RNA–Protein interactions for RNA: ENST00000611016.2

TNXB-208, Transcript of tenascin XB, humanhuman

TSL 5 BASIC

Gene TNXB, Length 6,083 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNXB-208ENST00000611016 TBXAS1P24557 533 aaPredicted RBP16.69■□□□□ 0.26
TNXB-208ENST00000611016 GPC5P78333 572 aa16.69■□□□□ 0.26
TNXB-208ENST00000611016 KIF12Q96FN5 646 aa16.69■□□□□ 0.26
TNXB-208ENST00000611016 KLC2Q9H0B6 622 aa16.69■□□□□ 0.26
TNXB-208ENST00000611016 SEL1LQ9UBV2 794 aa16.69■□□□□ 0.26
TNXB-208ENST00000611016 DEUP1Q05D60 604 aa16.68■□□□□ 0.26
TNXB-208ENST00000611016 KCNV1Q6PIU1 500 aa16.68■□□□□ 0.26
TNXB-208ENST00000611016 ZNF70Q9UC06 446 aaPredicted RBP16.68■□□□□ 0.26
TNXB-208ENST00000611016 LRRC53A6NM62 1247 aa16.68■□□□□ 0.26
TNXB-208ENST00000611016 TAC1P20366 129 aa16.68■□□□□ 0.26
TNXB-208ENST00000611016 STAT5BP51692 787 aa16.68■□□□□ 0.26
TNXB-208ENST00000611016 TFDP2Q14188 446 aa16.68■□□□□ 0.26
TNXB-208ENST00000611016 MARCH10Q8NA82 808 aaPredicted RBP16.68■□□□□ 0.26
TNXB-208ENST00000611016 FMO2Q99518 471 aa16.68■□□□□ 0.26
TNXB-208ENST00000611016 RBAKQ9NYW8 714 aaPredicted RBP16.68■□□□□ 0.26
TNXB-208ENST00000611016 TRPM1Q7Z4N2 1603 aa16.68■□□□□ 0.26
TNXB-208ENST00000611016 LGALS16A8MUM7 142 aa16.68■□□□□ 0.26
TNXB-208ENST00000611016 PALMO75781 387 aa16.68■□□□□ 0.26
TNXB-208ENST00000611016 CPB1P15086 417 aa16.68■□□□□ 0.26
TNXB-208ENST00000611016 SF3B3Q15393 1217 aaKnown RBP16.68■□□□□ 0.26
TNXB-208ENST00000611016 ZNF34Q8IZ26 560 aa16.68■□□□□ 0.26
TNXB-208ENST00000611016 IFT43Q96FT9 208 aa16.68■□□□□ 0.26
TNXB-208ENST00000611016 WDR91A4D1P6 747 aa16.68■□□□□ 0.26
TNXB-208ENST00000611016 A8MXQ7 604 aa16.68■□□□□ 0.26
TNXB-208ENST00000611016 ESRRGP62508 458 aa16.68■□□□□ 0.26
TNXB-208ENST00000611016 PRAMEF18Q5VWM3 479 aa16.68■□□□□ 0.26
TNXB-208ENST00000611016 GPD1LQ8N335 351 aa16.68■□□□□ 0.26
TNXB-208ENST00000611016 VPS39Q96JC1 886 aa16.68■□□□□ 0.26
TNXB-208ENST00000611016 FSD1LQ9BXM9 530 aa16.68■□□□□ 0.26
TNXB-208ENST00000611016 ZMYND12Q9H0C1 365 aa16.68■□□□□ 0.26
TNXB-208ENST00000611016 INTS2Q9H0H0 1204 aaKnown RBP16.68■□□□□ 0.26
TNXB-208ENST00000611016 TSPYL2Q9H2G4 693 aaPredicted RBP16.68■□□□□ 0.26
TNXB-208ENST00000611016 CLTAP09496 248 aa16.67■□□□□ 0.26
TNXB-208ENST00000611016 GNA15P30679 374 aa16.67■□□□□ 0.26
TNXB-208ENST00000611016 RSBN1LQ6PCB5 846 aaPredicted RBP16.67■□□□□ 0.26
TNXB-208ENST00000611016 SRBD1Q8N5C6 995 aaKnown RBP16.67■□□□□ 0.26
TNXB-208ENST00000611016 EPHA7Q15375 998 aa16.67■□□□□ 0.26
TNXB-208ENST00000611016 RNF149Q8NC42 400 aa16.67■□□□□ 0.26
TNXB-208ENST00000611016 ZNF280CQ8ND82 737 aa16.67■□□□□ 0.26
TNXB-208ENST00000611016 SDC4P31431 198 aa16.67■□□□□ 0.26
TNXB-208ENST00000611016 YWHABP31946 246 aaKnown RBP16.67■□□□□ 0.26
TNXB-208ENST00000611016 KYAT1Q16773 422 aa16.67■□□□□ 0.26
TNXB-208ENST00000611016 CDC42EP5Q6NZY7 148 aa16.67■□□□□ 0.26
TNXB-208ENST00000611016 MTMR4Q9NYA4 1195 aa16.67■□□□□ 0.26
TNXB-208ENST00000611016 AGO2Q9UKV8 859 aaKnown RBP16.67■□□□□ 0.26
TNXB-208ENST00000611016 CROCC2H7BZ55 1655 aa16.67■□□□□ 0.26
TNXB-208ENST00000611016 QRICH2Q9H0J4 1663 aa16.67■□□□□ 0.26
TNXB-208ENST00000611016 NEMP1O14524 444 aa16.67■□□□□ 0.26
TNXB-208ENST00000611016 GRIN3BO60391 1043 aa16.67■□□□□ 0.26
TNXB-208ENST00000611016 ZRANB2O95218 330 aaKnown RBP eCLIP16.67■□□□□ 0.26
TNXB-208ENST00000611016 CCT5P48643 541 aa16.67■□□□□ 0.26
TNXB-208ENST00000611016 CEP55Q53EZ4 464 aa16.67■□□□□ 0.26
TNXB-208ENST00000611016 TTC30BQ8N4P2 665 aa16.67■□□□□ 0.26
TNXB-208ENST00000611016 ALDH8A1Q9H2A2 487 aaPredicted RBP16.67■□□□□ 0.26
TNXB-208ENST00000611016 G3BP2Q9UN86 482 aaKnown RBP16.67■□□□□ 0.26
TNXB-208ENST00000611016 PSMD14O00487 310 aa16.67■□□□□ 0.26
TNXB-208ENST00000611016 LMNAP02545 664 aaKnown RBP16.67■□□□□ 0.26
TNXB-208ENST00000611016 SNAPC2Q13487 334 aa16.67■□□□□ 0.26
TNXB-208ENST00000611016 KIAA1755Q5JYT7 1200 aa16.67■□□□□ 0.26
TNXB-208ENST00000611016 TRIM67Q6ZTA4 783 aa16.67■□□□□ 0.26
TNXB-208ENST00000611016 RBM46Q8TBY0 533 aaKnown RBP16.67■□□□□ 0.26
TNXB-208ENST00000611016 GIPC2Q8TF65 315 aa16.67■□□□□ 0.26
TNXB-208ENST00000611016 MRPL40Q9NQ50 206 aaKnown RBP16.67■□□□□ 0.26
TNXB-208ENST00000611016 PCSK1NQ9UHG2 260 aa16.67■□□□□ 0.26
TNXB-208ENST00000611016 A0A087WUV0 522 aaPredicted RBP16.66■□□□□ 0.26
TNXB-208ENST00000611016 SLC26A4O43511 780 aa16.66■□□□□ 0.26
TNXB-208ENST00000611016 KRT37O76014 449 aa16.66■□□□□ 0.26
TNXB-208ENST00000611016 INPP1P49441 399 aa16.66■□□□□ 0.26
TNXB-208ENST00000611016 GFPT1Q06210 699 aaPredicted RBP16.66■□□□□ 0.26
TNXB-208ENST00000611016 NME3Q13232 169 aa16.66■□□□□ 0.26
TNXB-208ENST00000611016 SKIV2LQ15477 1246 aaKnown RBP16.66■□□□□ 0.26
TNXB-208ENST00000611016 GGA3Q9NZ52 723 aa16.66■□□□□ 0.26
TNXB-208ENST00000611016 GSTA4O15217 222 aa16.66■□□□□ 0.26
TNXB-208ENST00000611016 MYBL1P10243 752 aa16.66■□□□□ 0.26
TNXB-208ENST00000611016 PSMC1P62191 440 aaKnown RBP16.66■□□□□ 0.26
TNXB-208ENST00000611016 BAATQ14032 418 aaPredicted RBP16.66■□□□□ 0.26
TNXB-208ENST00000611016 TAF1BQ53T94 588 aaPredicted RBP16.66■□□□□ 0.26
TNXB-208ENST00000611016 STAP1Q9ULZ2 295 aa16.66■□□□□ 0.26
TNXB-208ENST00000611016 SCAF8Q9UPN6 1271 aaKnown RBP16.66■□□□□ 0.26
TNXB-208ENST00000611016 C19orf81C9J6K1 198 aa16.66■□□□□ 0.26
TNXB-208ENST00000611016 MOCS2O96007 188 aaPredicted RBP16.66■□□□□ 0.26
TNXB-208ENST00000611016 NNMTP40261 264 aa16.66■□□□□ 0.26
TNXB-208ENST00000611016 AP3M2P53677 418 aa16.66■□□□□ 0.26
TNXB-208ENST00000611016 NNTQ13423 1086 aa16.66■□□□□ 0.26
TNXB-208ENST00000611016 SGMS1Q86VZ5 419 aa16.66■□□□□ 0.26
TNXB-208ENST00000611016 TMEM106CQ9BVX2 250 aa16.66■□□□□ 0.26
TNXB-208ENST00000611016 TEX13BQ9BXU2 312 aa16.66■□□□□ 0.26
TNXB-208ENST00000611016 PIN4Q9Y237 131 aaKnown RBP16.66■□□□□ 0.26
TNXB-208ENST00000611016 SEC23IPQ9Y6Y8 1000 aaKnown RBP16.66■□□□□ 0.26
TNXB-208ENST00000611016 CDC42BPBQ9Y5S2 1711 aa16.66■□□□□ 0.26
TNXB-208ENST00000611016 CTNND1O60716 968 aaKnown RBP16.66■□□□□ 0.26
TNXB-208ENST00000611016 PAPOLAP51003 745 aaKnown RBP16.66■□□□□ 0.26
TNXB-208ENST00000611016 RABL6Q3YEC7 729 aaPredicted RBP16.66■□□□□ 0.26
TNXB-208ENST00000611016 RNF168Q8IYW5 571 aaPredicted RBP16.66■□□□□ 0.26
TNXB-208ENST00000611016 SPDL1Q96EA4 605 aa16.66■□□□□ 0.26
TNXB-208ENST00000611016 MMTAG2Q9BU76 263 aaKnown RBP16.66■□□□□ 0.26
TNXB-208ENST00000611016 EIF2AQ9BY44 585 aaKnown RBP16.66■□□□□ 0.26
TNXB-208ENST00000611016 GNGT2O14610 69 aa16.65■□□□□ 0.26
TNXB-208ENST00000611016 ACSL3O95573 720 aa16.65■□□□□ 0.26
TNXB-208ENST00000611016 TRIM68Q6AZZ1 485 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms