RNA–Protein interactions for RNA: ENST00000618856.1

NEK3-209, Transcript of NIMA related kinase 3, humanhuman

TSL 5

Gene NEK3, Length 544 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-209ENST00000618856 KCND2Q9NZV8 630 aa9.16□□□□□ -0.94
NEK3-209ENST00000618856 DAXXQ9UER7 740 aaPredicted RBP9.16□□□□□ -0.94
NEK3-209ENST00000618856 RALGAPA2Q2PPJ7 1873 aa9.15□□□□□ -0.94
NEK3-209ENST00000618856 DENND3A2RUS2 1198 aa9.15□□□□□ -0.94
NEK3-209ENST00000618856 TSPAN1O60635 241 aa9.15□□□□□ -0.94
NEK3-209ENST00000618856 PPP6R2O75170 966 aa9.15□□□□□ -0.94
NEK3-209ENST00000618856 UPP2O95045 317 aa9.15□□□□□ -0.94
NEK3-209ENST00000618856 YEATS4O95619 227 aa9.15□□□□□ -0.94
NEK3-209ENST00000618856 EOMESO95936 686 aa9.15□□□□□ -0.94
NEK3-209ENST00000618856 STAG3L1P0CL83 205 aa9.15□□□□□ -0.94
NEK3-209ENST00000618856 SRGAP2CP0DJJ0 459 aa9.15□□□□□ -0.94
NEK3-209ENST00000618856 ZSCAN20P17040 1043 aaPredicted RBP9.15□□□□□ -0.94
NEK3-209ENST00000618856 AXLP30530 894 aa9.15□□□□□ -0.94
NEK3-209ENST00000618856 NAMPTP43490 491 aa9.15□□□□□ -0.94
NEK3-209ENST00000618856 PHKA2P46019 1235 aa9.15□□□□□ -0.94
NEK3-209ENST00000618856 TFDP1Q14186 410 aa9.15□□□□□ -0.94
NEK3-209ENST00000618856 FAM117BQ6P1L5 589 aa9.15□□□□□ -0.94
NEK3-209ENST00000618856 USP49Q70CQ1 688 aa9.15□□□□□ -0.94
NEK3-209ENST00000618856 ECHDC2Q86YB7 292 aa9.15□□□□□ -0.94
NEK3-209ENST00000618856 KIFAP3Q92845 792 aa9.15□□□□□ -0.94
NEK3-209ENST00000618856 CCDC51Q96ER9 411 aa9.15□□□□□ -0.94
NEK3-209ENST00000618856 PRIMPOLQ96LW4 560 aa9.15□□□□□ -0.94
NEK3-209ENST00000618856 FAM161BQ96MY7 647 aa9.15□□□□□ -0.94
NEK3-209ENST00000618856 TGS1Q96RS0 853 aaKnown RBP9.15□□□□□ -0.94
NEK3-209ENST00000618856 YME1L1Q96TA2 773 aa9.15□□□□□ -0.94
NEK3-209ENST00000618856 RUSC1Q9BVN2 902 aa9.15□□□□□ -0.94
NEK3-209ENST00000618856 C17orf75Q9HAS0 396 aa9.15□□□□□ -0.94
NEK3-209ENST00000618856 BMP2KQ9NSY1 1161 aaPredicted RBP9.15□□□□□ -0.94
NEK3-209ENST00000618856 DACT1Q9NYF0 836 aa9.15□□□□□ -0.94
NEK3-209ENST00000618856 LMCD1Q9NZU5 365 aa9.15□□□□□ -0.94
NEK3-209ENST00000618856 FNDC1Q4ZHG4 1894 aaPredicted RBP9.15□□□□□ -0.95
NEK3-209ENST00000618856 A0A1B0GUA9 196 aa9.14□□□□□ -0.95
NEK3-209ENST00000618856 INPPL1O15357 1258 aa9.14□□□□□ -0.95
NEK3-209ENST00000618856 RB1P06400 928 aa9.14□□□□□ -0.95
NEK3-209ENST00000618856 PLA2G4BP0C869 781 aa9.14□□□□□ -0.95
NEK3-209ENST00000618856 SKIP12755 728 aa9.14□□□□□ -0.95
NEK3-209ENST00000618856 UBA7P41226 1012 aa9.14□□□□□ -0.95
NEK3-209ENST00000618856 EPC2Q52LR7 807 aa9.14□□□□□ -0.95
NEK3-209ENST00000618856 NAALADL2Q58DX5 795 aa9.14□□□□□ -0.95
NEK3-209ENST00000618856 AXDND1Q5T1B0 1012 aaPredicted RBP9.14□□□□□ -0.95
NEK3-209ENST00000618856 FAM102BQ5T8I3 360 aa9.14□□□□□ -0.95
NEK3-209ENST00000618856 CATSPER4Q7RTX7 472 aa9.14□□□□□ -0.95
NEK3-209ENST00000618856 FIBCD1Q8N539 461 aa9.14□□□□□ -0.95
NEK3-209ENST00000618856 KRI1Q8N9T8 703 aaKnown RBP9.14□□□□□ -0.95
NEK3-209ENST00000618856 SPIRE2Q8WWL2 714 aa9.14□□□□□ -0.95
NEK3-209ENST00000618856 MYLIPQ8WY64 445 aa9.14□□□□□ -0.95
NEK3-209ENST00000618856 EPSTI1Q96J88 318 aa9.14□□□□□ -0.95
NEK3-209ENST00000618856 CCDC43Q96MW1 224 aaKnown RBP9.14□□□□□ -0.95
NEK3-209ENST00000618856 ZNF396Q96N95 335 aaPredicted RBP9.14□□□□□ -0.95
NEK3-209ENST00000618856 CLIC6Q96NY7 704 aa9.14□□□□□ -0.95
NEK3-209ENST00000618856 CASD1Q96PB1 797 aa9.14□□□□□ -0.95
NEK3-209ENST00000618856 C17orf80Q9BSJ5 609 aa9.14□□□□□ -0.95
NEK3-209ENST00000618856 PRDM12Q9H4Q4 367 aa9.14□□□□□ -0.95
NEK3-209ENST00000618856 FAM105AQ9NUU6 356 aa9.14□□□□□ -0.95
NEK3-209ENST00000618856 ARHGAP28Q9P2N2 729 aa9.14□□□□□ -0.95
NEK3-209ENST00000618856 RCOR1Q9UKL0 485 aa9.14□□□□□ -0.95
NEK3-209ENST00000618856 PCDHB7Q9Y5E2 793 aa9.14□□□□□ -0.95
NEK3-209ENST00000618856 MRPL42Q9Y6G3 142 aaKnown RBP9.14□□□□□ -0.95
NEK3-209ENST00000618856 COL4A4P53420 1690 aaPredicted RBP9.13□□□□□ -0.95
NEK3-209ENST00000618856 CNTNAP2Q9UHC6 1331 aa9.13□□□□□ -0.95
NEK3-209ENST00000618856 H3BNC9 293 aa9.13□□□□□ -0.95
NEK3-209ENST00000618856 HAX1O00165 279 aa9.13□□□□□ -0.95
NEK3-209ENST00000618856 ACKR2O00590 384 aa9.13□□□□□ -0.95
NEK3-209ENST00000618856 SPTLC2O15270 562 aa9.13□□□□□ -0.95
NEK3-209ENST00000618856 HOXA2O43364 376 aa9.13□□□□□ -0.95
NEK3-209ENST00000618856 EDN1P05305 212 aa9.13□□□□□ -0.95
NEK3-209ENST00000618856 HSP90AA1P07900 732 aaKnown RBP9.13□□□□□ -0.95
NEK3-209ENST00000618856 ARF4P18085 180 aaPredicted RBP9.13□□□□□ -0.95
NEK3-209ENST00000618856 PLCG1P19174 1290 aa9.13□□□□□ -0.95
NEK3-209ENST00000618856 NCLP19338 710 aaKnown RBP9.13□□□□□ -0.95
NEK3-209ENST00000618856 MARCKSP29966 332 aaPredicted RBP9.13□□□□□ -0.95
NEK3-209ENST00000618856 BMPR1AP36894 532 aa9.13□□□□□ -0.95
NEK3-209ENST00000618856 GATMP50440 423 aa9.13□□□□□ -0.95
NEK3-209ENST00000618856 RAB27AP51159 221 aa9.13□□□□□ -0.95
NEK3-209ENST00000618856 ZNF131P52739 623 aa9.13□□□□□ -0.95
NEK3-209ENST00000618856 BTG3Q14201 252 aaPredicted RBP9.13□□□□□ -0.95
NEK3-209ENST00000618856 KARSQ15046 597 aaKnown RBP9.13□□□□□ -0.95
NEK3-209ENST00000618856 PPP2R5AQ15172 486 aa9.13□□□□□ -0.95
NEK3-209ENST00000618856 CLLU1OSQ5K130 101 aa9.13□□□□□ -0.95
NEK3-209ENST00000618856 LRRC55Q6ZSA7 311 aa9.13□□□□□ -0.95
NEK3-209ENST00000618856 MAEAQ7L5Y9 396 aa9.13□□□□□ -0.95
NEK3-209ENST00000618856 TMEM192Q8IY95 271 aa9.13□□□□□ -0.95
NEK3-209ENST00000618856 SMG8Q8ND04 991 aaKnown RBP9.13□□□□□ -0.95
NEK3-209ENST00000618856 ARNTL2Q8WYA1 636 aa9.13□□□□□ -0.95
NEK3-209ENST00000618856 RAD54LQ92698 747 aa9.13□□□□□ -0.95
NEK3-209ENST00000618856 SYMPKQ92797 1274 aaKnown RBP9.13□□□□□ -0.95
NEK3-209ENST00000618856 P2RX5Q93086 422 aa9.13□□□□□ -0.95
NEK3-209ENST00000618856 CALML4Q96GE6 196 aa9.13□□□□□ -0.95
NEK3-209ENST00000618856 SCLT1Q96NL6 688 aa9.13□□□□□ -0.95
NEK3-209ENST00000618856 PLVAPQ9BX97 442 aa9.13□□□□□ -0.95
NEK3-209ENST00000618856 TMEM117Q9H0C3 514 aa9.13□□□□□ -0.95
NEK3-209ENST00000618856 C2orf40Q9H1Z8 148 aa9.13□□□□□ -0.95
NEK3-209ENST00000618856 TMEM134Q9H6X4 195 aa9.13□□□□□ -0.95
NEK3-209ENST00000618856 CWH43Q9H720 699 aa9.13□□□□□ -0.95
NEK3-209ENST00000618856 PRMT7Q9NVM4 692 aaPredicted RBP9.13□□□□□ -0.95
NEK3-209ENST00000618856 TFIP11Q9UBB9 837 aaKnown RBP9.13□□□□□ -0.95
NEK3-209ENST00000618856 KCNG1Q9UIX4 513 aa9.13□□□□□ -0.95
NEK3-209ENST00000618856 PIN4Q9Y237 131 aaKnown RBP9.13□□□□□ -0.95
NEK3-209ENST00000618856 RWDD3Q9Y3V2 267 aa9.13□□□□□ -0.95
NEK3-209ENST00000618856 MTCH2Q9Y6C9 303 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms