RNA–Protein interactions for RNA: ENST00000616053.4

TCF4-248, Transcript of transcription factor 4, humanhuman

TSL 5 BASIC

Gene TCF4, Length 8,140 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-248ENST00000616053 CLDN3O15551 220 aa13.42□□□□□ -0.26
TCF4-248ENST00000616053 NUDT14O95848 222 aa13.42□□□□□ -0.26
TCF4-248ENST00000616053 EZH2Q15910 746 aaKnown RBP13.42□□□□□ -0.26
TCF4-248ENST00000616053 HIST2H2ACQ16777 129 aaPredicted RBP13.42□□□□□ -0.26
TCF4-248ENST00000616053 HIST2H2AA3Q6FI13 130 aa13.42□□□□□ -0.26
TCF4-248ENST00000616053 MOSPD2Q8NHP6 518 aa13.42□□□□□ -0.26
TCF4-248ENST00000616053 USP17L8P0C7I0 530 aa13.41□□□□□ -0.26
TCF4-248ENST00000616053 SYDE2Q5VT97 1194 aa13.41□□□□□ -0.26
TCF4-248ENST00000616053 GPKOWQ92917 476 aaPredicted RBP eCLIP13.41□□□□□ -0.26
TCF4-248ENST00000616053 XPO6Q96QU8 1125 aaKnown RBP13.41□□□□□ -0.26
TCF4-248ENST00000616053 GINM1Q9NU53 330 aa13.41□□□□□ -0.26
TCF4-248ENST00000616053 CES1P23141 567 aa13.41□□□□□ -0.26
TCF4-248ENST00000616053 GRAMD1BQ3KR37 738 aa13.41□□□□□ -0.26
TCF4-248ENST00000616053 GRAMD4Q6IC98 578 aa13.41□□□□□ -0.26
TCF4-248ENST00000616053 DGKHQ86XP1 1220 aa13.41□□□□□ -0.26
TCF4-248ENST00000616053 MAP3K5Q99683 1374 aa13.41□□□□□ -0.26
TCF4-248ENST00000616053 KPNA7A9QM74 516 aa13.41□□□□□ -0.26
TCF4-248ENST00000616053 TLR2O60603 784 aa13.41□□□□□ -0.26
TCF4-248ENST00000616053 STARD3Q14849 445 aa13.41□□□□□ -0.26
TCF4-248ENST00000616053 MGAT5BQ3V5L5 792 aa13.41□□□□□ -0.26
TCF4-248ENST00000616053 EFHC2Q5JST6 749 aa13.41□□□□□ -0.26
TCF4-248ENST00000616053 C10orf76Q5T2E6 689 aa13.41□□□□□ -0.26
TCF4-248ENST00000616053 CHAMP1Q96JM3 812 aa13.41□□□□□ -0.26
TCF4-248ENST00000616053 INTUQ9ULD6 942 aa13.41□□□□□ -0.26
TCF4-248ENST00000616053 MEFVO15553 781 aaPredicted RBP13.41□□□□□ -0.26
TCF4-248ENST00000616053 RPN1P04843 607 aaKnown RBP13.41□□□□□ -0.26
TCF4-248ENST00000616053 CLUP10909 449 aa13.41□□□□□ -0.26
TCF4-248ENST00000616053 ADORA2BP29275 332 aa13.41□□□□□ -0.26
TCF4-248ENST00000616053 BMP2KLQ5H9B9 411 aa13.41□□□□□ -0.26
TCF4-248ENST00000616053 FAM26FQ5R3K3 315 aa13.41□□□□□ -0.26
TCF4-248ENST00000616053 CRLF3Q8IUI8 442 aa13.41□□□□□ -0.26
TCF4-248ENST00000616053 CSGALNACT1Q8TDX6 532 aa13.41□□□□□ -0.26
TCF4-248ENST00000616053 PNKPQ96T60 521 aa13.41□□□□□ -0.26
TCF4-248ENST00000616053 MAD2L2Q9UI95 211 aa13.41□□□□□ -0.26
TCF4-248ENST00000616053 RNF103-CHMP3A0A140T963 221 aa13.41□□□□□ -0.26
TCF4-248ENST00000616053 APOA1P02647 267 aa13.41□□□□□ -0.26
TCF4-248ENST00000616053 RPN2P04844 631 aa13.41□□□□□ -0.26
TCF4-248ENST00000616053 CAMK1Q14012 370 aa13.41□□□□□ -0.26
TCF4-248ENST00000616053 KCNB1Q14721 858 aa13.41□□□□□ -0.26
TCF4-248ENST00000616053 ZNF699Q32M78 642 aa13.41□□□□□ -0.26
TCF4-248ENST00000616053 TNNI3KQ59H18 835 aa13.41□□□□□ -0.26
TCF4-248ENST00000616053 LRRC8BQ6P9F7 803 aa13.41□□□□□ -0.26
TCF4-248ENST00000616053 TMC4Q7Z404 712 aa13.41□□□□□ -0.26
TCF4-248ENST00000616053 WDR75Q8IWA0 830 aaKnown RBP13.41□□□□□ -0.26
TCF4-248ENST00000616053 PYROXD1Q8WU10 500 aa13.41□□□□□ -0.26
TCF4-248ENST00000616053 CAPSLQ8WWF8 208 aa13.41□□□□□ -0.26
TCF4-248ENST00000616053 THTPAQ9BU02 230 aa13.41□□□□□ -0.26
TCF4-248ENST00000616053 KANSL2Q9H9L4 492 aa13.41□□□□□ -0.26
TCF4-248ENST00000616053 GGT7Q9UJ14 662 aa13.41□□□□□ -0.26
TCF4-248ENST00000616053 MKL2Q9ULH7 1088 aa13.41□□□□□ -0.26
TCF4-248ENST00000616053 LZTS1Q9Y250 596 aa13.41□□□□□ -0.26
TCF4-248ENST00000616053 FHOD1Q9Y613 1164 aa13.41□□□□□ -0.26
TCF4-248ENST00000616053 GFAPP14136 432 aa13.41□□□□□ -0.26
TCF4-248ENST00000616053 GCKRQ14397 625 aa13.41□□□□□ -0.26
TCF4-248ENST00000616053 USPL1Q5W0Q7 1092 aa13.41□□□□□ -0.26
TCF4-248ENST00000616053 ZNF790Q6PG37 636 aa13.41□□□□□ -0.26
TCF4-248ENST00000616053 KDELC2Q7Z4H8 507 aa13.41□□□□□ -0.26
TCF4-248ENST00000616053 DENND6AQ8IWF6 608 aa13.41□□□□□ -0.26
TCF4-248ENST00000616053 TTC17Q96AE7 1141 aa13.41□□□□□ -0.26
TCF4-248ENST00000616053 ZNF496Q96IT1 587 aaPredicted RBP13.41□□□□□ -0.26
TCF4-248ENST00000616053 UBE2TQ9NPD8 197 aaPredicted RBP13.41□□□□□ -0.26
TCF4-248ENST00000616053 GID8Q9NWU2 228 aa13.41□□□□□ -0.26
TCF4-248ENST00000616053 KIZQ2M2Z5 673 aa13.4□□□□□ -0.26
TCF4-248ENST00000616053 AHI1Q8N157 1196 aa13.4□□□□□ -0.26
TCF4-248ENST00000616053 SPATA33Q96N06 139 aa13.4□□□□□ -0.26
TCF4-248ENST00000616053 ATP11BQ9Y2G3 1177 aa13.4□□□□□ -0.26
TCF4-248ENST00000616053 ZNF804BA4D1E1 1349 aa13.4□□□□□ -0.26
TCF4-248ENST00000616053 PHLPP2Q6ZVD8 1323 aa13.4□□□□□ -0.26
TCF4-248ENST00000616053 LDHAP00338 332 aaKnown RBP13.4□□□□□ -0.26
TCF4-248ENST00000616053 PLS3P13797 630 aa13.4□□□□□ -0.26
TCF4-248ENST00000616053 METTL22Q9BUU2 404 aaPredicted RBP13.4□□□□□ -0.26
TCF4-248ENST00000616053 LSG1Q9H089 658 aaKnown RBP13.4□□□□□ -0.26
TCF4-248ENST00000616053 IGFLR1Q9H665 355 aa13.4□□□□□ -0.26
TCF4-248ENST00000616053 MPOP05164 745 aa13.4□□□□□ -0.26
TCF4-248ENST00000616053 COBLL1Q53SF7 1204 aa13.4□□□□□ -0.26
TCF4-248ENST00000616053 FAM160B2Q86V87 743 aa13.4□□□□□ -0.26
TCF4-248ENST00000616053 S100A13Q99584 98 aa13.4□□□□□ -0.26
TCF4-248ENST00000616053 KATNAL1Q9BW62 490 aa13.4□□□□□ -0.26
TCF4-248ENST00000616053 DIABLOQ9NR28 239 aa13.4□□□□□ -0.26
TCF4-248ENST00000616053 RGS2P41220 211 aa13.4□□□□□ -0.26
TCF4-248ENST00000616053 ASPRV1Q53RT3 343 aa13.4□□□□□ -0.26
TCF4-248ENST00000616053 VPS50Q96JG6 964 aa13.4□□□□□ -0.26
TCF4-248ENST00000616053 DDX28Q9NUL7 540 aaKnown RBP13.4□□□□□ -0.26
TCF4-248ENST00000616053 MPP6Q9NZW5 540 aa13.4□□□□□ -0.26
TCF4-248ENST00000616053 HDAC6Q9UBN7 1215 aa13.4□□□□□ -0.26
TCF4-248ENST00000616053 TBK1Q9UHD2 729 aa13.4□□□□□ -0.26
TCF4-248ENST00000616053 CYTH3O43739 400 aa13.4□□□□□ -0.26
TCF4-248ENST00000616053 CTSWP56202 376 aa13.4□□□□□ -0.26
TCF4-248ENST00000616053 MTFR1Q15390 333 aa13.4□□□□□ -0.26
TCF4-248ENST00000616053 ZBED8Q8IZ13 594 aa13.4□□□□□ -0.26
TCF4-248ENST00000616053 HIPK4Q8NE63 616 aa13.4□□□□□ -0.26
TCF4-248ENST00000616053 TMEM169Q96HH4 297 aa13.4□□□□□ -0.26
TCF4-248ENST00000616053 SLAIN2Q9P270 581 aa13.4□□□□□ -0.26
TCF4-248ENST00000616053 TRIM33Q9UPN9 1127 aa13.4□□□□□ -0.26
TCF4-248ENST00000616053 SLC30A1Q9Y6M5 507 aa13.4□□□□□ -0.26
TCF4-248ENST00000616053 KCNJ18B7U540 433 aa13.4□□□□□ -0.26
TCF4-248ENST00000616053 GRK3P35626 688 aa13.4□□□□□ -0.26
TCF4-248ENST00000616053 FANCCQ00597 558 aa13.4□□□□□ -0.26
TCF4-248ENST00000616053 CDC16Q13042 620 aa13.4□□□□□ -0.26
TCF4-248ENST00000616053 KCNJ12Q14500 433 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms