RNA–Protein interactions for RNA: ENST00000612195.4

TVP23A-210, Transcript of trans-golgi network vesicle protein 23 homolog A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TVP23A, Length 1,298 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23A-210ENST00000612195 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP18.78■□□□□ 0.6
TVP23A-210ENST00000612195 C2CD4DB7Z1M9 353 aa18.78■□□□□ 0.6
TVP23A-210ENST00000612195 EML1O00423 815 aa18.78■□□□□ 0.6
TVP23A-210ENST00000612195 CPLX1O14810 134 aa18.78■□□□□ 0.6
TVP23A-210ENST00000612195 GALTP07902 379 aa18.78■□□□□ 0.6
TVP23A-210ENST00000612195 SKIP12755 728 aa18.78■□□□□ 0.6
TVP23A-210ENST00000612195 NOMO2Q5JPE7 1267 aa18.78■□□□□ 0.6
TVP23A-210ENST00000612195 RARS2Q5T160 578 aaKnown RBP18.78■□□□□ 0.6
TVP23A-210ENST00000612195 PLA2G4FQ68DD2 849 aa18.78■□□□□ 0.6
TVP23A-210ENST00000612195 MOXD1Q6UVY6 613 aa18.78■□□□□ 0.6
TVP23A-210ENST00000612195 CATSPER4Q7RTX7 472 aa18.78■□□□□ 0.6
TVP23A-210ENST00000612195 TMEM87AQ8NBN3 555 aa18.78■□□□□ 0.6
TVP23A-210ENST00000612195 DAGLBQ8NCG7 672 aa18.78■□□□□ 0.6
TVP23A-210ENST00000612195 BCL7CQ8WUZ0 217 aaPredicted RBP18.78■□□□□ 0.6
TVP23A-210ENST00000612195 IGSF21Q96ID5 467 aa18.78■□□□□ 0.6
TVP23A-210ENST00000612195 RIPOR3Q96MK2 946 aa18.78■□□□□ 0.6
TVP23A-210ENST00000612195 NLRP4Q96MN2 994 aa18.78■□□□□ 0.6
TVP23A-210ENST00000612195 FAM105AQ9NUU6 356 aa18.78■□□□□ 0.6
TVP23A-210ENST00000612195 DDX25Q9UHL0 483 aaKnown RBP18.78■□□□□ 0.6
TVP23A-210ENST00000612195 VPS13AQ96RL7 3174 aa18.77■□□□□ 0.6
TVP23A-210ENST00000612195 SLC37A4O43826 429 aa18.77■□□□□ 0.6
TVP23A-210ENST00000612195 ZNF623O75123 536 aa18.77■□□□□ 0.6
TVP23A-210ENST00000612195 OFD1O75665 1012 aa18.77■□□□□ 0.6
TVP23A-210ENST00000612195 CTSAP10619 480 aa18.77■□□□□ 0.6
TVP23A-210ENST00000612195 EPCAMP16422 314 aa18.77■□□□□ 0.6
TVP23A-210ENST00000612195 MTHFRP42898 656 aa18.77■□□□□ 0.6
TVP23A-210ENST00000612195 POLGP54098 1239 aaPredicted RBP18.77■□□□□ 0.6
TVP23A-210ENST00000612195 PSMC5P62195 406 aa18.77■□□□□ 0.6
TVP23A-210ENST00000612195 NONOQ15233 471 aaKnown RBP eCLIP18.77■□□□□ 0.6
TVP23A-210ENST00000612195 INF2Q27J81 1249 aa18.77■□□□□ 0.6
TVP23A-210ENST00000612195 GALNT17Q6IS24 598 aa18.77■□□□□ 0.6
TVP23A-210ENST00000612195 DDX53Q86TM3 631 aaKnown RBP18.77■□□□□ 0.6
TVP23A-210ENST00000612195 RSPH1Q8WYR4 309 aa18.77■□□□□ 0.6
TVP23A-210ENST00000612195 ZNF274Q96GC6 653 aaPredicted RBP18.77■□□□□ 0.6
TVP23A-210ENST00000612195 GBP3Q9H0R5 595 aa18.77■□□□□ 0.6
TVP23A-210ENST00000612195 IFT122Q9HBG6 1241 aa18.77■□□□□ 0.6
TVP23A-210ENST00000612195 DNAJB4Q9UDY4 337 aa18.77■□□□□ 0.6
TVP23A-210ENST00000612195 IRAK3Q9Y616 596 aa18.77■□□□□ 0.6
TVP23A-210ENST00000612195 CYP46A1Q9Y6A2 500 aa18.77■□□□□ 0.6
TVP23A-210ENST00000612195 MYO15AQ9UKN7 3530 aa18.77■□□□□ 0.6
TVP23A-210ENST00000612195 BRD1O95696 1058 aa18.76■□□□□ 0.59
TVP23A-210ENST00000612195 SLC11A1P49279 550 aa18.76■□□□□ 0.59
TVP23A-210ENST00000612195 NPEPPSP55786 919 aa18.76■□□□□ 0.59
TVP23A-210ENST00000612195 RNASELQ05823 741 aaKnown RBP18.76■□□□□ 0.59
TVP23A-210ENST00000612195 STK3Q13188 491 aa18.76■□□□□ 0.59
TVP23A-210ENST00000612195 ZNF280BQ86YH2 543 aa18.76■□□□□ 0.59
TVP23A-210ENST00000612195 UBALD2Q8IYN6 164 aa18.76■□□□□ 0.59
TVP23A-210ENST00000612195 ZNF579Q8NAF0 562 aaKnown RBP18.76■□□□□ 0.59
TVP23A-210ENST00000612195 SLC22A17Q8WUG5 538 aa18.76■□□□□ 0.59
TVP23A-210ENST00000612195 JPH2Q9BR39 696 aaPredicted RBP18.76■□□□□ 0.59
TVP23A-210ENST00000612195 SLKQ9H2G2 1235 aaPredicted RBP18.76■□□□□ 0.59
TVP23A-210ENST00000612195 CYP26B1Q9NR63 512 aa18.76■□□□□ 0.59
TVP23A-210ENST00000612195 FAM86C1Q9NVL1 165 aa18.76■□□□□ 0.59
TVP23A-210ENST00000612195 DZANK1Q9NVP4 752 aa18.76■□□□□ 0.59
TVP23A-210ENST00000612195 VAV3Q9UKW4 847 aa18.76■□□□□ 0.59
TVP23A-210ENST00000612195 KCNJ14Q9UNX9 436 aa18.76■□□□□ 0.59
TVP23A-210ENST00000612195 SORCS3Q9UPU3 1222 aa18.76■□□□□ 0.59
TVP23A-210ENST00000612195 PCDHB2Q9Y5E7 798 aa18.76■□□□□ 0.59
TVP23A-210ENST00000612195 CARNS1A5YM72 827 aa18.75■□□□□ 0.59
TVP23A-210ENST00000612195 B4GALT3O60512 393 aa18.75■□□□□ 0.59
TVP23A-210ENST00000612195 QARSP47897 775 aaKnown RBP18.75■□□□□ 0.59
TVP23A-210ENST00000612195 RAB27AP51159 221 aa18.75■□□□□ 0.59
TVP23A-210ENST00000612195 MTMR3Q13615 1198 aa18.75■□□□□ 0.59
TVP23A-210ENST00000612195 GIT2Q14161 759 aa18.75■□□□□ 0.59
TVP23A-210ENST00000612195 LETM2Q2VYF4 491 aa18.75■□□□□ 0.59
TVP23A-210ENST00000612195 ATAT1Q5SQI0 421 aa18.75■□□□□ 0.59
TVP23A-210ENST00000612195 KRT25Q7Z3Z0 450 aa18.75■□□□□ 0.59
TVP23A-210ENST00000612195 FEZF2Q8TBJ5 459 aa18.75■□□□□ 0.59
TVP23A-210ENST00000612195 PRPF31Q8WWY3 499 aaKnown RBP18.75■□□□□ 0.59
TVP23A-210ENST00000612195 VN1R3Q9BXE9 311 aa18.75■□□□□ 0.59
TVP23A-210ENST00000612195 SMOC2Q9H3U7 446 aa18.75■□□□□ 0.59
TVP23A-210ENST00000612195 AGPAT5Q9NUQ2 364 aa18.75■□□□□ 0.59
TVP23A-210ENST00000612195 COL4A3BPQ9Y5P4 624 aa18.75■□□□□ 0.59
TVP23A-210ENST00000612195 ASGR2P07307 311 aa18.74■□□□□ 0.59
TVP23A-210ENST00000612195 SRGAP2CP0DJJ0 459 aa18.74■□□□□ 0.59
TVP23A-210ENST00000612195 AFF1P51825 1210 aaKnown RBP18.74■□□□□ 0.59
TVP23A-210ENST00000612195 PPP2R5CQ13362 524 aa18.74■□□□□ 0.59
TVP23A-210ENST00000612195 KIAA1841Q6NSI8 718 aa18.74■□□□□ 0.59
TVP23A-210ENST00000612195 CPLX2Q6PUV4 134 aaKnown RBP18.74■□□□□ 0.59
TVP23A-210ENST00000612195 AGMOQ6ZNB7 445 aa18.74■□□□□ 0.59
TVP23A-210ENST00000612195 FAM177A1Q8N128 213 aaPredicted RBP18.74■□□□□ 0.59
TVP23A-210ENST00000612195 SLC7A3Q8WY07 619 aa18.74■□□□□ 0.59
TVP23A-210ENST00000612195 TMEM143Q96AN5 459 aa18.74■□□□□ 0.59
TVP23A-210ENST00000612195 PGBD4Q96DM1 585 aa18.74■□□□□ 0.59
TVP23A-210ENST00000612195 KCNMB3Q9NPA1 279 aa18.74■□□□□ 0.59
TVP23A-210ENST00000612195 WRAP73Q9P2S5 460 aaPredicted RBP18.74■□□□□ 0.59
TVP23A-210ENST00000612195 LIMD1Q9UGP4 676 aa18.74■□□□□ 0.59
TVP23A-210ENST00000612195 DBR1Q9UK59 544 aaKnown RBP18.74■□□□□ 0.59
TVP23A-210ENST00000612195 DMDP11532 3685 aa18.73■□□□□ 0.59
TVP23A-210ENST00000612195 DDHD2O94830 711 aa18.73■□□□□ 0.59
TVP23A-210ENST00000612195 PTPN14Q15678 1187 aa18.73■□□□□ 0.59
TVP23A-210ENST00000612195 TMC5Q6UXY8 1006 aa18.73■□□□□ 0.59
TVP23A-210ENST00000612195 MRPL10Q7Z7H8 261 aaKnown RBP18.73■□□□□ 0.59
TVP23A-210ENST00000612195 CABP7Q86V35 215 aa18.73■□□□□ 0.59
TVP23A-210ENST00000612195 TDRD5Q8NAT2 981 aaKnown RBP18.73■□□□□ 0.59
TVP23A-210ENST00000612195 URGCPQ8TCY9 931 aa18.73■□□□□ 0.59
TVP23A-210ENST00000612195 ATOH1Q92858 354 aaPredicted RBP18.73■□□□□ 0.59
TVP23A-210ENST00000612195 CEP170P1Q96L14 293 aa18.73■□□□□ 0.59
TVP23A-210ENST00000612195 FAM20AQ96MK3 541 aa18.73■□□□□ 0.59
TVP23A-210ENST00000612195 TM6SF1Q9BZW5 370 aa18.73■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms