RNA–Protein interactions for RNA: ENST00000611068.1

RTN1-209, Transcript of reticulon 1, humanhuman

TSL 5 BASIC

Gene RTN1, Length 2,647 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-209ENST00000611068 A6NHS1 94 aa17.31■□□□□ 0.36
RTN1-209ENST00000611068 PSMA7O14818 248 aa17.31■□□□□ 0.36
RTN1-209ENST00000611068 SLITRK3O94933 977 aa17.31■□□□□ 0.36
RTN1-209ENST00000611068 CYP11B2P19099 503 aa17.31■□□□□ 0.36
RTN1-209ENST00000611068 COASYQ13057 564 aa17.31■□□□□ 0.36
RTN1-209ENST00000611068 TKFCQ3LXA3 575 aa17.31■□□□□ 0.36
RTN1-209ENST00000611068 HERC4Q5GLZ8 1057 aaPredicted RBP17.31■□□□□ 0.36
RTN1-209ENST00000611068 ALS2CLQ60I27 953 aa17.31■□□□□ 0.36
RTN1-209ENST00000611068 HAUS3Q68CZ6 603 aa17.31■□□□□ 0.36
RTN1-209ENST00000611068 KCNJ18B7U540 433 aa17.3■□□□□ 0.36
RTN1-209ENST00000611068 TBX3O15119 743 aa17.3■□□□□ 0.36
RTN1-209ENST00000611068 ATP4AP20648 1035 aa17.3■□□□□ 0.36
RTN1-209ENST00000611068 RPA1P27694 616 aa17.3■□□□□ 0.36
RTN1-209ENST00000611068 ITGB3BPQ13352 177 aaPredicted RBP17.3■□□□□ 0.36
RTN1-209ENST00000611068 BLMHQ13867 455 aa17.3■□□□□ 0.36
RTN1-209ENST00000611068 KCNJ12Q14500 433 aa17.3■□□□□ 0.36
RTN1-209ENST00000611068 NOL9Q5SY16 702 aaKnown RBP17.3■□□□□ 0.36
RTN1-209ENST00000611068 UNC13DQ70J99 1090 aa17.3■□□□□ 0.36
RTN1-209ENST00000611068 IRF2BP1Q8IU81 584 aa17.3■□□□□ 0.36
RTN1-209ENST00000611068 CSGALNACT2Q8N6G5 542 aa17.3■□□□□ 0.36
RTN1-209ENST00000611068 HVCN1Q96D96 273 aa17.3■□□□□ 0.36
RTN1-209ENST00000611068 RUSC1Q9BVN2 902 aa17.3■□□□□ 0.36
RTN1-209ENST00000611068 SEMA6BQ9H3T3 888 aa17.3■□□□□ 0.36
RTN1-209ENST00000611068 MAGEF1Q9HAY2 307 aa17.3■□□□□ 0.36
RTN1-209ENST00000611068 TMEM165Q9HC07 324 aa17.3■□□□□ 0.36
RTN1-209ENST00000611068 KDM3AQ9Y4C1 1321 aa17.3■□□□□ 0.36
RTN1-209ENST00000611068 RNF8O76064 485 aa17.3■□□□□ 0.36
RTN1-209ENST00000611068 PBX1P40424 430 aa17.3■□□□□ 0.36
RTN1-209ENST00000611068 SLC12A3P55017 1021 aa17.3■□□□□ 0.36
RTN1-209ENST00000611068 ROR2Q01974 943 aaKnown RBP17.3■□□□□ 0.36
RTN1-209ENST00000611068 MTMR1Q13613 665 aa17.3■□□□□ 0.36
RTN1-209ENST00000611068 CDKAL1Q5VV42 579 aa17.3■□□□□ 0.36
RTN1-209ENST00000611068 PAPD7Q5XG87 772 aaKnown RBP17.3■□□□□ 0.36
RTN1-209ENST00000611068 USP50Q70EL3 339 aaPredicted RBP17.3■□□□□ 0.36
RTN1-209ENST00000611068 AGAP11Q8TF27 550 aa17.3■□□□□ 0.36
RTN1-209ENST00000611068 SLC5A5Q92911 643 aa17.3■□□□□ 0.36
RTN1-209ENST00000611068 OPTNQ96CV9 577 aa17.3■□□□□ 0.36
RTN1-209ENST00000611068 TSC22D3Q99576 134 aa17.3■□□□□ 0.36
RTN1-209ENST00000611068 PXMP2Q9NR77 195 aa17.3■□□□□ 0.36
RTN1-209ENST00000611068 SLC5A4Q9NY91 659 aa17.3■□□□□ 0.36
RTN1-209ENST00000611068 BTBD7Q9P203 1132 aa17.3■□□□□ 0.36
RTN1-209ENST00000611068 COL11A1P12107 1806 aaPredicted RBP17.3■□□□□ 0.36
RTN1-209ENST00000611068 N4BP3O15049 544 aa17.29■□□□□ 0.36
RTN1-209ENST00000611068 CNTN2Q02246 1040 aa17.29■□□□□ 0.36
RTN1-209ENST00000611068 CNNM4Q6P4Q7 775 aa17.29■□□□□ 0.36
RTN1-209ENST00000611068 EHBP1Q8NDI1 1231 aa17.29■□□□□ 0.36
RTN1-209ENST00000611068 ALS2CR12Q96Q35 445 aa17.29■□□□□ 0.36
RTN1-209ENST00000611068 DUSP9Q99956 384 aaKnown RBP17.29■□□□□ 0.36
RTN1-209ENST00000611068 HOXC10Q9NYD6 342 aa17.29■□□□□ 0.36
RTN1-209ENST00000611068 ZSCAN9O15535 394 aaPredicted RBP17.29■□□□□ 0.36
RTN1-209ENST00000611068 MYL1P05976 194 aa17.29■□□□□ 0.36
RTN1-209ENST00000611068 CLTAP09496 248 aa17.29■□□□□ 0.36
RTN1-209ENST00000611068 HPDP32754 393 aaPredicted RBP17.29■□□□□ 0.36
RTN1-209ENST00000611068 MAGEA8P43361 318 aa17.29■□□□□ 0.36
RTN1-209ENST00000611068 CTCFP49711 727 aaPredicted RBP17.29■□□□□ 0.36
RTN1-209ENST00000611068 TCP11X2Q5H9J9 407 aa17.29■□□□□ 0.36
RTN1-209ENST00000611068 SEC16BQ96JE7 1060 aa17.29■□□□□ 0.36
RTN1-209ENST00000611068 L3MBTL3Q96JM7 780 aaPredicted RBP17.29■□□□□ 0.36
RTN1-209ENST00000611068 C12orf42Q96LP6 360 aa17.29■□□□□ 0.36
RTN1-209ENST00000611068 PDCD2LQ9BRP1 358 aa17.29■□□□□ 0.36
RTN1-209ENST00000611068 B4DLN1 442 aa17.28■□□□□ 0.36
RTN1-209ENST00000611068 DNAJC8O75937 253 aaPredicted RBP17.28■□□□□ 0.36
RTN1-209ENST00000611068 FERP16591 822 aa17.28■□□□□ 0.36
RTN1-209ENST00000611068 CKAP4Q07065 602 aaKnown RBP17.28■□□□□ 0.36
RTN1-209ENST00000611068 LACTB2Q53H82 288 aaPredicted RBP17.28■□□□□ 0.36
RTN1-209ENST00000611068 TTI2Q6NXR4 508 aa17.28■□□□□ 0.36
RTN1-209ENST00000611068 PNMA8AQ86V59 439 aaPredicted RBP17.28■□□□□ 0.36
RTN1-209ENST00000611068 P2RX5Q93086 422 aa17.28■□□□□ 0.36
RTN1-209ENST00000611068 RPGRIP1Q96KN7 1286 aa17.28■□□□□ 0.36
RTN1-209ENST00000611068 CHP1Q99653 195 aa17.28■□□□□ 0.36
RTN1-209ENST00000611068 REEP2Q9BRK0 252 aa17.28■□□□□ 0.36
RTN1-209ENST00000611068 TEX13BQ9BXU2 312 aa17.28■□□□□ 0.36
RTN1-209ENST00000611068 IKZF4Q9H2S9 585 aa17.28■□□□□ 0.36
RTN1-209ENST00000611068 BLOC1S6Q9UL45 172 aa17.28■□□□□ 0.36
RTN1-209ENST00000611068 PHIPQ8WWQ0 1821 aa17.28■□□□□ 0.36
RTN1-209ENST00000611068 SMIM24O75264 130 aa17.28■□□□□ 0.36
RTN1-209ENST00000611068 GCLCP48506 637 aaPredicted RBP17.28■□□□□ 0.36
RTN1-209ENST00000611068 SCNN1BP51168 640 aa17.28■□□□□ 0.36
RTN1-209ENST00000611068 CASP5P51878 434 aa17.28■□□□□ 0.36
RTN1-209ENST00000611068 HYIQ5T013 277 aa17.28■□□□□ 0.36
RTN1-209ENST00000611068 WDR78Q5VTH9 848 aa17.28■□□□□ 0.36
RTN1-209ENST00000611068 ARHGAP22Q7Z5H3 698 aa17.28■□□□□ 0.36
RTN1-209ENST00000611068 TMTC1Q8IUR5 882 aa17.28■□□□□ 0.36
RTN1-209ENST00000611068 ANKRD13AQ8IZ07 590 aa17.28■□□□□ 0.36
RTN1-209ENST00000611068 FAM81AQ8TBF8 368 aa17.28■□□□□ 0.36
RTN1-209ENST00000611068 CCDC43Q96MW1 224 aaKnown RBP17.28■□□□□ 0.36
RTN1-209ENST00000611068 HSD17B14Q9BPX1 270 aa17.28■□□□□ 0.36
RTN1-209ENST00000611068 TEKT3Q9BXF9 490 aa17.28■□□□□ 0.36
RTN1-209ENST00000611068 RABGAP1Q9Y3P9 1069 aa17.28■□□□□ 0.36
RTN1-209ENST00000611068 FECHP22830 423 aa17.27■□□□□ 0.36
RTN1-209ENST00000611068 ABCD1P33897 745 aa17.27■□□□□ 0.36
RTN1-209ENST00000611068 MATR3P43243 847 aaKnown RBP eCLIP17.27■□□□□ 0.36
RTN1-209ENST00000611068 PPP1R15BQ5SWA1 713 aa17.27■□□□□ 0.36
RTN1-209ENST00000611068 PLEKHG4BQ96PX9 1271 aa17.27■□□□□ 0.36
RTN1-209ENST00000611068 ZFATQ9P243 1243 aa17.27■□□□□ 0.36
RTN1-209ENST00000611068 ADD3Q9UEY8 706 aaKnown RBP17.27■□□□□ 0.36
RTN1-209ENST00000611068 NR3C2P08235 984 aa17.27■□□□□ 0.35
RTN1-209ENST00000611068 IMPDH2P12268 514 aa17.27■□□□□ 0.35
RTN1-209ENST00000611068 EPHB4P54760 987 aa17.27■□□□□ 0.35
RTN1-209ENST00000611068 CRELD2Q6UXH1 353 aaPredicted RBP17.27■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms