RNA–Protein interactions for RNA: ENST00000600804.1

CHMP2A-207, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 2

Gene CHMP2A, Length 592 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-207ENST00000600804 A0A087WWV3 80 aa12.89□□□□□ -0.35
CHMP2A-207ENST00000600804 PVALEFA0A1B0GWK0 134 aa12.89□□□□□ -0.35
CHMP2A-207ENST00000600804 SCP2P22307 547 aa12.89□□□□□ -0.35
CHMP2A-207ENST00000600804 TMOD1P28289 359 aa12.89□□□□□ -0.35
CHMP2A-207ENST00000600804 HOXD11P31277 338 aaPredicted RBP12.89□□□□□ -0.35
CHMP2A-207ENST00000600804 ARL2P36404 184 aa12.89□□□□□ -0.35
CHMP2A-207ENST00000600804 DNM2P50570 870 aa12.89□□□□□ -0.35
CHMP2A-207ENST00000600804 POU5F1BQ06416 359 aa12.89□□□□□ -0.35
CHMP2A-207ENST00000600804 PTK7Q13308 1070 aa12.89□□□□□ -0.35
CHMP2A-207ENST00000600804 MKRN4PQ13434 485 aaPredicted RBP12.89□□□□□ -0.35
CHMP2A-207ENST00000600804 GIT2Q14161 759 aa12.89□□□□□ -0.35
CHMP2A-207ENST00000600804 HIC1Q14526 733 aa12.89□□□□□ -0.35
CHMP2A-207ENST00000600804 MXD4Q14582 209 aaPredicted RBP12.89□□□□□ -0.35
CHMP2A-207ENST00000600804 POSTNQ15063 836 aa12.89□□□□□ -0.35
CHMP2A-207ENST00000600804 FAM47CQ5HY64 1035 aa12.89□□□□□ -0.35
CHMP2A-207ENST00000600804 NT5DC1Q5TFE4 455 aa12.89□□□□□ -0.35
CHMP2A-207ENST00000600804 DHX38Q92620 1227 aaKnown RBP12.89□□□□□ -0.35
CHMP2A-207ENST00000600804 DRC1Q96MC2 740 aa12.89□□□□□ -0.35
CHMP2A-207ENST00000600804 SEL1LQ9UBV2 794 aa12.89□□□□□ -0.35
CHMP2A-207ENST00000600804 KIAA1671Q9BY89 1806 aa12.89□□□□□ -0.35
CHMP2A-207ENST00000600804 PITPNM1O00562 1244 aa12.88□□□□□ -0.35
CHMP2A-207ENST00000600804 TREHO43280 583 aa12.88□□□□□ -0.35
CHMP2A-207ENST00000600804 USO1O60763 962 aaKnown RBP12.88□□□□□ -0.35
CHMP2A-207ENST00000600804 SSBP05455 408 aaKnown RBP eCLIP12.88□□□□□ -0.35
CHMP2A-207ENST00000600804 MAPTP10636 758 aaKnown RBP12.88□□□□□ -0.35
CHMP2A-207ENST00000600804 GAP43P17677 238 aa12.88□□□□□ -0.35
CHMP2A-207ENST00000600804 RFC2P35250 354 aa12.88□□□□□ -0.35
CHMP2A-207ENST00000600804 DEFB103AP81534 67 aa12.88□□□□□ -0.35
CHMP2A-207ENST00000600804 EHHADHQ08426 723 aa12.88□□□□□ -0.35
CHMP2A-207ENST00000600804 DPYDQ12882 1025 aa12.88□□□□□ -0.35
CHMP2A-207ENST00000600804 MAPK7Q13164 816 aa12.88□□□□□ -0.35
CHMP2A-207ENST00000600804 SKIV2LQ15477 1246 aaKnown RBP12.88□□□□□ -0.35
CHMP2A-207ENST00000600804 PTGISQ16647 500 aa12.88□□□□□ -0.35
CHMP2A-207ENST00000600804 EFCAB12Q6NXP0 572 aa12.88□□□□□ -0.35
CHMP2A-207ENST00000600804 RBM43Q6ZSC3 357 aaKnown RBP12.88□□□□□ -0.35
CHMP2A-207ENST00000600804 UNC13DQ70J99 1090 aa12.88□□□□□ -0.35
CHMP2A-207ENST00000600804 TRMT1LQ7Z2T5 733 aaKnown RBP12.88□□□□□ -0.35
CHMP2A-207ENST00000600804 KIAA0319LQ8IZA0 1049 aa12.88□□□□□ -0.35
CHMP2A-207ENST00000600804 DAW1Q8N136 415 aa12.88□□□□□ -0.35
CHMP2A-207ENST00000600804 PHOSPHO2Q8TCD6 241 aa12.88□□□□□ -0.35
CHMP2A-207ENST00000600804 TRAPPC12Q8WVT3 735 aa12.88□□□□□ -0.35
CHMP2A-207ENST00000600804 PSPC1Q8WXF1 523 aaKnown RBP12.88□□□□□ -0.35
CHMP2A-207ENST00000600804 FAM122AQ96E09 287 aa12.88□□□□□ -0.35
CHMP2A-207ENST00000600804 SH2D3AQ9BRG2 576 aa12.88□□□□□ -0.35
CHMP2A-207ENST00000600804 REEP2Q9BRK0 252 aa12.88□□□□□ -0.35
CHMP2A-207ENST00000600804 NTPCRQ9BSD7 190 aaKnown RBP12.88□□□□□ -0.35
CHMP2A-207ENST00000600804 NFKBIZQ9BYH8 718 aa12.88□□□□□ -0.35
CHMP2A-207ENST00000600804 GTPBP4Q9BZE4 634 aaKnown RBP12.88□□□□□ -0.35
CHMP2A-207ENST00000600804 TSPYL2Q9H2G4 693 aaPredicted RBP12.88□□□□□ -0.35
CHMP2A-207ENST00000600804 COL4A3BPQ9Y5P4 624 aa12.88□□□□□ -0.35
CHMP2A-207ENST00000600804 ZNF318Q5VUA4 2279 aa12.87□□□□□ -0.35
CHMP2A-207ENST00000600804 ABCD1P33897 745 aa12.87□□□□□ -0.35
CHMP2A-207ENST00000600804 AFMP43652 599 aa12.87□□□□□ -0.35
CHMP2A-207ENST00000600804 SARSP49591 514 aaKnown RBP12.87□□□□□ -0.35
CHMP2A-207ENST00000600804 WDR5P61964 334 aaKnown RBP12.87□□□□□ -0.35
CHMP2A-207ENST00000600804 IGBP1P78318 339 aa12.87□□□□□ -0.35
CHMP2A-207ENST00000600804 CUL4BQ13620 913 aa12.87□□□□□ -0.35
CHMP2A-207ENST00000600804 KCNB1Q14721 858 aa12.87□□□□□ -0.35
CHMP2A-207ENST00000600804 PPP2R5AQ15172 486 aa12.87□□□□□ -0.35
CHMP2A-207ENST00000600804 FAM43BQ6ZT52 329 aaPredicted RBP12.87□□□□□ -0.35
CHMP2A-207ENST00000600804 IFNLR1Q8IU57 520 aaPredicted RBP12.87□□□□□ -0.35
CHMP2A-207ENST00000600804 CCDC65Q8IXS2 484 aa12.87□□□□□ -0.35
CHMP2A-207ENST00000600804 CAGE1Q8TC20 777 aa12.87□□□□□ -0.35
CHMP2A-207ENST00000600804 GDPD5Q8WTR4 605 aa12.87□□□□□ -0.35
CHMP2A-207ENST00000600804 SPIRE2Q8WWL2 714 aa12.87□□□□□ -0.35
CHMP2A-207ENST00000600804 SYAP1Q96A49 352 aaPredicted RBP12.87□□□□□ -0.35
CHMP2A-207ENST00000600804 GSDMAQ96QA5 445 aa12.87□□□□□ -0.35
CHMP2A-207ENST00000600804 MAP7D2Q96T17 732 aa12.87□□□□□ -0.35
CHMP2A-207ENST00000600804 NUP62CLQ9H1M0 184 aa12.87□□□□□ -0.35
CHMP2A-207ENST00000600804 PARVGQ9HBI0 331 aa12.87□□□□□ -0.35
CHMP2A-207ENST00000600804 OLFML3Q9NRN5 406 aa12.87□□□□□ -0.35
CHMP2A-207ENST00000600804 KLRC4O43908 158 aa12.86□□□□□ -0.35
CHMP2A-207ENST00000600804 HIP1RO75146 1068 aa12.86□□□□□ -0.35
CHMP2A-207ENST00000600804 TBCAO75347 108 aaKnown RBP12.86□□□□□ -0.35
CHMP2A-207ENST00000600804 SMC2O95347 1197 aa12.86□□□□□ -0.35
CHMP2A-207ENST00000600804 KRT18P05783 430 aaKnown RBP12.86□□□□□ -0.35
CHMP2A-207ENST00000600804 ACTN1P12814 892 aa12.86□□□□□ -0.35
CHMP2A-207ENST00000600804 PLS3P13797 630 aa12.86□□□□□ -0.35
CHMP2A-207ENST00000600804 NAMPTP43490 491 aa12.86□□□□□ -0.35
CHMP2A-207ENST00000600804 CLCN3P51790 818 aa12.86□□□□□ -0.35
CHMP2A-207ENST00000600804 CHMP4BP1P59074 171 aa12.86□□□□□ -0.35
CHMP2A-207ENST00000600804 ZNF200P98182 395 aaPredicted RBP12.86□□□□□ -0.35
CHMP2A-207ENST00000600804 DHX8Q14562 1220 aaKnown RBP12.86□□□□□ -0.35
CHMP2A-207ENST00000600804 TRIM71Q2Q1W2 868 aaKnown RBP12.86□□□□□ -0.35
CHMP2A-207ENST00000600804 TPRNQ4KMQ1 711 aa12.86□□□□□ -0.35
CHMP2A-207ENST00000600804 FAM26DQ5JW98 314 aa12.86□□□□□ -0.35
CHMP2A-207ENST00000600804 CCDC183Q5T5S1 534 aa12.86□□□□□ -0.35
CHMP2A-207ENST00000600804 FAM102BQ5T8I3 360 aa12.86□□□□□ -0.35
CHMP2A-207ENST00000600804 TRAF7Q6Q0C0 670 aa12.86□□□□□ -0.35
CHMP2A-207ENST00000600804 RSPH3Q86UC2 560 aa12.86□□□□□ -0.35
CHMP2A-207ENST00000600804 ZNF410Q86VK4 478 aa12.86□□□□□ -0.35
CHMP2A-207ENST00000600804 METTL13Q8N6R0 699 aa12.86□□□□□ -0.35
CHMP2A-207ENST00000600804 WNT8BQ93098 351 aa12.86□□□□□ -0.35
CHMP2A-207ENST00000600804 C1QTNF1Q9BXJ1 281 aa12.86□□□□□ -0.35
CHMP2A-207ENST00000600804 POLR3FQ9H1D9 316 aaPredicted RBP12.86□□□□□ -0.35
CHMP2A-207ENST00000600804 ST6GALNAC4Q9H4F1 302 aa12.86□□□□□ -0.35
CHMP2A-207ENST00000600804 SUGCTQ9HAC7 445 aa12.86□□□□□ -0.35
CHMP2A-207ENST00000600804 KIAA1468Q9P260 1216 aa12.86□□□□□ -0.35
CHMP2A-207ENST00000600804 LARSQ9P2J5 1176 aaKnown RBP12.86□□□□□ -0.35
CHMP2A-207ENST00000600804 SUCLA2Q9P2R7 463 aaPredicted RBP12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms