RNA–Protein interactions for RNA: ENST00000606557.1

SNX5-217, Transcript of sorting nexin 5, humanhuman

BASIC

Gene SNX5, Length 1,087 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX5-217ENST00000606557 CACNB1Q02641 598 aaPredicted RBP25.48■■□□□ 1.67
SNX5-217ENST00000606557 PCBP1Q15365 356 aaKnown RBP eCLIP25.48■■□□□ 1.67
SNX5-217ENST00000606557 C17orf75Q9HAS0 396 aa25.48■■□□□ 1.67
SNX5-217ENST00000606557 C1orf112Q9NSG2 853 aa25.48■■□□□ 1.67
SNX5-217ENST00000606557 ZSCAN20P17040 1043 aaPredicted RBP25.47■■□□□ 1.67
SNX5-217ENST00000606557 CMA1P23946 247 aa25.47■■□□□ 1.67
SNX5-217ENST00000606557 PEX3P56589 373 aa25.47■■□□□ 1.67
SNX5-217ENST00000606557 GIT2Q14161 759 aa25.47■■□□□ 1.67
SNX5-217ENST00000606557 AMHR2Q16671 573 aa25.47■■□□□ 1.67
SNX5-217ENST00000606557 SV2BQ7L1I2 683 aa25.47■■□□□ 1.67
SNX5-217ENST00000606557 ZBTB8OSQ8IWT0 167 aa25.47■■□□□ 1.67
SNX5-217ENST00000606557 CRIPAKQ8N1N5 446 aa25.47■■□□□ 1.67
SNX5-217ENST00000606557 DEPTORQ8TB45 409 aa25.47■■□□□ 1.67
SNX5-217ENST00000606557 IPO9Q96P70 1041 aaKnown RBP25.47■■□□□ 1.67
SNX5-217ENST00000606557 KIFC3Q9BVG8 833 aa25.47■■□□□ 1.67
SNX5-217ENST00000606557 C2orf40Q9H1Z8 148 aa25.47■■□□□ 1.67
SNX5-217ENST00000606557 CUEDC2Q9H467 287 aa25.47■■□□□ 1.67
SNX5-217ENST00000606557 CHST12Q9NRB3 414 aa25.47■■□□□ 1.67
SNX5-217ENST00000606557 PIN4Q9Y237 131 aaKnown RBP25.47■■□□□ 1.67
SNX5-217ENST00000606557 PCDHA11Q9Y5I1 949 aa25.47■■□□□ 1.67
SNX5-217ENST00000606557 SFI1A8K8P3 1242 aa25.46■■□□□ 1.67
SNX5-217ENST00000606557 C9IYK1 514 aa25.46■■□□□ 1.67
SNX5-217ENST00000606557 TSPAN1O60635 241 aa25.46■■□□□ 1.67
SNX5-217ENST00000606557 ERLIN2O94905 339 aa25.46■■□□□ 1.67
SNX5-217ENST00000606557 NPTX2P47972 431 aa25.46■■□□□ 1.67
SNX5-217ENST00000606557 SARSP49591 514 aaKnown RBP25.46■■□□□ 1.67
SNX5-217ENST00000606557 DMP1Q13316 513 aaPredicted RBP25.46■■□□□ 1.67
SNX5-217ENST00000606557 RAB30Q15771 203 aa25.46■■□□□ 1.67
SNX5-217ENST00000606557 FAM117BQ6P1L5 589 aa25.46■■□□□ 1.67
SNX5-217ENST00000606557 SLC24A5Q71RS6 500 aa25.46■■□□□ 1.67
SNX5-217ENST00000606557 IQUBQ8NA54 791 aa25.46■■□□□ 1.67
SNX5-217ENST00000606557 DHX58Q96C10 678 aa25.46■■□□□ 1.67
SNX5-217ENST00000606557 CCDC113Q9H0I3 377 aa25.46■■□□□ 1.67
SNX5-217ENST00000606557 YBX2Q9Y2T7 364 aaKnown RBP25.46■■□□□ 1.67
SNX5-217ENST00000606557 NLRC5Q86WI3 1866 aa25.46■■□□□ 1.67
SNX5-217ENST00000606557 POLR2DO15514 142 aaKnown RBP25.45■■□□□ 1.66
SNX5-217ENST00000606557 UPP2O95045 317 aa25.45■■□□□ 1.66
SNX5-217ENST00000606557 KRT18P05783 430 aaKnown RBP25.45■■□□□ 1.66
SNX5-217ENST00000606557 PLS3P13797 630 aa25.45■■□□□ 1.66
SNX5-217ENST00000606557 DNAJB2P25686 324 aa25.45■■□□□ 1.66
SNX5-217ENST00000606557 HOXA11P31270 313 aaPredicted RBP25.45■■□□□ 1.66
SNX5-217ENST00000606557 ZNF131P52739 623 aa25.45■■□□□ 1.66
SNX5-217ENST00000606557 ZBED2Q9BTP6 218 aa25.45■■□□□ 1.66
SNX5-217ENST00000606557 FZD8Q9H461 694 aa25.45■■□□□ 1.66
SNX5-217ENST00000606557 DACT1Q9NYF0 836 aa25.45■■□□□ 1.66
SNX5-217ENST00000606557 KCNH3Q9ULD8 1083 aa25.45■■□□□ 1.66
SNX5-217ENST00000606557 SZT2Q5T011 3432 aa25.44■■□□□ 1.66
SNX5-217ENST00000606557 KIAA1671Q9BY89 1806 aa25.44■■□□□ 1.66
SNX5-217ENST00000606557 A0A1W2PQ27 194 aa25.44■■□□□ 1.66
SNX5-217ENST00000606557 A0A1W2PQ64 194 aa25.44■■□□□ 1.66
SNX5-217ENST00000606557 A0A1W2PQD8 194 aa25.44■■□□□ 1.66
SNX5-217ENST00000606557 MYMKA6NI61 221 aa25.44■■□□□ 1.66
SNX5-217ENST00000606557 CCDC169A6NNP5 214 aa25.44■■□□□ 1.66
SNX5-217ENST00000606557 TLL1O43897 1013 aa25.44■■□□□ 1.66
SNX5-217ENST00000606557 MYOGP15173 224 aa25.44■■□□□ 1.66
SNX5-217ENST00000606557 PFKFB1P16118 471 aa25.44■■□□□ 1.66
SNX5-217ENST00000606557 EFNA5P52803 228 aa25.44■■□□□ 1.66
SNX5-217ENST00000606557 FAM189BP81408 668 aa25.44■■□□□ 1.66
SNX5-217ENST00000606557 HTRA4P83105 476 aaPredicted RBP25.44■■□□□ 1.66
SNX5-217ENST00000606557 FAM187BQ17R55 369 aa25.44■■□□□ 1.66
SNX5-217ENST00000606557 PPP4R3CPQ6ZMV5 832 aa25.44■■□□□ 1.66
SNX5-217ENST00000606557 NPAS4Q8IUM7 802 aa25.44■■□□□ 1.66
SNX5-217ENST00000606557 SPIRE2Q8WWL2 714 aa25.44■■□□□ 1.66
SNX5-217ENST00000606557 PRIMPOLQ96LW4 560 aa25.44■■□□□ 1.66
SNX5-217ENST00000606557 TRAIPQ9BWF2 469 aa25.44■■□□□ 1.66
SNX5-217ENST00000606557 KMT5AQ9NQR1 393 aa25.44■■□□□ 1.66
SNX5-217ENST00000606557 PRMT7Q9NVM4 692 aaPredicted RBP25.44■■□□□ 1.66
SNX5-217ENST00000606557 KBTBD4Q9NVX7 518 aa25.44■■□□□ 1.66
SNX5-217ENST00000606557 ARHGAP28Q9P2N2 729 aa25.44■■□□□ 1.66
SNX5-217ENST00000606557 MSRAQ9UJ68 235 aa25.44■■□□□ 1.66
SNX5-217ENST00000606557 HPSEQ9Y251 543 aa25.44■■□□□ 1.66
SNX5-217ENST00000606557 FAM237AA0A1B0GTK4 181 aa25.43■■□□□ 1.66
SNX5-217ENST00000606557 A0A1B0GVL5 298 aa25.43■■□□□ 1.66
SNX5-217ENST00000606557 FAM13AO94988 1023 aa25.43■■□□□ 1.66
SNX5-217ENST00000606557 AXLP30530 894 aa25.43■■□□□ 1.66
SNX5-217ENST00000606557 TWF2Q6IBS0 349 aaKnown RBP25.43■■□□□ 1.66
SNX5-217ENST00000606557 DYMQ7RTS9 669 aa25.43■■□□□ 1.66
SNX5-217ENST00000606557 DDX12PQ92771 950 aa25.43■■□□□ 1.66
SNX5-217ENST00000606557 DNAJC19Q96DA6 116 aa25.43■■□□□ 1.66
SNX5-217ENST00000606557 RAD9AQ99638 391 aa25.43■■□□□ 1.66
SNX5-217ENST00000606557 PYM1Q9BRP8 204 aaKnown RBP25.43■■□□□ 1.66
SNX5-217ENST00000606557 NTPCRQ9BSD7 190 aaKnown RBP25.43■■□□□ 1.66
SNX5-217ENST00000606557 TNMDQ9H2S6 317 aa25.43■■□□□ 1.66
SNX5-217ENST00000606557 LARSQ9P2J5 1176 aaKnown RBP25.43■■□□□ 1.66
SNX5-217ENST00000606557 CHD9Q3L8U1 2897 aa25.43■■□□□ 1.66
SNX5-217ENST00000606557 RALGAPA2Q2PPJ7 1873 aa25.43■■□□□ 1.66
SNX5-217ENST00000606557 PHLPP2Q6ZVD8 1323 aa25.42■■□□□ 1.66
SNX5-217ENST00000606557 CNTNAP2Q9UHC6 1331 aa25.42■■□□□ 1.66
SNX5-217ENST00000606557 B4GALT5O43286 388 aa25.42■■□□□ 1.66
SNX5-217ENST00000606557 TBCAO75347 108 aaKnown RBP25.42■■□□□ 1.66
SNX5-217ENST00000606557 EDN1P05305 212 aa25.42■■□□□ 1.66
SNX5-217ENST00000606557 PRKCBP05771 671 aa25.42■■□□□ 1.66
SNX5-217ENST00000606557 STAG3L1P0CL83 205 aa25.42■■□□□ 1.66
SNX5-217ENST00000606557 ARF4P18085 180 aaPredicted RBP25.42■■□□□ 1.66
SNX5-217ENST00000606557 MAPK6Q16659 721 aa25.42■■□□□ 1.66
SNX5-217ENST00000606557 GPR153Q6NV75 609 aa25.42■■□□□ 1.66
SNX5-217ENST00000606557 TIFAQ96CG3 184 aa25.42■■□□□ 1.66
SNX5-217ENST00000606557 CPB2Q96IY4 423 aa25.42■■□□□ 1.66
SNX5-217ENST00000606557 ELAC1Q9H777 363 aaKnown RBP25.42■■□□□ 1.66
SNX5-217ENST00000606557 MAGEF1Q9HAY2 307 aa25.42■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms