RNA–Protein interactions for RNA: ENST00000610401.4

SSBP3-216, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 5 BASIC

Gene SSBP3, Length 3,168 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-216ENST00000610401 RAB17Q9H0T7 212 aa22.04■■□□□ 1.12
SSBP3-216ENST00000610401 WRAP73Q9P2S5 460 aaPredicted RBP22.04■■□□□ 1.12
SSBP3-216ENST00000610401 CCDC88AQ3V6T2 1871 aa22.04■■□□□ 1.12
SSBP3-216ENST00000610401 SWT1Q5T5J6 900 aaKnown RBP22.03■■□□□ 1.12
SSBP3-216ENST00000610401 ARHGEF19Q8IW93 802 aa22.03■■□□□ 1.12
SSBP3-216ENST00000610401 RPUSD2Q8IZ73 545 aaKnown RBP22.03■■□□□ 1.12
SSBP3-216ENST00000610401 PRCCQ92733 491 aaPredicted RBP22.03■■□□□ 1.12
SSBP3-216ENST00000610401 TRIM37O94972 964 aa22.03■■□□□ 1.12
SSBP3-216ENST00000610401 COMTP21964 271 aa22.03■■□□□ 1.12
SSBP3-216ENST00000610401 SMARCA1P28370 1054 aa22.03■■□□□ 1.12
SSBP3-216ENST00000610401 ORC2Q13416 577 aaPredicted RBP22.03■■□□□ 1.12
SSBP3-216ENST00000610401 LRCH2Q5VUJ6 765 aa22.03■■□□□ 1.12
SSBP3-216ENST00000610401 PPP4R3CPQ6ZMV5 832 aa22.03■■□□□ 1.12
SSBP3-216ENST00000610401 SPATS2Q86XZ4 545 aaKnown RBP22.03■■□□□ 1.12
SSBP3-216ENST00000610401 LENG9Q96B70 501 aa22.03■■□□□ 1.12
SSBP3-216ENST00000610401 CALR3Q96L12 384 aaKnown RBP22.03■■□□□ 1.12
SSBP3-216ENST00000610401 SLITRK6Q9H5Y7 841 aa22.03■■□□□ 1.12
SSBP3-216ENST00000610401 TRIM33Q9UPN9 1127 aa22.03■■□□□ 1.12
SSBP3-216ENST00000610401 LAMB1P07942 1786 aa22.03■■□□□ 1.12
SSBP3-216ENST00000610401 PYGMP11217 842 aa22.03■■□□□ 1.12
SSBP3-216ENST00000610401 JAM2P57087 298 aa22.03■■□□□ 1.12
SSBP3-216ENST00000610401 AMNQ9BXJ7 453 aa22.03■■□□□ 1.12
SSBP3-216ENST00000610401 hCG_1984214I3L0E3 225 aa22.02■■□□□ 1.12
SSBP3-216ENST00000610401 IL1R1P14778 569 aa22.02■■□□□ 1.12
SSBP3-216ENST00000610401 FAM182AQ5T1J6 154 aa22.02■■□□□ 1.12
SSBP3-216ENST00000610401 C10orf76Q5T2E6 689 aa22.02■■□□□ 1.12
SSBP3-216ENST00000610401 ZNF713Q8N859 430 aaPredicted RBP22.02■■□□□ 1.12
SSBP3-216ENST00000610401 FGFR1OP2Q9NVK5 253 aa22.02■■□□□ 1.12
SSBP3-216ENST00000610401 GEMIN8Q9NWZ8 242 aaKnown RBP22.02■■□□□ 1.12
SSBP3-216ENST00000610401 CNTNAP4Q9C0A0 1308 aa22.02■■□□□ 1.12
SSBP3-216ENST00000610401 ZBTB48P10074 688 aaPredicted RBP22.02■■□□□ 1.12
SSBP3-216ENST00000610401 JAG1P78504 1218 aa22.02■■□□□ 1.12
SSBP3-216ENST00000610401 MTM1Q13496 603 aa22.02■■□□□ 1.12
SSBP3-216ENST00000610401 NAA25Q14CX7 972 aa22.02■■□□□ 1.12
SSBP3-216ENST00000610401 METTL14Q9HCE5 456 aaKnown RBP22.02■■□□□ 1.12
SSBP3-216ENST00000610401 SAMD15Q9P1V8 674 aa22.02■■□□□ 1.12
SSBP3-216ENST00000610401 EMSYQ7Z589 1322 aa22.02■■□□□ 1.12
SSBP3-216ENST00000610401 DDX60LQ5H9U9 1706 aaKnown RBP22.02■■□□□ 1.12
SSBP3-216ENST00000610401 SMCHD1A6NHR9 2005 aa22.02■■□□□ 1.12
SSBP3-216ENST00000610401 A8MUI8 341 aa22.01■■□□□ 1.11
SSBP3-216ENST00000610401 SORBS3O60504 671 aa22.01■■□□□ 1.11
SSBP3-216ENST00000610401 GH2P01242 217 aa22.01■■□□□ 1.11
SSBP3-216ENST00000610401 GBP2P32456 591 aaPredicted RBP22.01■■□□□ 1.11
SSBP3-216ENST00000610401 ECE1P42892 770 aa22.01■■□□□ 1.11
SSBP3-216ENST00000610401 SSR1P43307 286 aaKnown RBP22.01■■□□□ 1.11
SSBP3-216ENST00000610401 BARGINQ6ZT62 677 aa22.01■■□□□ 1.11
SSBP3-216ENST00000610401 HEMGNQ9BXL5 484 aa22.01■■□□□ 1.11
SSBP3-216ENST00000610401 EPB41L4BQ9H329 900 aa22.01■■□□□ 1.11
SSBP3-216ENST00000610401 PARVGQ9HBI0 331 aa22.01■■□□□ 1.11
SSBP3-216ENST00000610401 LRRC4BQ9NT99 713 aa22.01■■□□□ 1.11
SSBP3-216ENST00000610401 ABCA3Q99758 1704 aa22.01■■□□□ 1.11
SSBP3-216ENST00000610401 SGPL1O95470 568 aa22.01■■□□□ 1.11
SSBP3-216ENST00000610401 PTENP60484 403 aa22.01■■□□□ 1.11
SSBP3-216ENST00000610401 SGSM3Q96HU1 749 aa22.01■■□□□ 1.11
SSBP3-216ENST00000610401 RBM17Q96I25 401 aaKnown RBP22.01■■□□□ 1.11
SSBP3-216ENST00000610401 MYO3BQ8WXR4 1341 aa22.01■■□□□ 1.11
SSBP3-216ENST00000610401 CLDN3O15551 220 aa22.01■■□□□ 1.11
SSBP3-216ENST00000610401 NDUFB10O96000 172 aa22.01■■□□□ 1.11
SSBP3-216ENST00000610401 GH1P01241 217 aa22.01■■□□□ 1.11
SSBP3-216ENST00000610401 LMNB1P20700 586 aa22.01■■□□□ 1.11
SSBP3-216ENST00000610401 HYIQ5T013 277 aa22.01■■□□□ 1.11
SSBP3-216ENST00000610401 PRELID2Q8N945 189 aa22.01■■□□□ 1.11
SSBP3-216ENST00000610401 ASIC3Q9UHC3 531 aa22.01■■□□□ 1.11
SSBP3-216ENST00000610401 K7ENM7 598 aa22■■□□□ 1.11
SSBP3-216ENST00000610401 CYP26A1O43174 497 aa22■■□□□ 1.11
SSBP3-216ENST00000610401 UPP2O95045 317 aa22■■□□□ 1.11
SSBP3-216ENST00000610401 PRKCIP41743 596 aa22■■□□□ 1.11
SSBP3-216ENST00000610401 KCNJ2P63252 427 aa22■■□□□ 1.11
SSBP3-216ENST00000610401 MYO1EQ12965 1108 aa22■■□□□ 1.11
SSBP3-216ENST00000610401 MAPK7Q13164 816 aa22■■□□□ 1.11
SSBP3-216ENST00000610401 ZFYVE27Q5T4F4 411 aa22■■□□□ 1.11
SSBP3-216ENST00000610401 ZDHHC24Q6UX98 284 aa22■■□□□ 1.11
SSBP3-216ENST00000610401 HOOK3Q86VS8 718 aa22■■□□□ 1.11
SSBP3-216ENST00000610401 STAMBPL1Q96FJ0 436 aa22■■□□□ 1.11
SSBP3-216ENST00000610401 CBWD1Q9BRT8 395 aa22■■□□□ 1.11
SSBP3-216ENST00000610401 TRIM7Q9C029 511 aa22■■□□□ 1.11
SSBP3-216ENST00000610401 PABPC3Q9H361 631 aaKnown RBP22■■□□□ 1.11
SSBP3-216ENST00000610401 PITPNM2Q9BZ72 1349 aa22■■□□□ 1.11
SSBP3-216ENST00000610401 KIAA0391O15091 583 aaKnown RBP22■■□□□ 1.11
SSBP3-216ENST00000610401 SLITRK3O94933 977 aa22■■□□□ 1.11
SSBP3-216ENST00000610401 MAP2K1Q02750 393 aaPredicted RBP22■■□□□ 1.11
SSBP3-216ENST00000610401 DUPD1Q68J44 220 aa22■■□□□ 1.11
SSBP3-216ENST00000610401 EPM2AIP1Q7L775 607 aaPredicted RBP22■■□□□ 1.11
SSBP3-216ENST00000610401 SLFN11Q7Z7L1 901 aa22■■□□□ 1.11
SSBP3-216ENST00000610401 ANKS4BQ8N8V4 417 aa22■■□□□ 1.11
SSBP3-216ENST00000610401 CCDC63Q8NA47 563 aa22■■□□□ 1.11
SSBP3-216ENST00000610401 TBC1D22AQ8WUA7 517 aa22■■□□□ 1.11
SSBP3-216ENST00000610401 WDR18Q9BV38 432 aa22■■□□□ 1.11
SSBP3-216ENST00000610401 STK33Q9BYT3 514 aa22■■□□□ 1.11
SSBP3-216ENST00000610401 AGPAT3Q9NRZ7 376 aa22■■□□□ 1.11
SSBP3-216ENST00000610401 IGKV6D-41A0A0C4DH26 115 aa21.99■■□□□ 1.11
SSBP3-216ENST00000610401 TCP11X1B4DZS4 312 aa21.99■■□□□ 1.11
SSBP3-216ENST00000610401 RASGRF2O14827 1237 aa21.99■■□□□ 1.11
SSBP3-216ENST00000610401 GAS7O60861 476 aa21.99■■□□□ 1.11
SSBP3-216ENST00000610401 ERMARDQ5T6L9 678 aa21.99■■□□□ 1.11
SSBP3-216ENST00000610401 NUGGCQ68CJ6 796 aa21.99■■□□□ 1.11
SSBP3-216ENST00000610401 RASGEF1CQ8N431 466 aa21.99■■□□□ 1.11
SSBP3-216ENST00000610401 CCT6BQ92526 530 aa21.99■■□□□ 1.11
SSBP3-216ENST00000610401 APEX2Q9UBZ4 518 aa21.99■■□□□ 1.11
SSBP3-216ENST00000610401 AGAP1Q9UPQ3 857 aa21.99■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms