RNA–Protein interactions for RNA: ENST00000607494.5

LINC00458-206, long intergenic non-protein coding RNA 458, humanhuman

TSL 3 BASIC

Gene LINC00458, Length 849 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00458-206ENST00000607494 C8orf48Q96LL4 319 aa7.33□□□□□ -1.24
LINC00458-206ENST00000607494 FOXB1Q99853 325 aa7.33□□□□□ -1.24
LINC00458-206ENST00000607494 A0A087X1B8 175 aa7.32□□□□□ -1.24
LINC00458-206ENST00000607494 FAM83GA6ND36 823 aa7.32□□□□□ -1.24
LINC00458-206ENST00000607494 MAFO75444 373 aaPredicted RBP7.32□□□□□ -1.24
LINC00458-206ENST00000607494 POU3F2P20265 443 aaPredicted RBP7.32□□□□□ -1.24
LINC00458-206ENST00000607494 MECP2P51608 486 aaKnown RBP7.32□□□□□ -1.24
LINC00458-206ENST00000607494 TBX4P57082 545 aa7.32□□□□□ -1.24
LINC00458-206ENST00000607494 TTF1Q15361 905 aaPredicted RBP7.32□□□□□ -1.24
LINC00458-206ENST00000607494 SMN1Q16637 294 aaKnown RBP7.32□□□□□ -1.24
LINC00458-206ENST00000607494 PIK3R6Q5UE93 754 aa7.32□□□□□ -1.24
LINC00458-206ENST00000607494 RAVER1Q8IY67 606 aaKnown RBP7.32□□□□□ -1.24
LINC00458-206ENST00000607494 ANKRD53Q8N9V6 530 aa7.32□□□□□ -1.24
LINC00458-206ENST00000607494 CHST14Q8NCH0 376 aa7.32□□□□□ -1.24
LINC00458-206ENST00000607494 LEO1Q8WVC0 666 aaPredicted RBP7.32□□□□□ -1.24
LINC00458-206ENST00000607494 PCIF1Q9H4Z3 704 aa7.32□□□□□ -1.24
LINC00458-206ENST00000607494 ZNF703Q9H7S9 590 aaPredicted RBP7.32□□□□□ -1.24
LINC00458-206ENST00000607494 CABP5Q9NP86 173 aa7.32□□□□□ -1.24
LINC00458-206ENST00000607494 SAE1Q9UBE0 346 aaPredicted RBP7.32□□□□□ -1.24
LINC00458-206ENST00000607494 GABBR1Q9UBS5 961 aa7.32□□□□□ -1.24
LINC00458-206ENST00000607494 DENND2AQ9ULE3 1009 aa7.32□□□□□ -1.24
LINC00458-206ENST00000607494 PMS2P1A4D2B8 440 aa7.31□□□□□ -1.24
LINC00458-206ENST00000607494 PLEKHD1A6NEE1 506 aa7.31□□□□□ -1.24
LINC00458-206ENST00000607494 PRC1O43663 620 aa7.31□□□□□ -1.24
LINC00458-206ENST00000607494 ASLP04424 464 aa7.31□□□□□ -1.24
LINC00458-206ENST00000607494 INHBEP58166 350 aa7.31□□□□□ -1.24
LINC00458-206ENST00000607494 BPIFB4P59827 614 aa7.31□□□□□ -1.24
LINC00458-206ENST00000607494 ROM1Q03395 351 aa7.31□□□□□ -1.24
LINC00458-206ENST00000607494 NFE2Q16621 373 aaPredicted RBP7.31□□□□□ -1.24
LINC00458-206ENST00000607494 CCAR1Q8IX12 1150 aaKnown RBP7.31□□□□□ -1.24
LINC00458-206ENST00000607494 E2F7Q96AV8 911 aa7.31□□□□□ -1.24
LINC00458-206ENST00000607494 SLC7A6OSQ96CW6 309 aaPredicted RBP7.31□□□□□ -1.24
LINC00458-206ENST00000607494 VWA7Q9Y334 891 aa7.31□□□□□ -1.24
LINC00458-206ENST00000607494 RIPOR2Q9Y4F9 1068 aa7.31□□□□□ -1.24
LINC00458-206ENST00000607494 H7C1D1 291 aa7.3□□□□□ -1.24
LINC00458-206ENST00000607494 TRAF5O00463 557 aa7.3□□□□□ -1.24
LINC00458-206ENST00000607494 RPS6KA4O75676 772 aa7.3□□□□□ -1.24
LINC00458-206ENST00000607494 TGM1P22735 817 aa7.3□□□□□ -1.24
LINC00458-206ENST00000607494 INHBCP55103 352 aa7.3□□□□□ -1.24
LINC00458-206ENST00000607494 TCIRG1Q13488 830 aa7.3□□□□□ -1.24
LINC00458-206ENST00000607494 ZNF174Q15697 407 aa7.3□□□□□ -1.24
LINC00458-206ENST00000607494 KRTAP15-1Q3LI76 137 aa7.3□□□□□ -1.24
LINC00458-206ENST00000607494 SLFN12LQ6IEE8 588 aa7.3□□□□□ -1.24
LINC00458-206ENST00000607494 NECAB2Q7Z6G3 386 aa7.3□□□□□ -1.24
LINC00458-206ENST00000607494 CCDC146Q8IYE0 955 aa7.3□□□□□ -1.24
LINC00458-206ENST00000607494 THEMISQ8N1K5 641 aaPredicted RBP7.3□□□□□ -1.24
LINC00458-206ENST00000607494 KIAA1958Q8N8K9 716 aa7.3□□□□□ -1.24
LINC00458-206ENST00000607494 GCDHQ92947 438 aaPredicted RBP7.3□□□□□ -1.24
LINC00458-206ENST00000607494 PSMD1Q99460 953 aa7.3□□□□□ -1.24
LINC00458-206ENST00000607494 SLC6A15Q9H2J7 730 aa7.3□□□□□ -1.24
LINC00458-206ENST00000607494 ACSS2Q9NR19 701 aa7.3□□□□□ -1.24
LINC00458-206ENST00000607494 AURKAIP1Q9NWT8 199 aaPredicted RBP7.3□□□□□ -1.24
LINC00458-206ENST00000607494 PHLDB1Q86UU1 1377 aa7.3□□□□□ -1.24
LINC00458-206ENST00000607494 UBA6A0AVT1 1052 aaPredicted RBP7.29□□□□□ -1.24
LINC00458-206ENST00000607494 GOLGA8BA8MQT2 603 aa7.29□□□□□ -1.24
LINC00458-206ENST00000607494 CYP27B1O15528 508 aa7.29□□□□□ -1.24
LINC00458-206ENST00000607494 TPD52L2O43399 206 aaKnown RBP7.29□□□□□ -1.24
LINC00458-206ENST00000607494 H2AFYO75367 372 aaKnown RBP7.29□□□□□ -1.24
LINC00458-206ENST00000607494 KATNA1O75449 491 aa7.29□□□□□ -1.24
LINC00458-206ENST00000607494 JMJD7P0C870 316 aa7.29□□□□□ -1.24
LINC00458-206ENST00000607494 KRT4P19013 534 aa7.29□□□□□ -1.24
LINC00458-206ENST00000607494 MAKP20794 623 aa7.29□□□□□ -1.24
LINC00458-206ENST00000607494 FNTBP49356 437 aa7.29□□□□□ -1.24
LINC00458-206ENST00000607494 STRN3Q13033 797 aa7.29□□□□□ -1.24
LINC00458-206ENST00000607494 DHCR24Q15392 516 aa7.29□□□□□ -1.24
LINC00458-206ENST00000607494 PRAMEF9Q5VWM5 478 aa7.29□□□□□ -1.24
LINC00458-206ENST00000607494 Q6ZPA2 131 aa7.29□□□□□ -1.24
LINC00458-206ENST00000607494 UBE2R2Q712K3 238 aaPredicted RBP7.29□□□□□ -1.24
LINC00458-206ENST00000607494 TSR2Q969E8 191 aaKnown RBP7.29□□□□□ -1.24
LINC00458-206ENST00000607494 NKD2Q969F2 451 aaPredicted RBP7.29□□□□□ -1.24
LINC00458-206ENST00000607494 MAML3Q96JK9 1138 aa7.29□□□□□ -1.24
LINC00458-206ENST00000607494 TUBGCP5Q96RT8 1024 aa7.29□□□□□ -1.24
LINC00458-206ENST00000607494 AGAP2Q99490 1192 aa7.29□□□□□ -1.24
LINC00458-206ENST00000607494 MPHOSPH9Q99550 1183 aa7.29□□□□□ -1.24
LINC00458-206ENST00000607494 PCGF6Q9BYE7 350 aa7.29□□□□□ -1.24
LINC00458-206ENST00000607494 PARPBPQ9NWS1 579 aa7.29□□□□□ -1.24
LINC00458-206ENST00000607494 DNAI1Q9UI46 699 aa7.29□□□□□ -1.24
LINC00458-206ENST00000607494 UBE2QL1A1L167 161 aa7.28□□□□□ -1.24
LINC00458-206ENST00000607494 TSPAN6O43657 245 aa7.28□□□□□ -1.24
LINC00458-206ENST00000607494 SLC9A1P19634 815 aa7.28□□□□□ -1.24
LINC00458-206ENST00000607494 PTX3P26022 381 aaPredicted RBP7.28□□□□□ -1.24
LINC00458-206ENST00000607494 NEK4P51957 841 aa7.28□□□□□ -1.24
LINC00458-206ENST00000607494 PCBP1Q15365 356 aaKnown RBP eCLIP7.28□□□□□ -1.24
LINC00458-206ENST00000607494 ELAVL1Q15717 326 aaKnown RBP7.28□□□□□ -1.24
LINC00458-206ENST00000607494 DGKDQ16760 1214 aa7.28□□□□□ -1.24
LINC00458-206ENST00000607494 TTC38Q5R3I4 469 aa7.28□□□□□ -1.24
LINC00458-206ENST00000607494 RNF219Q5W0B1 726 aaPredicted RBP7.28□□□□□ -1.24
LINC00458-206ENST00000607494 PCSK4Q6UW60 755 aa7.28□□□□□ -1.24
LINC00458-206ENST00000607494 WDR66Q8TBY9 1149 aa7.28□□□□□ -1.24
LINC00458-206ENST00000607494 PGBD4Q96DM1 585 aa7.28□□□□□ -1.24
LINC00458-206ENST00000607494 ASPSCR1Q9BZE9 553 aa7.28□□□□□ -1.24
LINC00458-206ENST00000607494 SLC5A4Q9NY91 659 aa7.28□□□□□ -1.24
LINC00458-206ENST00000607494 BRINP1O60477 761 aa7.27□□□□□ -1.25
LINC00458-206ENST00000607494 FAM20BO75063 409 aa7.27□□□□□ -1.25
LINC00458-206ENST00000607494 PEX14O75381 377 aa7.27□□□□□ -1.25
LINC00458-206ENST00000607494 FLT3P36888 993 aa7.27□□□□□ -1.25
LINC00458-206ENST00000607494 SESN2P58004 480 aaPredicted RBP7.27□□□□□ -1.25
LINC00458-206ENST00000607494 MCL1Q07820 350 aa7.27□□□□□ -1.25
LINC00458-206ENST00000607494 PPP2R5AQ15172 486 aa7.27□□□□□ -1.25
LINC00458-206ENST00000607494 CFAP100Q494V2 611 aa7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms