RNA–Protein interactions for RNA: ENST00000617222.4

PCDHGC3-204, Transcript of protocadherin gamma subfamily C, 3, humanhuman

TSL 3 BASIC

Gene PCDHGC3, Length 731 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-204ENST00000617222 ADGRA3Q8IWK6 1321 aa17.22■□□□□ 0.35
PCDHGC3-204ENST00000617222 INO80B-WBP1J3KQ70 363 aa17.22■□□□□ 0.35
PCDHGC3-204ENST00000617222 NBNO60934 754 aa17.22■□□□□ 0.35
PCDHGC3-204ENST00000617222 RPS6KA5O75582 802 aa17.22■□□□□ 0.35
PCDHGC3-204ENST00000617222 CDCA2Q69YH5 1023 aaPredicted RBP17.22■□□□□ 0.35
PCDHGC3-204ENST00000617222 HAUS6Q7Z4H7 955 aa17.22■□□□□ 0.35
PCDHGC3-204ENST00000617222 DEFB128Q7Z7B8 93 aa17.22■□□□□ 0.35
PCDHGC3-204ENST00000617222 IFNLR1Q8IU57 520 aaPredicted RBP17.22■□□□□ 0.35
PCDHGC3-204ENST00000617222 TMEM199Q8N511 208 aa17.22■□□□□ 0.35
PCDHGC3-204ENST00000617222 TMEM161BQ8NDZ6 487 aa17.22■□□□□ 0.35
PCDHGC3-204ENST00000617222 SMARCE1Q969G3 411 aa17.22■□□□□ 0.35
PCDHGC3-204ENST00000617222 CCDC47Q96A33 483 aaKnown RBP17.22■□□□□ 0.35
PCDHGC3-204ENST00000617222 NFKBIZQ9BYH8 718 aa17.22■□□□□ 0.35
PCDHGC3-204ENST00000617222 C2orf40Q9H1Z8 148 aa17.22■□□□□ 0.35
PCDHGC3-204ENST00000617222 AGO3Q9H9G7 860 aaKnown RBP17.22■□□□□ 0.35
PCDHGC3-204ENST00000617222 EXOC1Q9NV70 894 aa17.22■□□□□ 0.35
PCDHGC3-204ENST00000617222 SQORQ9Y6N5 450 aa17.22■□□□□ 0.35
PCDHGC3-204ENST00000617222 DENND3A2RUS2 1198 aa17.21■□□□□ 0.35
PCDHGC3-204ENST00000617222 K7ENM7 598 aa17.21■□□□□ 0.35
PCDHGC3-204ENST00000617222 PARNO95453 639 aaKnown RBP17.21■□□□□ 0.35
PCDHGC3-204ENST00000617222 MAPTP10636 758 aaKnown RBP17.21■□□□□ 0.35
PCDHGC3-204ENST00000617222 CSF2RAP15509 400 aa17.21■□□□□ 0.35
PCDHGC3-204ENST00000617222 CD52P31358 61 aa17.21■□□□□ 0.35
PCDHGC3-204ENST00000617222 EFNA5P52803 228 aa17.21■□□□□ 0.35
PCDHGC3-204ENST00000617222 NCKAP1LP55160 1127 aa17.21■□□□□ 0.35
PCDHGC3-204ENST00000617222 MBTD1Q05BQ5 628 aa17.21■□□□□ 0.35
PCDHGC3-204ENST00000617222 EHHADHQ08426 723 aa17.21■□□□□ 0.35
PCDHGC3-204ENST00000617222 NFX1Q12986 1120 aaKnown RBP17.21■□□□□ 0.35
PCDHGC3-204ENST00000617222 FAM26FQ5R3K3 315 aa17.21■□□□□ 0.35
PCDHGC3-204ENST00000617222 TSHZ1Q6ZSZ6 1077 aa17.21■□□□□ 0.35
PCDHGC3-204ENST00000617222 ZNF720Q7Z2F6 126 aa17.21■□□□□ 0.35
PCDHGC3-204ENST00000617222 FAM228AQ86W67 206 aa17.21■□□□□ 0.35
PCDHGC3-204ENST00000617222 USP38Q8NB14 1042 aa17.21■□□□□ 0.35
PCDHGC3-204ENST00000617222 FGFBP2Q9BYJ0 223 aa17.21■□□□□ 0.35
PCDHGC3-204ENST00000617222 TMEM134Q9H6X4 195 aa17.21■□□□□ 0.35
PCDHGC3-204ENST00000617222 SLC39A2Q9NP94 309 aa17.21■□□□□ 0.35
PCDHGC3-204ENST00000617222 OLFML3Q9NRN5 406 aa17.21■□□□□ 0.35
PCDHGC3-204ENST00000617222 ARHGAP28Q9P2N2 729 aa17.21■□□□□ 0.35
PCDHGC3-204ENST00000617222 ALPK3Q96L96 1907 aa17.2■□□□□ 0.34
PCDHGC3-204ENST00000617222 H0YCG3 227 aa17.2■□□□□ 0.34
PCDHGC3-204ENST00000617222 K7ERI5 159 aa17.2■□□□□ 0.34
PCDHGC3-204ENST00000617222 GCNT3O95395 438 aa17.2■□□□□ 0.34
PCDHGC3-204ENST00000617222 SFPQP23246 707 aaKnown RBP eCLIP17.2■□□□□ 0.34
PCDHGC3-204ENST00000617222 RFC2P35250 354 aa17.2■□□□□ 0.34
PCDHGC3-204ENST00000617222 SARSP49591 514 aaKnown RBP17.2■□□□□ 0.34
PCDHGC3-204ENST00000617222 KCNB1Q14721 858 aa17.2■□□□□ 0.34
PCDHGC3-204ENST00000617222 ZC2HC1CQ53FD0 456 aaPredicted RBP17.2■□□□□ 0.34
PCDHGC3-204ENST00000617222 CATSPER4Q7RTX7 472 aa17.2■□□□□ 0.34
PCDHGC3-204ENST00000617222 SLC17A8Q8NDX2 589 aa17.2■□□□□ 0.34
PCDHGC3-204ENST00000617222 SPATA20Q8TB22 786 aa17.2■□□□□ 0.34
PCDHGC3-204ENST00000617222 GSDMAQ96QA5 445 aa17.2■□□□□ 0.34
PCDHGC3-204ENST00000617222 LBHD1Q9BQE6 289 aaPredicted RBP17.2■□□□□ 0.34
PCDHGC3-204ENST00000617222 FZD8Q9H461 694 aa17.2■□□□□ 0.34
PCDHGC3-204ENST00000617222 PADI3Q9ULW8 664 aa17.2■□□□□ 0.34
PCDHGC3-204ENST00000617222 ST3GAL5Q9UNP4 418 aa17.2■□□□□ 0.34
PCDHGC3-204ENST00000617222 GPR182O15218 404 aa17.19■□□□□ 0.34
PCDHGC3-204ENST00000617222 RHOBTB3O94955 611 aa17.19■□□□□ 0.34
PCDHGC3-204ENST00000617222 CXCL10P02778 98 aa17.19■□□□□ 0.34
PCDHGC3-204ENST00000617222 PRKCBP05771 671 aa17.19■□□□□ 0.34
PCDHGC3-204ENST00000617222 MYBP10242 640 aa17.19■□□□□ 0.34
PCDHGC3-204ENST00000617222 CASP5P51878 434 aa17.19■□□□□ 0.34
PCDHGC3-204ENST00000617222 STK4Q13043 487 aa17.19■□□□□ 0.34
PCDHGC3-204ENST00000617222 PAK2Q13177 524 aa17.19■□□□□ 0.34
PCDHGC3-204ENST00000617222 PSMD2Q13200 908 aa17.19■□□□□ 0.34
PCDHGC3-204ENST00000617222 MAPK6Q16659 721 aa17.19■□□□□ 0.34
PCDHGC3-204ENST00000617222 KLHL40Q2TBA0 621 aa17.19■□□□□ 0.34
PCDHGC3-204ENST00000617222 SKOR2Q2VWA4 1001 aaPredicted RBP17.19■□□□□ 0.34
PCDHGC3-204ENST00000617222 ISM2Q6H9L7 571 aa17.19■□□□□ 0.34
PCDHGC3-204ENST00000617222 TAS1R3Q7RTX0 852 aa17.19■□□□□ 0.34
PCDHGC3-204ENST00000617222 RPUSD2Q8IZ73 545 aaKnown RBP17.19■□□□□ 0.34
PCDHGC3-204ENST00000617222 GLIS3Q8NEA6 775 aa17.19■□□□□ 0.34
PCDHGC3-204ENST00000617222 DBF4BQ8NFT6 615 aa17.19■□□□□ 0.34
PCDHGC3-204ENST00000617222 SEPT8Q92599 483 aa17.19■□□□□ 0.34
PCDHGC3-204ENST00000617222 CCDC113Q9H0I3 377 aa17.19■□□□□ 0.34
PCDHGC3-204ENST00000617222 ST6GALNAC4Q9H4F1 302 aa17.19■□□□□ 0.34
PCDHGC3-204ENST00000617222 ERVK-5Q9HDB9 667 aa17.19■□□□□ 0.34
PCDHGC3-204ENST00000617222 RMND1Q9NWS8 449 aa17.19■□□□□ 0.34
PCDHGC3-204ENST00000617222 KIAA1468Q9P260 1216 aa17.19■□□□□ 0.34
PCDHGC3-204ENST00000617222 MAN1B1Q9UKM7 699 aa17.19■□□□□ 0.34
PCDHGC3-204ENST00000617222 USP20Q9Y2K6 914 aa17.19■□□□□ 0.34
PCDHGC3-204ENST00000617222 PCDHB13Q9Y5F0 798 aa17.19■□□□□ 0.34
PCDHGC3-204ENST00000617222 BIN1O00499 593 aa17.18■□□□□ 0.34
PCDHGC3-204ENST00000617222 ACKR2O00590 384 aa17.18■□□□□ 0.34
PCDHGC3-204ENST00000617222 ERLIN2O94905 339 aa17.18■□□□□ 0.34
PCDHGC3-204ENST00000617222 PRPF6O94906 941 aaKnown RBP17.18■□□□□ 0.34
PCDHGC3-204ENST00000617222 ACRP10323 421 aa17.18■□□□□ 0.34
PCDHGC3-204ENST00000617222 GTF2BQ00403 316 aa17.18■□□□□ 0.34
PCDHGC3-204ENST00000617222 FPGSQ05932 587 aa17.18■□□□□ 0.34
PCDHGC3-204ENST00000617222 STRN3Q13033 797 aa17.18■□□□□ 0.34
PCDHGC3-204ENST00000617222 PPIGQ13427 754 aaKnown RBP eCLIP17.18■□□□□ 0.34
PCDHGC3-204ENST00000617222 PLEKHG4Q58EX7 1191 aa17.18■□□□□ 0.34
PCDHGC3-204ENST00000617222 CCDC183Q5T5S1 534 aa17.18■□□□□ 0.34
PCDHGC3-204ENST00000617222 NT5DC1Q5TFE4 455 aa17.18■□□□□ 0.34
PCDHGC3-204ENST00000617222 CAVIN1Q6NZI2 390 aaKnown RBP17.18■□□□□ 0.34
PCDHGC3-204ENST00000617222 VWCEQ96DN2 955 aa17.18■□□□□ 0.34
PCDHGC3-204ENST00000617222 STRA6Q9BX79 667 aa17.18■□□□□ 0.34
PCDHGC3-204ENST00000617222 IFIH1Q9BYX4 1025 aaKnown RBP17.18■□□□□ 0.34
PCDHGC3-204ENST00000617222 IL23AQ9NPF7 189 aa17.18■□□□□ 0.34
PCDHGC3-204ENST00000617222 PRMT7Q9NVM4 692 aaPredicted RBP17.18■□□□□ 0.34
PCDHGC3-204ENST00000617222 TMEM63CQ9P1W3 806 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms