 329 aaPredicted RBP15.8■□□□□ 0.12
CBWD3-217ENST00000621474 SLC24A5Q71RS6 500 aa15.8■□□□□ 0.12
CBWD3-217ENST00000621474 SPIRE2Q8WWL2 714 aa15.8■□□□□ 0.12
CBWD3-217ENST00000621474 TRAIPQ9BWF2 469 aa15.8■□□□□ 0.12
CBWD3-217ENST00000621474 CHST12Q9NRB3 414 aa15.8■□□□□ 0.12
CBWD3-217ENST00000621474 USP20Q9Y2K6 914 aa15.8■□□□□ 0.12
CBWD3-217ENST00000621474 YBX2Q9Y2T7 364 aaKnown RBP15.8■□□□□ 0.12
CBWD3-217ENST00000621474 EYSQ5T1H1 3165 aa15.8■□□□□ 0.12
CBWD3-217ENST00000621474 DENND3A2RUS2 1198 aa15.79■□□□□ 0.12
CBWD3-217ENST00000621474 SLC16A4O15374 487 aa15.79■□□□□ 0.12
CBWD3-217ENST00000621474 ARHGEF15O94989 841 aa15.79■□□□□ 0.12
CBWD3-217ENST00000621474 SARSP49591 514 aaKnown RBP15.79■□□□□ 0.12
CBWD3-217ENST00000621474 NCKAP1LP55160 1127 aa15.79■□□□□ 0.12
CBWD3-217ENST00000621474 FAM189BP81408 668 aa15.79■□□□□ 0.12
CBWD3-217ENST00000621474 HTRA4P83105 476 aaPredicted RBP15.79■□□□□ 0.12
CBWD3-217ENST00000621474 LONRF3Q496Y0 759 aa15.79■□□□□ 0.12
CBWD3-217ENST00000621474 UBXN11Q5T124 520 aa15.79■□□□□ 0.12
CBWD3-217ENST00000621474 FAM117BQ6P1L5 589 aa15.79■□□□□ 0.12
CBWD3-217ENST00000621474 FSIP1Q8NA03 581 aa15.79■□□□□ 0.12
CBWD3-217ENST00000621474 TMEM87AQ8NBN3 555 aa15.79■□□□□ 0.12
CBWD3-217ENST00000621474 TMEM161BQ8NDZ6 487 aa15.79■□□□□ 0.12
CBWD3-217ENST00000621474 DEPTORQ8TB45 409 aa15.79■□□□□ 0.12
CBWD3-217ENST00000621474 MRPS27Q92552 414 aaKnown RBP15.79■□□□□ 0.12
CBWD3-217ENST00000621474 KCNN1Q92952 543 aa15.79■□□□□ 0.12
CBWD3-217ENST00000621474 CPB2Q96IY4 423 aa15.79■□□□□ 0.12
CBWD3-217ENST00000621474 PRIMPOLQ96LW4 560 aa15.79■□□□□ 0.12
CBWD3-217ENST00000621474 TRIM9Q9C026 710 aa15.79■□□□□ 0.12
CBWD3-217ENST00000621474 C2orf40Q9H1Z8 148 aa15.79■□□□□ 0.12
CBWD3-217ENST00000621474 PARVGQ9HBI0 331 aa15.79■□□□□ 0.12
CBWD3-217ENST00000621474 KMT5AQ9NQR1 393 aa15.79■□□□□ 0.12
CBWD3-217ENST00000621474 C1orf112Q9NSG2 853 aa15.79■□□□□ 0.12
CBWD3-217ENST00000621474 LARSQ9P2J5 1176 aaKnown RBP15.79■□□□□ 0.12
CBWD3-217ENST00000621474 SERTAD1Q9UHV2 236 aa15.79■□□□□ 0.12
CBWD3-217ENST00000621474 MYO9BQ13459 2157 aa15.79■□□□□ 0.12
CBWD3-217ENST00000621474 CNTNAP2Q9UHC6 1331 aa15.79■□□□□ 0.12
CBWD3-217ENST00000621474 KIAA1671Q9BY89 1806 aa15.79■□□□□ 0.12
CBWD3-217ENST00000621474 A0A0U1RQF3 1178 aa15.79■□□□□ 0.12
CBWD3-217ENST00000621474 LCHNA4D1U4 455 aa15.79■□□□□ 0.12
CBWD3-217ENST00000621474 CCDC169A6NNP5 214 aa15.79■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms