RNA–Protein interactions for RNA: ENST00000616939.4

GPN1-212, Transcript of GPN-loop GTPase 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene GPN1, Length 1,832 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN1-212ENST00000616939 ZBTB5O15062 677 aa16.79■□□□□ 0.28
GPN1-212ENST00000616939 LUC7L3O95232 432 aaKnown RBP16.79■□□□□ 0.28
GPN1-212ENST00000616939 POTEIP0CG38 1075 aa16.79■□□□□ 0.28
GPN1-212ENST00000616939 POTEJP0CG39 1038 aa16.79■□□□□ 0.28
GPN1-212ENST00000616939 TNFAIP3P21580 790 aa16.79■□□□□ 0.28
GPN1-212ENST00000616939 IBSPP21815 317 aaPredicted RBP16.79■□□□□ 0.28
GPN1-212ENST00000616939 PSMC2P35998 433 aaKnown RBP16.79■□□□□ 0.28
GPN1-212ENST00000616939 RHBDL3P58872 404 aa16.79■□□□□ 0.28
GPN1-212ENST00000616939 KCNJ2P63252 427 aa16.79■□□□□ 0.28
GPN1-212ENST00000616939 DRAP1Q14919 205 aaPredicted RBP16.79■□□□□ 0.28
GPN1-212ENST00000616939 C11orf91Q3C1V1 193 aa16.79■□□□□ 0.28
GPN1-212ENST00000616939 GJB7Q6PEY0 223 aa16.79■□□□□ 0.28
GPN1-212ENST00000616939 POTEEQ6S8J3 1075 aa16.79■□□□□ 0.28
GPN1-212ENST00000616939 EXOC3L1Q86VI1 746 aa16.79■□□□□ 0.28
GPN1-212ENST00000616939 SLF2Q8IX21 1173 aa16.79■□□□□ 0.28
GPN1-212ENST00000616939 CKAP2Q8WWK9 683 aa16.79■□□□□ 0.28
GPN1-212ENST00000616939 SLCO2A1Q92959 643 aa16.79■□□□□ 0.28
GPN1-212ENST00000616939 GPR88Q9GZN0 384 aa16.79■□□□□ 0.28
GPN1-212ENST00000616939 PSTPIP2Q9H939 334 aa16.79■□□□□ 0.28
GPN1-212ENST00000616939 RXFP1Q9HBX9 757 aa16.79■□□□□ 0.28
GPN1-212ENST00000616939 DNAJC12Q9UKB3 198 aa16.79■□□□□ 0.28
GPN1-212ENST00000616939 PASKQ96RG2 1323 aa16.79■□□□□ 0.28
GPN1-212ENST00000616939 CNTNAP4Q9C0A0 1308 aa16.79■□□□□ 0.28
GPN1-212ENST00000616939 QSER1Q2KHR3 1735 aa16.78■□□□□ 0.28
GPN1-212ENST00000616939 TTLL1O95922 423 aa16.78■□□□□ 0.28
GPN1-212ENST00000616939 KRT13P13646 458 aa16.78■□□□□ 0.28
GPN1-212ENST00000616939 CCNB1P14635 433 aa16.78■□□□□ 0.28
GPN1-212ENST00000616939 TM4SF1P30408 202 aa16.78■□□□□ 0.28
GPN1-212ENST00000616939 RFC4P35249 363 aa16.78■□□□□ 0.28
GPN1-212ENST00000616939 FMO5P49326 533 aa16.78■□□□□ 0.28
GPN1-212ENST00000616939 CASP4P49662 377 aa16.78■□□□□ 0.28
GPN1-212ENST00000616939 LACTBP83111 547 aaPredicted RBP16.78■□□□□ 0.28
GPN1-212ENST00000616939 GABPAQ06546 454 aa16.78■□□□□ 0.28
GPN1-212ENST00000616939 AP3B2Q13367 1082 aa16.78■□□□□ 0.28
GPN1-212ENST00000616939 ACVR2BQ13705 512 aa16.78■□□□□ 0.28
GPN1-212ENST00000616939 CMPK2Q5EBM0 449 aa16.78■□□□□ 0.28
GPN1-212ENST00000616939 SEL1L2Q5TEA6 688 aa16.78■□□□□ 0.28
GPN1-212ENST00000616939 TBC1D9BQ66K14 1250 aa16.78■□□□□ 0.28
GPN1-212ENST00000616939 RNF43Q68DV7 783 aa16.78■□□□□ 0.28
GPN1-212ENST00000616939 POTEGQ6S5H5 508 aa16.78■□□□□ 0.28
GPN1-212ENST00000616939 FAM186BQ8IYM0 893 aa16.78■□□□□ 0.28
GPN1-212ENST00000616939 ETNPPLQ8TBG4 499 aa16.78■□□□□ 0.28
GPN1-212ENST00000616939 FAM212AQ96EL1 285 aa16.78■□□□□ 0.28
GPN1-212ENST00000616939 ZNF570Q96NI8 536 aa16.78■□□□□ 0.28
GPN1-212ENST00000616939 MTFR1LQ9H019 292 aa16.78■□□□□ 0.28
GPN1-212ENST00000616939 ZHX3Q9H4I2 956 aa16.78■□□□□ 0.28
GPN1-212ENST00000616939 CORO1CQ9ULV4 474 aaPredicted RBP16.78■□□□□ 0.28
GPN1-212ENST00000616939 ZMYM2Q9UBW7 1377 aa16.78■□□□□ 0.28
GPN1-212ENST00000616939 TCEA3O75764 348 aa16.77■□□□□ 0.28
GPN1-212ENST00000616939 SMNDC1O75940 238 aaKnown RBP eCLIP16.77■□□□□ 0.28
GPN1-212ENST00000616939 PPP2R5AQ15172 486 aa16.77■□□□□ 0.28
GPN1-212ENST00000616939 Q4G0T1 1027 aa16.77■□□□□ 0.28
GPN1-212ENST00000616939 SPATA21Q7Z572 469 aa16.77■□□□□ 0.28
GPN1-212ENST00000616939 CATSPER3Q86XQ3 398 aa16.77■□□□□ 0.28
GPN1-212ENST00000616939 CRYGNQ8WXF5 182 aa16.77■□□□□ 0.28
GPN1-212ENST00000616939 GJA10Q969M2 543 aa16.77■□□□□ 0.28
GPN1-212ENST00000616939 GRAMD1AQ96CP6 724 aa16.77■□□□□ 0.28
GPN1-212ENST00000616939 KLHL29Q96CT2 875 aa16.77■□□□□ 0.28
GPN1-212ENST00000616939 C18orf8Q96DM3 657 aa16.77■□□□□ 0.28
GPN1-212ENST00000616939 ANO3Q9BYT9 981 aa16.77■□□□□ 0.28
GPN1-212ENST00000616939 WNT8AQ9H1J5 351 aa16.77■□□□□ 0.28
GPN1-212ENST00000616939 GPCPD1Q9NPB8 672 aa16.77■□□□□ 0.28
GPN1-212ENST00000616939 WHRNQ9P202 907 aa16.77■□□□□ 0.28
GPN1-212ENST00000616939 ALG6Q9Y672 507 aa16.77■□□□□ 0.28
GPN1-212ENST00000616939 TBCAO75347 108 aaKnown RBP16.77■□□□□ 0.27
GPN1-212ENST00000616939 SPATA31C1P0DKV0 1188 aa16.77■□□□□ 0.27
GPN1-212ENST00000616939 PDE6BP35913 854 aa16.77■□□□□ 0.27
GPN1-212ENST00000616939 COILP38432 576 aaPredicted RBP16.77■□□□□ 0.27
GPN1-212ENST00000616939 ZNF211Q13398 564 aaPredicted RBP16.77■□□□□ 0.27
GPN1-212ENST00000616939 TTC27Q6P3X3 843 aa16.77■□□□□ 0.27
GPN1-212ENST00000616939 THOC1Q96FV9 657 aaKnown RBP16.77■□□□□ 0.27
GPN1-212ENST00000616939 POLR3CQ9BUI4 534 aaPredicted RBP16.77■□□□□ 0.27
GPN1-212ENST00000616939 TRIM7Q9C029 511 aa16.77■□□□□ 0.27
GPN1-212ENST00000616939 INTS2Q9H0H0 1204 aaKnown RBP16.77■□□□□ 0.27
GPN1-212ENST00000616939 USP40Q9NVE5 1235 aa16.77■□□□□ 0.27
GPN1-212ENST00000616939 MTUS1Q9ULD2 1270 aa16.77■□□□□ 0.27
GPN1-212ENST00000616939 COG5Q9UP83 839 aa16.77■□□□□ 0.27
GPN1-212ENST00000616939 L3MBTL1Q9Y468 752 aa16.77■□□□□ 0.27
GPN1-212ENST00000616939 TGFB1I1O43294 461 aa16.76■□□□□ 0.27
GPN1-212ENST00000616939 EYA4O95677 639 aa16.76■□□□□ 0.27
GPN1-212ENST00000616939 COPB2P35606 906 aa16.76■□□□□ 0.27
GPN1-212ENST00000616939 MSH2P43246 934 aa16.76■□□□□ 0.27
GPN1-212ENST00000616939 PEX5P50542 639 aa16.76■□□□□ 0.27
GPN1-212ENST00000616939 BLMHQ13867 455 aa16.76■□□□□ 0.27
GPN1-212ENST00000616939 CCDC137Q6PK04 289 aaKnown RBP16.76■□□□□ 0.27
GPN1-212ENST00000616939 VSTM1Q6UX27 236 aa16.76■□□□□ 0.27
GPN1-212ENST00000616939 APLFQ8IW19 511 aaPredicted RBP16.76■□□□□ 0.27
GPN1-212ENST00000616939 LRRC47Q8N1G4 583 aaKnown RBP16.76■□□□□ 0.27
GPN1-212ENST00000616939 ARMC2Q8NEN0 867 aa16.76■□□□□ 0.27
GPN1-212ENST00000616939 RAB3IPQ96QF0 476 aaPredicted RBP16.76■□□□□ 0.27
GPN1-212ENST00000616939 AGPAT1Q99943 283 aa16.76■□□□□ 0.27
GPN1-212ENST00000616939 THAP2Q9H0W7 228 aa16.76■□□□□ 0.27
GPN1-212ENST00000616939 APEX2Q9UBZ4 518 aa16.76■□□□□ 0.27
GPN1-212ENST00000616939 THRAP3Q9Y2W1 955 aaKnown RBP16.76■□□□□ 0.27
GPN1-212ENST00000616939 RBBP6Q7Z6E9 1792 aaKnown RBP16.76■□□□□ 0.27
GPN1-212ENST00000616939 TAF1LQ8IZX4 1826 aa16.76■□□□□ 0.27
GPN1-212ENST00000616939 TCP11X1B4DZS4 312 aa16.75■□□□□ 0.27
GPN1-212ENST00000616939 E7ENQ6 273 aa16.75■□□□□ 0.27
GPN1-212ENST00000616939 ABCB4P21439 1286 aa16.75■□□□□ 0.27
GPN1-212ENST00000616939 FGFR4P22455 802 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms