RNA–Protein interactions for RNA: ENST00000604599.1

CDCA3-212, Transcript of cell division cycle associated 3, humanhuman

TSL 2

Gene CDCA3, Length 2,917 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-212ENST00000604599 TXLNGQ9NUQ3 528 aa13.4□□□□□ -0.27
CDCA3-212ENST00000604599 TBK1Q9UHD2 729 aa13.4□□□□□ -0.27
CDCA3-212ENST00000604599 PCDHA2Q9Y5H9 948 aa13.4□□□□□ -0.27
CDCA3-212ENST00000604599 TMEM110-MUSTN1A8MSY1 372 aa13.39□□□□□ -0.27
CDCA3-212ENST00000604599 SP100P23497 879 aaPredicted RBP13.39□□□□□ -0.27
CDCA3-212ENST00000604599 KCNJ1P48048 391 aa13.39□□□□□ -0.27
CDCA3-212ENST00000604599 POLE2P56282 527 aa13.39□□□□□ -0.27
CDCA3-212ENST00000604599 PPATQ06203 517 aa13.39□□□□□ -0.27
CDCA3-212ENST00000604599 LAMB3Q13751 1172 aa13.39□□□□□ -0.27
CDCA3-212ENST00000604599 PDCD2Q16342 344 aaPredicted RBP13.39□□□□□ -0.27
CDCA3-212ENST00000604599 ZNF449Q6P9G9 518 aa13.39□□□□□ -0.27
CDCA3-212ENST00000604599 GPBP1Q86WP2 473 aa13.39□□□□□ -0.27
CDCA3-212ENST00000604599 KSR1Q8IVT5 923 aa13.39□□□□□ -0.27
CDCA3-212ENST00000604599 ZDHHC14Q8IZN3 488 aa13.39□□□□□ -0.27
CDCA3-212ENST00000604599 KRT35Q92764 455 aa13.39□□□□□ -0.27
CDCA3-212ENST00000604599 SIX2Q9NPC8 291 aa13.39□□□□□ -0.27
CDCA3-212ENST00000604599 KIAA1551Q9HCM1 1747 aa13.39□□□□□ -0.27
CDCA3-212ENST00000604599 TOGARAM1Q9Y4F4 1720 aa13.39□□□□□ -0.27
CDCA3-212ENST00000604599 GPR75-ASB3A0A0A6YYF3 556 aa13.39□□□□□ -0.27
CDCA3-212ENST00000604599 MARCH6O60337 910 aa13.39□□□□□ -0.27
CDCA3-212ENST00000604599 ENTPD5O75356 428 aa13.39□□□□□ -0.27
CDCA3-212ENST00000604599 NPTXRO95502 500 aa13.39□□□□□ -0.27
CDCA3-212ENST00000604599 KRT18P05783 430 aaKnown RBP13.39□□□□□ -0.27
CDCA3-212ENST00000604599 SKIV2L2P42285 1042 aaKnown RBP13.39□□□□□ -0.27
CDCA3-212ENST00000604599 GCLCP48506 637 aaPredicted RBP13.39□□□□□ -0.27
CDCA3-212ENST00000604599 TNNI2P48788 182 aa13.39□□□□□ -0.27
CDCA3-212ENST00000604599 LLGL1Q15334 1064 aa13.39□□□□□ -0.27
CDCA3-212ENST00000604599 MUM1Q2TAK8 710 aa13.39□□□□□ -0.27
CDCA3-212ENST00000604599 CCDC105Q8IYK2 499 aa13.39□□□□□ -0.27
CDCA3-212ENST00000604599 MARCH10Q8NA82 808 aaPredicted RBP13.39□□□□□ -0.27
CDCA3-212ENST00000604599 UCMAQ8WVF2 138 aa13.39□□□□□ -0.27
CDCA3-212ENST00000604599 DNAJC9Q8WXX5 260 aa13.39□□□□□ -0.27
CDCA3-212ENST00000604599 LBHD1Q9BQE6 289 aaPredicted RBP13.39□□□□□ -0.27
CDCA3-212ENST00000604599 UBA5Q9GZZ9 404 aa13.39□□□□□ -0.27
CDCA3-212ENST00000604599 THAP2Q9H0W7 228 aa13.39□□□□□ -0.27
CDCA3-212ENST00000604599 PRDM11Q9NQV5 511 aa13.39□□□□□ -0.27
CDCA3-212ENST00000604599 INTUQ9ULD6 942 aa13.39□□□□□ -0.27
CDCA3-212ENST00000604599 ASB3Q9Y575 518 aa13.39□□□□□ -0.27
CDCA3-212ENST00000604599 EDIL3O43854 480 aa13.38□□□□□ -0.27
CDCA3-212ENST00000604599 PYGLP06737 847 aa13.38□□□□□ -0.27
CDCA3-212ENST00000604599 KLRK1P26718 216 aa13.38□□□□□ -0.27
CDCA3-212ENST00000604599 EPHB2P29323 1055 aa13.38□□□□□ -0.27
CDCA3-212ENST00000604599 ALDH3A1P30838 453 aa13.38□□□□□ -0.27
CDCA3-212ENST00000604599 JAM2P57087 298 aa13.38□□□□□ -0.27
CDCA3-212ENST00000604599 EPHA7Q15375 998 aa13.38□□□□□ -0.27
CDCA3-212ENST00000604599 SBK1Q52WX2 424 aa13.38□□□□□ -0.27
CDCA3-212ENST00000604599 RNF43Q68DV7 783 aa13.38□□□□□ -0.27
CDCA3-212ENST00000604599 PAIP2Q9BPZ3 127 aaKnown RBP13.38□□□□□ -0.27
CDCA3-212ENST00000604599 TAS2R14Q9NYV8 317 aa13.38□□□□□ -0.27
CDCA3-212ENST00000604599 PARP2Q9UGN5 583 aa13.38□□□□□ -0.27
CDCA3-212ENST00000604599 COG5Q9UP83 839 aa13.38□□□□□ -0.27
CDCA3-212ENST00000604599 KIAA1024Q9UPX6 916 aa13.38□□□□□ -0.27
CDCA3-212ENST00000604599 TCRBV7S2A1N4TA0A589 114 aa13.38□□□□□ -0.27
CDCA3-212ENST00000604599 CHRNA3P32297 505 aa13.38□□□□□ -0.27
CDCA3-212ENST00000604599 PDIA5Q14554 519 aa13.38□□□□□ -0.27
CDCA3-212ENST00000604599 TSNAXIP1Q2TAA8 658 aa13.38□□□□□ -0.27
CDCA3-212ENST00000604599 COA7Q96BR5 231 aa13.38□□□□□ -0.27
CDCA3-212ENST00000604599 FAM84BQ96KN1 310 aaPredicted RBP13.38□□□□□ -0.27
CDCA3-212ENST00000604599 POP1Q99575 1024 aaKnown RBP13.38□□□□□ -0.27
CDCA3-212ENST00000604599 TRIM4Q9C037 500 aa13.38□□□□□ -0.27
CDCA3-212ENST00000604599 LRMDAQ9H2I8 198 aa13.38□□□□□ -0.27
CDCA3-212ENST00000604599 USP40Q9NVE5 1235 aa13.38□□□□□ -0.27
CDCA3-212ENST00000604599 DIS3Q9Y2L1 958 aaKnown RBP13.38□□□□□ -0.27
CDCA3-212ENST00000604599 NCANO14594 1321 aa13.38□□□□□ -0.27
CDCA3-212ENST00000604599 LGR5O75473 907 aa13.37□□□□□ -0.27
CDCA3-212ENST00000604599 AKAP3O75969 853 aa13.37□□□□□ -0.27
CDCA3-212ENST00000604599 TMEM253P0C7T8 217 aa13.37□□□□□ -0.27
CDCA3-212ENST00000604599 CNGA1P29973 690 aa13.37□□□□□ -0.27
CDCA3-212ENST00000604599 STAT1P42224 750 aa13.37□□□□□ -0.27
CDCA3-212ENST00000604599 RRP1BQ14684 758 aaKnown RBP13.37□□□□□ -0.27
CDCA3-212ENST00000604599 PALB2Q86YC2 1186 aa13.37□□□□□ -0.27
CDCA3-212ENST00000604599 PHC3Q8NDX5 983 aa13.37□□□□□ -0.27
CDCA3-212ENST00000604599 ASAP3Q8TDY4 903 aa13.37□□□□□ -0.27
CDCA3-212ENST00000604599 RUNDC3BQ96NL0 473 aa13.37□□□□□ -0.27
CDCA3-212ENST00000604599 SPZ1Q9BXG8 430 aa13.37□□□□□ -0.27
CDCA3-212ENST00000604599 PITPNM3Q9BZ71 974 aa13.37□□□□□ -0.27
CDCA3-212ENST00000604599 KIAA1683Q9H0B3 1180 aa13.37□□□□□ -0.27
CDCA3-212ENST00000604599 WDR35Q9P2L0 1181 aa13.37□□□□□ -0.27
CDCA3-212ENST00000604599 CHORDC1Q9UHD1 332 aaPredicted RBP13.37□□□□□ -0.27
CDCA3-212ENST00000604599 PCDHA3Q9Y5H8 950 aa13.37□□□□□ -0.27
CDCA3-212ENST00000604599 POTEB3A0JP26 581 aa13.37□□□□□ -0.27
CDCA3-212ENST00000604599 POTECB2RU33 542 aa13.37□□□□□ -0.27
CDCA3-212ENST00000604599 PODXLO00592 558 aa13.37□□□□□ -0.27
CDCA3-212ENST00000604599 PLA2G4BP0C869 781 aa13.37□□□□□ -0.27
CDCA3-212ENST00000604599 CASP4P49662 377 aa13.37□□□□□ -0.27
CDCA3-212ENST00000604599 CTTNQ14247 550 aaKnown RBP13.37□□□□□ -0.27
CDCA3-212ENST00000604599 LBRQ14739 615 aaKnown RBP13.37□□□□□ -0.27
CDCA3-212ENST00000604599 SETDB1Q15047 1291 aa13.37□□□□□ -0.27
CDCA3-212ENST00000604599 MTFR1Q15390 333 aa13.37□□□□□ -0.27
CDCA3-212ENST00000604599 EDRF1Q3B7T1 1238 aa13.37□□□□□ -0.27
CDCA3-212ENST00000604599 POTEBQ6S5H4 581 aa13.37□□□□□ -0.27
CDCA3-212ENST00000604599 MTHFD1LQ6UB35 978 aa13.37□□□□□ -0.27
CDCA3-212ENST00000604599 SRRM1Q8IYB3 904 aaKnown RBP13.37□□□□□ -0.27
CDCA3-212ENST00000604599 ZNF444Q8N0Y2 327 aaPredicted RBP13.37□□□□□ -0.27
CDCA3-212ENST00000604599 OLIG1Q8TAK6 271 aa13.37□□□□□ -0.27
CDCA3-212ENST00000604599 EPAS1Q99814 870 aa13.37□□□□□ -0.27
CDCA3-212ENST00000604599 PPP1R12CQ9BZL4 782 aa13.37□□□□□ -0.27
CDCA3-212ENST00000604599 SYNGAP1Q96PV0 1343 aa13.37□□□□□ -0.27
CDCA3-212ENST00000604599 TAF1P21675 1872 aa13.37□□□□□ -0.27
CDCA3-212ENST00000604599 SGSM1Q2NKQ1 1148 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms