RNA–Protein interactions for RNA: ENST00000616550.4

CBWD3-212, Transcript of COBW domain containing 3, humanhuman

TSL 2 BASIC

Gene CBWD3, Length 721 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-212ENST00000616550 ECM1Q16610 540 aa24.6■■□□□ 1.53
CBWD3-212ENST00000616550 KLHL23Q8NBE8 558 aa24.6■■□□□ 1.53
CBWD3-212ENST00000616550 HLA-CQ95604 372 aa24.6■■□□□ 1.53
CBWD3-212ENST00000616550 ALG13Q9NP73 1137 aaKnown RBP24.6■■□□□ 1.53
CBWD3-212ENST00000616550 GPRC5CQ9NQ84 441 aa24.6■■□□□ 1.53
CBWD3-212ENST00000616550 DDX19AQ9NUU7 478 aaKnown RBP24.6■■□□□ 1.53
CBWD3-212ENST00000616550 ATF7P17544 494 aaPredicted RBP24.59■■□□□ 1.53
CBWD3-212ENST00000616550 CYP11B2P19099 503 aa24.59■■□□□ 1.53
CBWD3-212ENST00000616550 AAK1Q2M2I8 961 aa24.59■■□□□ 1.53
CBWD3-212ENST00000616550 TJAP1Q5JTD0 557 aa24.59■■□□□ 1.53
CBWD3-212ENST00000616550 ARL6IP4Q66PJ3 421 aaKnown RBP24.59■■□□□ 1.53
CBWD3-212ENST00000616550 IFNLR1Q8IU57 520 aaPredicted RBP24.59■■□□□ 1.53
CBWD3-212ENST00000616550 NFKBIZQ9BYH8 718 aa24.59■■□□□ 1.53
CBWD3-212ENST00000616550 BHMT2Q9H2M3 363 aa24.59■■□□□ 1.53
CBWD3-212ENST00000616550 NSUN3Q9H649 340 aaKnown RBP24.59■■□□□ 1.53
CBWD3-212ENST00000616550 DNM3Q9UQ16 869 aa24.59■■□□□ 1.53
CBWD3-212ENST00000616550 PP2D1A8MPX8 630 aa24.58■■□□□ 1.53
CBWD3-212ENST00000616550 ZNF623O75123 536 aa24.58■■□□□ 1.53
CBWD3-212ENST00000616550 ITGB1P05556 798 aa24.58■■□□□ 1.53
CBWD3-212ENST00000616550 LAG3P18627 525 aa24.58■■□□□ 1.53
CBWD3-212ENST00000616550 CDC25AP30304 524 aa24.58■■□□□ 1.53
CBWD3-212ENST00000616550 AXLP30530 894 aa24.58■■□□□ 1.53
CBWD3-212ENST00000616550 HOXA11P31270 313 aaPredicted RBP24.58■■□□□ 1.53
CBWD3-212ENST00000616550 CSPP1Q1MSJ5 1256 aa24.58■■□□□ 1.53
CBWD3-212ENST00000616550 CLLU1OSQ5K130 101 aa24.58■■□□□ 1.53
CBWD3-212ENST00000616550 LRRC43Q8N309 656 aa24.58■■□□□ 1.53
CBWD3-212ENST00000616550 HELQQ8TDG4 1101 aa24.58■■□□□ 1.53
CBWD3-212ENST00000616550 SYMPKQ92797 1274 aaKnown RBP24.58■■□□□ 1.53
CBWD3-212ENST00000616550 PGBD4Q96DM1 585 aa24.58■■□□□ 1.53
CBWD3-212ENST00000616550 ASB2Q96Q27 587 aa24.58■■□□□ 1.53
CBWD3-212ENST00000616550 CWH43Q9H720 699 aa24.58■■□□□ 1.53
CBWD3-212ENST00000616550 PCDHB2Q9Y5E7 798 aa24.58■■□□□ 1.53
CBWD3-212ENST00000616550 MYO7AQ13402 2215 aa24.58■■□□□ 1.52
CBWD3-212ENST00000616550 VWA3AA6NCI4 1184 aa24.57■■□□□ 1.52
CBWD3-212ENST00000616550 LRRIQ4A6NIV6 560 aa24.57■■□□□ 1.52
CBWD3-212ENST00000616550 BMP15O95972 392 aa24.57■■□□□ 1.52
CBWD3-212ENST00000616550 LRRC55Q6ZSA7 311 aa24.57■■□□□ 1.52
CBWD3-212ENST00000616550 COLGALT1Q8NBJ5 622 aa24.57■■□□□ 1.52
CBWD3-212ENST00000616550 SPPL3Q8TCT6 385 aa24.57■■□□□ 1.52
CBWD3-212ENST00000616550 RSPH1Q8WYR4 309 aa24.57■■□□□ 1.52
CBWD3-212ENST00000616550 SNX21Q969T3 373 aa24.57■■□□□ 1.52
CBWD3-212ENST00000616550 MRPL9Q9BYD2 267 aaKnown RBP24.57■■□□□ 1.52
CBWD3-212ENST00000616550 FOXD4L1Q9NU39 408 aa24.57■■□□□ 1.52
CBWD3-212ENST00000616550 HCSTQ9UBK5 93 aa24.57■■□□□ 1.52
CBWD3-212ENST00000616550 UNC80Q8N2C7 3258 aa24.57■■□□□ 1.52
CBWD3-212ENST00000616550 SYT1P21579 422 aa24.56■■□□□ 1.52
CBWD3-212ENST00000616550 TFF2Q03403 129 aa24.56■■□□□ 1.52
CBWD3-212ENST00000616550 MBTD1Q05BQ5 628 aa24.56■■□□□ 1.52
CBWD3-212ENST00000616550 ZRSR1Q15695 479 aaKnown RBP24.56■■□□□ 1.52
CBWD3-212ENST00000616550 LONRF3Q496Y0 759 aa24.56■■□□□ 1.52
CBWD3-212ENST00000616550 NOTUMQ6P988 496 aa24.56■■□□□ 1.52
CBWD3-212ENST00000616550 GLB1LQ6UWU2 654 aa24.56■■□□□ 1.52
CBWD3-212ENST00000616550 THNSL1Q8IYQ7 743 aa24.56■■□□□ 1.52
CBWD3-212ENST00000616550 LPPQ93052 612 aa24.56■■□□□ 1.52
CBWD3-212ENST00000616550 TSPAN1O60635 241 aa24.55■■□□□ 1.52
CBWD3-212ENST00000616550 CSPG5O95196 566 aa24.55■■□□□ 1.52
CBWD3-212ENST00000616550 EYA4O95677 639 aa24.55■■□□□ 1.52
CBWD3-212ENST00000616550 TCEAL5Q5H9L2 206 aa24.55■■□□□ 1.52
CBWD3-212ENST00000616550 POF1BQ8WVV4 589 aa24.55■■□□□ 1.52
CBWD3-212ENST00000616550 MMTAG2Q9BU76 263 aaKnown RBP24.55■■□□□ 1.52
CBWD3-212ENST00000616550 COL25A1Q9BXS0 654 aaPredicted RBP24.55■■□□□ 1.52
CBWD3-212ENST00000616550 E9PMD0 336 aa24.54■■□□□ 1.52
CBWD3-212ENST00000616550 FGF18O76093 207 aa24.54■■□□□ 1.52
CBWD3-212ENST00000616550 UBE3AQ05086 875 aa24.54■■□□□ 1.52
CBWD3-212ENST00000616550 PPP2R5AQ15172 486 aa24.54■■□□□ 1.52
CBWD3-212ENST00000616550 MRPL10Q7Z7H8 261 aaKnown RBP24.54■■□□□ 1.52
CBWD3-212ENST00000616550 ZBTB8OSQ8IWT0 167 aa24.54■■□□□ 1.52
CBWD3-212ENST00000616550 CNNM3Q8NE01 707 aa24.54■■□□□ 1.52
CBWD3-212ENST00000616550 CCDC51Q96ER9 411 aa24.54■■□□□ 1.52
CBWD3-212ENST00000616550 CPB2Q96IY4 423 aa24.54■■□□□ 1.52
CBWD3-212ENST00000616550 ZNF558Q96NG5 402 aa24.54■■□□□ 1.52
CBWD3-212ENST00000616550 NT5C3AQ9H0P0 336 aa24.54■■□□□ 1.52
CBWD3-212ENST00000616550 C2orf40Q9H1Z8 148 aa24.54■■□□□ 1.52
CBWD3-212ENST00000616550 PLXNA4Q9HCM2 1894 aa24.53■■□□□ 1.52
CBWD3-212ENST00000616550 DNAJB1P25685 340 aa24.53■■□□□ 1.52
CBWD3-212ENST00000616550 CAMK1Q14012 370 aa24.53■■□□□ 1.52
CBWD3-212ENST00000616550 SF3A1Q15459 793 aaKnown RBP24.53■■□□□ 1.52
CBWD3-212ENST00000616550 NOMO2Q5JPE7 1267 aa24.53■■□□□ 1.52
CBWD3-212ENST00000616550 UBXN11Q5T124 520 aa24.53■■□□□ 1.52
CBWD3-212ENST00000616550 KCNT2Q6UVM3 1135 aa24.53■■□□□ 1.52
CBWD3-212ENST00000616550 HSCBQ8IWL3 235 aa24.53■■□□□ 1.52
CBWD3-212ENST00000616550 KCTD17Q8N5Z5 321 aa24.53■■□□□ 1.52
CBWD3-212ENST00000616550 KIFAP3Q92845 792 aa24.53■■□□□ 1.52
CBWD3-212ENST00000616550 CDK5RAP3Q96JB5 506 aa24.53■■□□□ 1.52
CBWD3-212ENST00000616550 IFT74Q96LB3 600 aa24.53■■□□□ 1.52
CBWD3-212ENST00000616550 AK8Q96MA6 479 aa24.53■■□□□ 1.52
CBWD3-212ENST00000616550 CSRNP2Q9H175 543 aa24.53■■□□□ 1.52
CBWD3-212ENST00000616550 INPP5FQ9Y2H2 1132 aa24.53■■□□□ 1.52
CBWD3-212ENST00000616550 ATG2AQ2TAZ0 1938 aa24.53■■□□□ 1.52
CBWD3-212ENST00000616550 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP24.52■■□□□ 1.52
CBWD3-212ENST00000616550 MEIS3P2A8K0S8 358 aa24.52■■□□□ 1.52
CBWD3-212ENST00000616550 NCK2O43639 380 aa24.52■■□□□ 1.52
CBWD3-212ENST00000616550 OFD1O75665 1012 aa24.52■■□□□ 1.52
CBWD3-212ENST00000616550 ARF4P18085 180 aaPredicted RBP24.52■■□□□ 1.52
CBWD3-212ENST00000616550 NCLP19338 710 aaKnown RBP24.52■■□□□ 1.52
CBWD3-212ENST00000616550 PPM1AP35813 382 aa24.52■■□□□ 1.52
CBWD3-212ENST00000616550 NAMPTP43490 491 aa24.52■■□□□ 1.52
CBWD3-212ENST00000616550 AMHR2Q16671 573 aa24.52■■□□□ 1.52
CBWD3-212ENST00000616550 HYIQ5T013 277 aa24.52■■□□□ 1.52
CBWD3-212ENST00000616550 CDCA2Q69YH5 1023 aaPredicted RBP24.52■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms