RNA–Protein interactions for RNA: ENST00000602898.1

SPTBN1-206, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 1 (best)

Gene SPTBN1, Length 2,942 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-206ENST00000602898 RHDQ02161 417 aa5.47□□□□□ -1.53
SPTBN1-206ENST00000602898 ZBTB17Q13105 803 aa5.47□□□□□ -1.53
SPTBN1-206ENST00000602898 LAPTM5Q13571 262 aa5.47□□□□□ -1.53
SPTBN1-206ENST00000602898 KRT32Q14532 448 aa5.47□□□□□ -1.53
SPTBN1-206ENST00000602898 SLC22A25Q6T423 547 aa5.47□□□□□ -1.53
SPTBN1-206ENST00000602898 KDELC1Q6UW63 502 aa5.47□□□□□ -1.53
SPTBN1-206ENST00000602898 LRRC69Q6ZNQ3 347 aa5.47□□□□□ -1.53
SPTBN1-206ENST00000602898 SEPT14Q6ZU15 432 aa5.47□□□□□ -1.53
SPTBN1-206ENST00000602898 BEND5Q7L4P6 421 aa5.47□□□□□ -1.53
SPTBN1-206ENST00000602898 FAM9CQ8IZT9 166 aa5.47□□□□□ -1.53
SPTBN1-206ENST00000602898 CHST13Q8NET6 341 aa5.47□□□□□ -1.53
SPTBN1-206ENST00000602898 SLC35B4Q969S0 331 aa5.47□□□□□ -1.53
SPTBN1-206ENST00000602898 RUNDC3BQ96NL0 473 aa5.47□□□□□ -1.53
SPTBN1-206ENST00000602898 MAK16Q9BXY0 300 aaKnown RBP5.47□□□□□ -1.53
SPTBN1-206ENST00000602898 DISC1Q9NRI5 854 aa5.47□□□□□ -1.53
SPTBN1-206ENST00000602898 RTEL1Q9NZ71 1219 aa5.47□□□□□ -1.53
SPTBN1-206ENST00000602898 TBC1D29Q9UFV1 150 aa5.47□□□□□ -1.53
SPTBN1-206ENST00000602898 ZSCAN21Q9Y5A6 473 aaPredicted RBP5.47□□□□□ -1.53
SPTBN1-206ENST00000602898 ZNF521Q96K83 1311 aa5.47□□□□□ -1.53
SPTBN1-206ENST00000602898 ATXN2Q99700 1313 aaKnown RBP5.47□□□□□ -1.53
SPTBN1-206ENST00000602898 MBD5Q9P267 1494 aa5.46□□□□□ -1.53
SPTBN1-206ENST00000602898 ASXL1Q8IXJ9 1541 aa5.46□□□□□ -1.53
SPTBN1-206ENST00000602898 PIK3C2BO00750 1634 aa5.46□□□□□ -1.54
SPTBN1-206ENST00000602898 SLC12A8A0AV02 714 aa5.46□□□□□ -1.54
SPTBN1-206ENST00000602898 FRS3O43559 492 aa5.46□□□□□ -1.54
SPTBN1-206ENST00000602898 ADCY3O60266 1144 aa5.46□□□□□ -1.54
SPTBN1-206ENST00000602898 CTNND1O60716 968 aaKnown RBP5.46□□□□□ -1.54
SPTBN1-206ENST00000602898 SOCS5O75159 536 aa5.46□□□□□ -1.54
SPTBN1-206ENST00000602898 ZIC2O95409 532 aaPredicted RBP5.46□□□□□ -1.54
SPTBN1-206ENST00000602898 KRT9P35527 623 aa5.46□□□□□ -1.54
SPTBN1-206ENST00000602898 PRIM2P49643 509 aa5.46□□□□□ -1.54
SPTBN1-206ENST00000602898 DCAF7P61962 342 aa5.46□□□□□ -1.54
SPTBN1-206ENST00000602898 SPARCL1Q14515 664 aa5.46□□□□□ -1.54
SPTBN1-206ENST00000602898 LBRQ14739 615 aaKnown RBP5.46□□□□□ -1.54
SPTBN1-206ENST00000602898 CEP135Q66GS9 1140 aa5.46□□□□□ -1.54
SPTBN1-206ENST00000602898 MCTP1Q6DN14 999 aa5.46□□□□□ -1.54
SPTBN1-206ENST00000602898 RAB12Q6IQ22 244 aa5.46□□□□□ -1.54
SPTBN1-206ENST00000602898 SLC30A6Q6NXT4 461 aa5.46□□□□□ -1.54
SPTBN1-206ENST00000602898 SLC30A9Q6PML9 568 aa5.46□□□□□ -1.54
SPTBN1-206ENST00000602898 C4orf50Q6ZRC1 276 aa5.46□□□□□ -1.54
SPTBN1-206ENST00000602898 NECAB2Q7Z6G3 386 aa5.46□□□□□ -1.54
SPTBN1-206ENST00000602898 CMIPQ8IY22 773 aa5.46□□□□□ -1.54
SPTBN1-206ENST00000602898 SLC7A5P1Q8MH63 180 aa5.46□□□□□ -1.54
SPTBN1-206ENST00000602898 CCDC150Q8NCX0 1101 aa5.46□□□□□ -1.54
SPTBN1-206ENST00000602898 SLC16A10Q8TF71 515 aa5.46□□□□□ -1.54
SPTBN1-206ENST00000602898 ZFAND2BQ8WV99 257 aa5.46□□□□□ -1.54
SPTBN1-206ENST00000602898 GPKOWQ92917 476 aaPredicted RBP eCLIP5.46□□□□□ -1.54
SPTBN1-206ENST00000602898 ALS2CR12Q96Q35 445 aa5.46□□□□□ -1.54
SPTBN1-206ENST00000602898 DDX23Q9BUQ8 820 aaKnown RBP5.46□□□□□ -1.54
SPTBN1-206ENST00000602898 NIFKQ9BYG3 293 aaKnown RBP5.46□□□□□ -1.54
SPTBN1-206ENST00000602898 GLT8D2Q9H1C3 349 aa5.46□□□□□ -1.54
SPTBN1-206ENST00000602898 VPS11Q9H270 941 aa5.46□□□□□ -1.54
SPTBN1-206ENST00000602898 FAM184BQ9ULE4 1060 aa5.46□□□□□ -1.54
SPTBN1-206ENST00000602898 TMEM131LA2VDJ0 1609 aa5.46□□□□□ -1.54
SPTBN1-206ENST00000602898 A0A1W2PPH5 198 aa5.46□□□□□ -1.54
SPTBN1-206ENST00000602898 TLR3O15455 904 aaKnown RBP5.46□□□□□ -1.54
SPTBN1-206ENST00000602898 NCK2O43639 380 aa5.46□□□□□ -1.54
SPTBN1-206ENST00000602898 BCAR3O75815 825 aa5.46□□□□□ -1.54
SPTBN1-206ENST00000602898 GRK6P43250 576 aa5.46□□□□□ -1.54
SPTBN1-206ENST00000602898 ARFIP1P53367 373 aa5.46□□□□□ -1.54
SPTBN1-206ENST00000602898 WNT7BP56706 349 aa5.46□□□□□ -1.54
SPTBN1-206ENST00000602898 HTRA3P83110 453 aa5.46□□□□□ -1.54
SPTBN1-206ENST00000602898 CDC16Q13042 620 aa5.46□□□□□ -1.54
SPTBN1-206ENST00000602898 PDE3AQ14432 1141 aa5.46□□□□□ -1.54
SPTBN1-206ENST00000602898 CCDC38Q502W7 563 aa5.46□□□□□ -1.54
SPTBN1-206ENST00000602898 TLDC1Q6P9B6 456 aa5.46□□□□□ -1.54
SPTBN1-206ENST00000602898 NLRP8Q86W28 1048 aa5.46□□□□□ -1.54
SPTBN1-206ENST00000602898 MAGEC3Q8TD91 643 aa5.46□□□□□ -1.54
SPTBN1-206ENST00000602898 RILPL2Q969X0 211 aa5.46□□□□□ -1.54
SPTBN1-206ENST00000602898 SPDL1Q96EA4 605 aa5.46□□□□□ -1.54
SPTBN1-206ENST00000602898 NGLY1Q96IV0 654 aa5.46□□□□□ -1.54
SPTBN1-206ENST00000602898 RBM41Q96IZ5 413 aaKnown RBP5.46□□□□□ -1.54
SPTBN1-206ENST00000602898 EXOC2Q96KP1 924 aa5.46□□□□□ -1.54
SPTBN1-206ENST00000602898 NT5C1BQ96P26 610 aa5.46□□□□□ -1.54
SPTBN1-206ENST00000602898 CSRNP1Q96S65 589 aa5.46□□□□□ -1.54
SPTBN1-206ENST00000602898 ACAT2Q9BWD1 397 aa5.46□□□□□ -1.54
SPTBN1-206ENST00000602898 EHMT1Q9H9B1 1298 aa5.46□□□□□ -1.54
SPTBN1-206ENST00000602898 HDAC6Q9UBN7 1215 aa5.46□□□□□ -1.54
SPTBN1-206ENST00000602898 GRHPRQ9UBQ7 328 aa5.46□□□□□ -1.54
SPTBN1-206ENST00000602898 LRFN2Q9ULH4 789 aa5.46□□□□□ -1.54
SPTBN1-206ENST00000602898 PCDHGB4Q9UN71 923 aa5.46□□□□□ -1.54
SPTBN1-206ENST00000602898 TRPM2O94759 1503 aa5.46□□□□□ -1.54
SPTBN1-206ENST00000602898 KIF1AQ12756 1690 aa5.45□□□□□ -1.54
SPTBN1-206ENST00000602898 LACTBL1A8MY62 500 aa5.45□□□□□ -1.54
SPTBN1-206ENST00000602898 B4DLN1 442 aa5.45□□□□□ -1.54
SPTBN1-206ENST00000602898 M0R2C6 588 aa5.45□□□□□ -1.54
SPTBN1-206ENST00000602898 KPNA5O15131 536 aa5.45□□□□□ -1.54
SPTBN1-206ENST00000602898 CEP104O60308 925 aa5.45□□□□□ -1.54
SPTBN1-206ENST00000602898 CLASP2O75122 1294 aaKnown RBP5.45□□□□□ -1.54
SPTBN1-206ENST00000602898 SIN3BO75182 1162 aa5.45□□□□□ -1.54
SPTBN1-206ENST00000602898 POU2F2P09086 479 aa5.45□□□□□ -1.54
SPTBN1-206ENST00000602898 THEGLP0DJG4 465 aa5.45□□□□□ -1.54
SPTBN1-206ENST00000602898 ZSCAN22P10073 491 aaPredicted RBP5.45□□□□□ -1.54
SPTBN1-206ENST00000602898 DNAJB1P25685 340 aa5.45□□□□□ -1.54
SPTBN1-206ENST00000602898 IDUAP35475 653 aa5.45□□□□□ -1.54
SPTBN1-206ENST00000602898 HNF4AP41235 474 aa5.45□□□□□ -1.54
SPTBN1-206ENST00000602898 HDAC4P56524 1084 aa5.45□□□□□ -1.54
SPTBN1-206ENST00000602898 BEX3Q00994 111 aa5.45□□□□□ -1.54
SPTBN1-206ENST00000602898 ITIH3Q06033 890 aa5.45□□□□□ -1.54
SPTBN1-206ENST00000602898 ARHGEF6Q15052 776 aa5.45□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms