RNA–Protein interactions for RNA: ENST00000616692.1

NOP56-220, Transcript of NOP56 ribonucleoprotein, humanhuman

TSL 1 (best)

Gene NOP56, Length 2,662 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOP56-220ENST00000616692 DCAF15Q66K64 600 aa16.51■□□□□ 0.23
NOP56-220ENST00000616692 PPP4R3AQ6IN85 833 aa16.51■□□□□ 0.23
NOP56-220ENST00000616692 ATP8B4Q8TF62 1192 aa16.51■□□□□ 0.23
NOP56-220ENST00000616692 ZDHHC15Q96MV8 337 aa16.51■□□□□ 0.23
NOP56-220ENST00000616692 CEP44Q9C0F1 390 aa16.51■□□□□ 0.23
NOP56-220ENST00000616692 B3GNT4Q9C0J1 378 aa16.51■□□□□ 0.23
NOP56-220ENST00000616692 TMOD2Q9NZR1 351 aa16.51■□□□□ 0.23
NOP56-220ENST00000616692 CCL15-CCL14A0A0B4J2E2 113 aa16.51■□□□□ 0.23
NOP56-220ENST00000616692 KCNJ13O60928 360 aa16.51■□□□□ 0.23
NOP56-220ENST00000616692 NR1D1P20393 614 aa16.51■□□□□ 0.23
NOP56-220ENST00000616692 ZBTB17Q13105 803 aa16.51■□□□□ 0.23
NOP56-220ENST00000616692 PPIL2Q13356 520 aa16.51■□□□□ 0.23
NOP56-220ENST00000616692 CCL15Q16663 113 aa16.51■□□□□ 0.23
NOP56-220ENST00000616692 IQCEQ6IPM2 695 aa16.51■□□□□ 0.23
NOP56-220ENST00000616692 HHIPL2Q6UWX4 724 aa16.51■□□□□ 0.23
NOP56-220ENST00000616692 CHCHD4Q8N4Q1 142 aa16.51■□□□□ 0.23
NOP56-220ENST00000616692 ANKRD49Q8WVL7 239 aa16.51■□□□□ 0.23
NOP56-220ENST00000616692 PRCCQ92733 491 aaPredicted RBP16.51■□□□□ 0.23
NOP56-220ENST00000616692 SATB2Q9UPW6 733 aa16.51■□□□□ 0.23
NOP56-220ENST00000616692 CYP2C9P11712 490 aa16.5■□□□□ 0.23
NOP56-220ENST00000616692 PRKACBP22694 351 aa16.5■□□□□ 0.23
NOP56-220ENST00000616692 ALDH5A1P51649 535 aaPredicted RBP16.5■□□□□ 0.23
NOP56-220ENST00000616692 POLR2FP61218 127 aaKnown RBP16.5■□□□□ 0.23
NOP56-220ENST00000616692 SPIDRQ14159 915 aa16.5■□□□□ 0.23
NOP56-220ENST00000616692 TAF1CQ15572 869 aaPredicted RBP16.5■□□□□ 0.23
NOP56-220ENST00000616692 TRIM71Q2Q1W2 868 aaKnown RBP16.5■□□□□ 0.23
NOP56-220ENST00000616692 CAVIN4Q5BKX8 364 aa16.5■□□□□ 0.23
NOP56-220ENST00000616692 CCNI2Q6ZMN8 369 aaPredicted RBP16.5■□□□□ 0.23
NOP56-220ENST00000616692 FBF1Q8TES7 1133 aa16.5■□□□□ 0.23
NOP56-220ENST00000616692 AENQ8WTP8 325 aaKnown RBP16.5■□□□□ 0.23
NOP56-220ENST00000616692 FAIMQ9NVQ4 179 aa16.5■□□□□ 0.23
NOP56-220ENST00000616692 PALD1Q9ULE6 856 aa16.5■□□□□ 0.23
NOP56-220ENST00000616692 PCDHAC2Q9Y5I4 1007 aa16.5■□□□□ 0.23
NOP56-220ENST00000616692 CCT8L1PA6NM43 557 aa16.5■□□□□ 0.23
NOP56-220ENST00000616692 ASMTLO95671 621 aa16.5■□□□□ 0.23
NOP56-220ENST00000616692 GNAZP19086 355 aa16.5■□□□□ 0.23
NOP56-220ENST00000616692 GPC3P51654 580 aa16.5■□□□□ 0.23
NOP56-220ENST00000616692 VGLL4Q14135 290 aa16.5■□□□□ 0.23
NOP56-220ENST00000616692 ANKDD1AQ495B1 522 aa16.5■□□□□ 0.23
NOP56-220ENST00000616692 C4orf46Q504U0 113 aa16.5■□□□□ 0.23
NOP56-220ENST00000616692 TMEM151BQ8IW70 566 aa16.5■□□□□ 0.23
NOP56-220ENST00000616692 GSPT2Q8IYD1 628 aaKnown RBP16.5■□□□□ 0.23
NOP56-220ENST00000616692 LSMEM2Q8N112 164 aa16.5■□□□□ 0.23
NOP56-220ENST00000616692 CYP4X1Q8N118 509 aa16.5■□□□□ 0.23
NOP56-220ENST00000616692 TNIP2Q8NFZ5 429 aa16.5■□□□□ 0.23
NOP56-220ENST00000616692 ERP27Q96DN0 273 aa16.5■□□□□ 0.23
NOP56-220ENST00000616692 IER2Q9BTL4 223 aa16.5■□□□□ 0.23
NOP56-220ENST00000616692 TDRD3Q9H7E2 651 aaKnown RBP16.5■□□□□ 0.23
NOP56-220ENST00000616692 TRPC7Q9HCX4 862 aa16.5■□□□□ 0.23
NOP56-220ENST00000616692 GIT1Q9Y2X7 761 aa16.5■□□□□ 0.23
NOP56-220ENST00000616692 B4GALT4O60513 344 aa16.49■□□□□ 0.23
NOP56-220ENST00000616692 POLR2EP19388 210 aaKnown RBP16.49■□□□□ 0.23
NOP56-220ENST00000616692 ACADVLP49748 655 aa16.49■□□□□ 0.23
NOP56-220ENST00000616692 SNAPC2Q13487 334 aa16.49■□□□□ 0.23
NOP56-220ENST00000616692 QPCTQ16769 361 aa16.49■□□□□ 0.23
NOP56-220ENST00000616692 LLGL2Q6P1M3 1020 aa16.49■□□□□ 0.23
NOP56-220ENST00000616692 FAM136AQ96C01 138 aa16.49■□□□□ 0.23
NOP56-220ENST00000616692 ASIC4Q96FT7 647 aa16.49■□□□□ 0.23
NOP56-220ENST00000616692 PPANQ9NQ55 473 aaKnown RBP16.49■□□□□ 0.23
NOP56-220ENST00000616692 ADAM22Q9P0K1 906 aa16.49■□□□□ 0.23
NOP56-220ENST00000616692 SCHIP1Q9P0W5 487 aaPredicted RBP16.49■□□□□ 0.23
NOP56-220ENST00000616692 GABBR1Q9UBS5 961 aa16.49■□□□□ 0.23
NOP56-220ENST00000616692 SAP30BPQ9UHR5 308 aaKnown RBP16.49■□□□□ 0.23
NOP56-220ENST00000616692 ZNF536O15090 1300 aa16.49■□□□□ 0.23
NOP56-220ENST00000616692 SNAP23O00161 211 aa16.49■□□□□ 0.23
NOP56-220ENST00000616692 STX10O60499 249 aa16.49■□□□□ 0.23
NOP56-220ENST00000616692 HIP1RO75146 1068 aa16.49■□□□□ 0.23
NOP56-220ENST00000616692 WFS1O76024 890 aa16.49■□□□□ 0.23
NOP56-220ENST00000616692 TFRCP02786 760 aaKnown RBP16.49■□□□□ 0.23
NOP56-220ENST00000616692 BNIP1Q12981 228 aa16.49■□□□□ 0.23
NOP56-220ENST00000616692 PCSK7Q16549 785 aa16.49■□□□□ 0.23
NOP56-220ENST00000616692 TWF2Q6IBS0 349 aaKnown RBP16.49■□□□□ 0.23
NOP56-220ENST00000616692 FAM133AQ8N9E0 248 aa16.49■□□□□ 0.23
NOP56-220ENST00000616692 BRF1Q92994 677 aa16.49■□□□□ 0.23
NOP56-220ENST00000616692 NSMCE3Q96MG7 304 aa16.49■□□□□ 0.23
NOP56-220ENST00000616692 MAP3K14Q99558 947 aa16.49■□□□□ 0.23
NOP56-220ENST00000616692 HGH1Q9BTY7 390 aa16.49■□□□□ 0.23
NOP56-220ENST00000616692 CCSER1Q9C0I3 900 aa16.49■□□□□ 0.23
NOP56-220ENST00000616692 NOSIPQ9Y314 301 aaKnown RBP16.49■□□□□ 0.23
NOP56-220ENST00000616692 AOX1Q06278 1338 aa16.48■□□□□ 0.23
NOP56-220ENST00000616692 A0A0B4J203 849 aa16.48■□□□□ 0.23
NOP56-220ENST00000616692 MAGEA13PA6NCF6 341 aa16.48■□□□□ 0.23
NOP56-220ENST00000616692 TLR2O60603 784 aa16.48■□□□□ 0.23
NOP56-220ENST00000616692 GLULP15104 373 aa16.48■□□□□ 0.23
NOP56-220ENST00000616692 CACNA2D1P54289 1103 aa16.48■□□□□ 0.23
NOP56-220ENST00000616692 ATP11AP98196 1134 aa16.48■□□□□ 0.23
NOP56-220ENST00000616692 PPATQ06203 517 aa16.48■□□□□ 0.23
NOP56-220ENST00000616692 ARL13BQ3SXY8 428 aa16.48■□□□□ 0.23
NOP56-220ENST00000616692 GLE1Q53GS7 698 aaKnown RBP16.48■□□□□ 0.23
NOP56-220ENST00000616692 PPP2R2DQ66LE6 453 aa16.48■□□□□ 0.23
NOP56-220ENST00000616692 FIP1L1Q6UN15 594 aaKnown RBP16.48■□□□□ 0.23
NOP56-220ENST00000616692 CCNJLQ8IV13 435 aa16.48■□□□□ 0.23
NOP56-220ENST00000616692 DIS3LQ8TF46 1054 aaKnown RBP16.48■□□□□ 0.23
NOP56-220ENST00000616692 ZNF594Q96JF6 807 aaPredicted RBP16.48■□□□□ 0.23
NOP56-220ENST00000616692 MRPL44Q9H9J2 332 aaKnown RBP16.48■□□□□ 0.23
NOP56-220ENST00000616692 FZD1Q9UP38 647 aa16.48■□□□□ 0.23
NOP56-220ENST00000616692 TTLL13PA6NNM8 815 aa16.48■□□□□ 0.23
NOP56-220ENST00000616692 HSF2BPO75031 334 aa16.48■□□□□ 0.23
NOP56-220ENST00000616692 TMED10P49755 219 aaKnown RBP16.48■□□□□ 0.23
NOP56-220ENST00000616692 F6X3S4 739 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms