RNA–Protein interactions for RNA: ENST00000618972.4

NEB-220, Transcript of nebulin, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene NEB, Length 26,307 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEB-220ENST00000618972 RPS8P62241 208 aaKnown RBP3.28□□□□□ -1.88
NEB-220ENST00000618972 KCNV1Q6PIU1 500 aa3.28□□□□□ -1.88
NEB-220ENST00000618972 ESR2Q92731 530 aa3.28□□□□□ -1.88
NEB-220ENST00000618972 MIEF2Q96C03 454 aa3.28□□□□□ -1.88
NEB-220ENST00000618972 MMP19Q99542 508 aa3.28□□□□□ -1.88
NEB-220ENST00000618972 IFIH1Q9BYX4 1025 aaKnown RBP3.28□□□□□ -1.88
NEB-220ENST00000618972 AJAP1Q9UKB5 411 aaPredicted RBP3.28□□□□□ -1.88
NEB-220ENST00000618972 TRMT10CQ7L0Y3 403 aaKnown RBP3.28□□□□□ -1.88
NEB-220ENST00000618972 RASSF3Q86WH2 238 aa3.28□□□□□ -1.88
NEB-220ENST00000618972 CDKL2Q92772 493 aa3.28□□□□□ -1.88
NEB-220ENST00000618972 CUEDC2Q9H467 287 aa3.28□□□□□ -1.88
NEB-220ENST00000618972 EIF4ENIF1Q9NRA8 985 aaKnown RBP3.28□□□□□ -1.88
NEB-220ENST00000618972 ADAMTS1Q9UHI8 967 aa3.28□□□□□ -1.88
NEB-220ENST00000618972 SERPINA10Q9UK55 444 aa3.28□□□□□ -1.88
NEB-220ENST00000618972 PCDHA6Q9UN73 950 aa3.28□□□□□ -1.88
NEB-220ENST00000618972 PCDHA8Q9Y5H6 950 aa3.28□□□□□ -1.88
NEB-220ENST00000618972 ACADVLP49748 655 aa3.28□□□□□ -1.88
NEB-220ENST00000618972 HDLBPQ00341 1268 aaKnown RBP3.28□□□□□ -1.88
NEB-220ENST00000618972 TAB1Q15750 504 aa3.28□□□□□ -1.88
NEB-220ENST00000618972 MMEL1Q495T6 779 aa3.28□□□□□ -1.88
NEB-220ENST00000618972 CREG2Q8IUH2 290 aa3.28□□□□□ -1.88
NEB-220ENST00000618972 TUBGCP2Q9BSJ2 902 aa3.28□□□□□ -1.88
NEB-220ENST00000618972 TIMMDC1Q9NPL8 285 aa3.28□□□□□ -1.88
NEB-220ENST00000618972 PRDM11Q9NQV5 511 aa3.28□□□□□ -1.88
NEB-220ENST00000618972 MRPL42Q9Y6G3 142 aaKnown RBP3.28□□□□□ -1.88
NEB-220ENST00000618972 ZNF518AQ6AHZ1 1483 aa3.28□□□□□ -1.88
NEB-220ENST00000618972 A8MUI8 341 aa3.28□□□□□ -1.88
NEB-220ENST00000618972 USP17L15C9J2P7 530 aa3.28□□□□□ -1.88
NEB-220ENST00000618972 USP17L13C9JLJ4 530 aa3.28□□□□□ -1.88
NEB-220ENST00000618972 USP17L11C9JVI0 530 aa3.28□□□□□ -1.88
NEB-220ENST00000618972 USP17L18D6R9N7 530 aa3.28□□□□□ -1.88
NEB-220ENST00000618972 USP17L22D6RA61 530 aa3.28□□□□□ -1.88
NEB-220ENST00000618972 USP17L17D6RBQ6 530 aa3.28□□□□□ -1.88
NEB-220ENST00000618972 USP17L19D6RCP7 530 aa3.28□□□□□ -1.88
NEB-220ENST00000618972 USP17L20D6RJB6 530 aa3.28□□□□□ -1.88
NEB-220ENST00000618972 NDUFA10O95299 355 aa3.28□□□□□ -1.88
NEB-220ENST00000618972 USP17L24Q0WX57 530 aa3.28□□□□□ -1.88
NEB-220ENST00000618972 TCHHL1Q5QJ38 904 aaPredicted RBP3.28□□□□□ -1.88
NEB-220ENST00000618972 USP17L6PQ6QN14 398 aa3.28□□□□□ -1.88
NEB-220ENST00000618972 WARSP23381 471 aaKnown RBP3.28□□□□□ -1.88
NEB-220ENST00000618972 HOXA13P31271 388 aaPredicted RBP3.28□□□□□ -1.88
NEB-220ENST00000618972 RAB25P57735 213 aa3.28□□□□□ -1.88
NEB-220ENST00000618972 SH3RF1Q7Z6J0 888 aa3.28□□□□□ -1.88
NEB-220ENST00000618972 HORMAD1Q86X24 394 aa3.28□□□□□ -1.88
NEB-220ENST00000618972 CEP19Q96LK0 163 aa3.28□□□□□ -1.88
NEB-220ENST00000618972 LIMA1Q9UHB6 759 aaKnown RBP3.28□□□□□ -1.88
NEB-220ENST00000618972 DNM3Q9UQ16 869 aa3.28□□□□□ -1.88
NEB-220ENST00000618972 SH3BP1Q9Y3L3 701 aa3.28□□□□□ -1.88
NEB-220ENST00000618972 TCP11X1B4DZS4 312 aa3.28□□□□□ -1.88
NEB-220ENST00000618972 KCNK3O14649 394 aa3.28□□□□□ -1.88
NEB-220ENST00000618972 HERC4Q5GLZ8 1057 aaPredicted RBP3.28□□□□□ -1.88
NEB-220ENST00000618972 KRT39Q6A163 491 aa3.28□□□□□ -1.88
NEB-220ENST00000618972 LRRC34Q8IZ02 419 aa3.28□□□□□ -1.88
NEB-220ENST00000618972 PIAS4Q8N2W9 510 aaPredicted RBP3.28□□□□□ -1.88
NEB-220ENST00000618972 ANKRD42Q8N9B4 389 aa3.28□□□□□ -1.88
NEB-220ENST00000618972 C1orf131Q8NDD1 294 aaKnown RBP3.28□□□□□ -1.88
NEB-220ENST00000618972 TMIEQ8NEW7 156 aa3.28□□□□□ -1.88
NEB-220ENST00000618972 RFWD2Q8NHY2 731 aa3.28□□□□□ -1.88
NEB-220ENST00000618972 PNMA5Q96PV4 448 aa3.28□□□□□ -1.88
NEB-220ENST00000618972 SMAPO00193 183 aa3.28□□□□□ -1.88
NEB-220ENST00000618972 STAT1P42224 750 aa3.28□□□□□ -1.88
NEB-220ENST00000618972 STX5Q13190 355 aa3.28□□□□□ -1.88
NEB-220ENST00000618972 GRB10Q13322 594 aa3.28□□□□□ -1.88
NEB-220ENST00000618972 COG2Q14746 738 aa3.28□□□□□ -1.88
NEB-220ENST00000618972 HADHQ16836 314 aaKnown RBP3.28□□□□□ -1.88
NEB-220ENST00000618972 LRRC8EQ6NSJ5 796 aa3.28□□□□□ -1.88
NEB-220ENST00000618972 C4orf22Q6V702 233 aa3.28□□□□□ -1.88
NEB-220ENST00000618972 ARL10Q8N8L6 244 aa3.28□□□□□ -1.88
NEB-220ENST00000618972 PRCCQ92733 491 aaPredicted RBP3.28□□□□□ -1.88
NEB-220ENST00000618972 PRPF3O43395 683 aaKnown RBP3.28□□□□□ -1.88
NEB-220ENST00000618972 KATNA1O75449 491 aa3.28□□□□□ -1.88
NEB-220ENST00000618972 PBX1P40424 430 aa3.28□□□□□ -1.88
NEB-220ENST00000618972 ZNF746Q6NUN9 644 aaPredicted RBP3.28□□□□□ -1.88
NEB-220ENST00000618972 PDXDC2PQ6P474 469 aa3.28□□□□□ -1.88
NEB-220ENST00000618972 EPM2AIP1Q7L775 607 aaPredicted RBP3.28□□□□□ -1.88
NEB-220ENST00000618972 TTC13Q8NBP0 860 aa3.28□□□□□ -1.88
NEB-220ENST00000618972 IRGQQ8WZA9 623 aa3.28□□□□□ -1.88
NEB-220ENST00000618972 STX18Q9P2W9 335 aaKnown RBP3.28□□□□□ -1.88
NEB-220ENST00000618972 NIP7Q9Y221 180 aaKnown RBP eCLIP3.28□□□□□ -1.88
NEB-220ENST00000618972 A0A0B4J269 797 aa3.28□□□□□ -1.88
NEB-220ENST00000618972 CASP4P49662 377 aa3.28□□□□□ -1.88
NEB-220ENST00000618972 TUBB3Q13509 450 aa3.28□□□□□ -1.88
NEB-220ENST00000618972 DLK2Q6UY11 383 aa3.28□□□□□ -1.88
NEB-220ENST00000618972 TNIP2Q8NFZ5 429 aa3.28□□□□□ -1.88
NEB-220ENST00000618972 TRPC4APQ8TEL6 797 aa3.28□□□□□ -1.88
NEB-220ENST00000618972 PURBQ96QR8 312 aaKnown RBP3.28□□□□□ -1.88
NEB-220ENST00000618972 QPCTLQ9NXS2 382 aa3.28□□□□□ -1.88
NEB-220ENST00000618972 TELO2Q9Y4R8 837 aa3.28□□□□□ -1.88
NEB-220ENST00000618972 GOLGA4Q13439 2230 aaKnown RBP3.28□□□□□ -1.88
NEB-220ENST00000618972 ARHGEF12Q9NZN5 1544 aa3.28□□□□□ -1.88
NEB-220ENST00000618972 PDLIM1O00151 329 aa3.28□□□□□ -1.88
NEB-220ENST00000618972 CTNND1O60716 968 aaKnown RBP3.28□□□□□ -1.88
NEB-220ENST00000618972 EEF1GP26641 437 aaKnown RBP3.28□□□□□ -1.88
NEB-220ENST00000618972 CCNHP51946 323 aaPredicted RBP3.28□□□□□ -1.88
NEB-220ENST00000618972 PLTPP55058 493 aa3.28□□□□□ -1.88
NEB-220ENST00000618972 STRN3Q13033 797 aa3.28□□□□□ -1.88
NEB-220ENST00000618972 SFMBT2Q5VUG0 894 aa3.28□□□□□ -1.88
NEB-220ENST00000618972 LLGL2Q6P1M3 1020 aa3.28□□□□□ -1.88
NEB-220ENST00000618972 MINPP1Q9UNW1 487 aa3.28□□□□□ -1.88
NEB-220ENST00000618972 MAGOHP61326 146 aaKnown RBP3.28□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms