RNA–Protein interactions for RNA: ENST00000600628.2

SSBP4-208, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 3

Gene SSBP4, Length 550 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-208ENST00000600628 FZD8Q9H461 694 aa9.77□□□□□ -0.85
SSBP4-208ENST00000600628 RNF216Q9NWF9 866 aaPredicted RBP9.77□□□□□ -0.85
SSBP4-208ENST00000600628 MTUS1Q9ULD2 1270 aa9.77□□□□□ -0.85
SSBP4-208ENST00000600628 DENND3A2RUS2 1198 aa9.76□□□□□ -0.85
SSBP4-208ENST00000600628 TSPAN1O60635 241 aa9.76□□□□□ -0.85
SSBP4-208ENST00000600628 STAG3L1P0CL83 205 aa9.76□□□□□ -0.85
SSBP4-208ENST00000600628 LONP1P36776 959 aaKnown RBP9.76□□□□□ -0.85
SSBP4-208ENST00000600628 GATMP50440 423 aa9.76□□□□□ -0.85
SSBP4-208ENST00000600628 SLC12A3P55017 1021 aa9.76□□□□□ -0.85
SSBP4-208ENST00000600628 SF3A1Q15459 793 aaKnown RBP9.76□□□□□ -0.85
SSBP4-208ENST00000600628 NAALADL2Q58DX5 795 aa9.76□□□□□ -0.85
SSBP4-208ENST00000600628 FAM173BQ6P4H8 233 aa9.76□□□□□ -0.85
SSBP4-208ENST00000600628 LRRC55Q6ZSA7 311 aa9.76□□□□□ -0.85
SSBP4-208ENST00000600628 FIBCD1Q8N539 461 aa9.76□□□□□ -0.85
SSBP4-208ENST00000600628 SNX29Q8TEQ0 813 aa9.76□□□□□ -0.85
SSBP4-208ENST00000600628 NTPCRQ9BSD7 190 aaKnown RBP9.76□□□□□ -0.85
SSBP4-208ENST00000600628 CCSER1Q9C0I3 900 aa9.76□□□□□ -0.85
SSBP4-208ENST00000600628 BHMT2Q9H2M3 363 aa9.76□□□□□ -0.85
SSBP4-208ENST00000600628 ZSCAN16Q9H4T2 348 aaPredicted RBP9.76□□□□□ -0.85
SSBP4-208ENST00000600628 CWH43Q9H720 699 aa9.76□□□□□ -0.85
SSBP4-208ENST00000600628 GPRC5CQ9NQ84 441 aa9.76□□□□□ -0.85
SSBP4-208ENST00000600628 PRDM6Q9NQX0 595 aa9.76□□□□□ -0.85
SSBP4-208ENST00000600628 BLOC1S4Q9NUP1 217 aa9.76□□□□□ -0.85
SSBP4-208ENST00000600628 DDX19AQ9NUU7 478 aaKnown RBP9.76□□□□□ -0.85
SSBP4-208ENST00000600628 DACT1Q9NYF0 836 aa9.76□□□□□ -0.85
SSBP4-208ENST00000600628 DAXXQ9UER7 740 aaPredicted RBP9.76□□□□□ -0.85
SSBP4-208ENST00000600628 FBXO2Q9UK22 296 aaPredicted RBP9.76□□□□□ -0.85
SSBP4-208ENST00000600628 KIAA1024Q9UPX6 916 aa9.76□□□□□ -0.85
SSBP4-208ENST00000600628 RWDD3Q9Y3V2 267 aa9.76□□□□□ -0.85
SSBP4-208ENST00000600628 SRPRBQ9Y5M8 271 aaKnown RBP9.76□□□□□ -0.85
SSBP4-208ENST00000600628 CLIC4Q9Y696 253 aa9.76□□□□□ -0.85
SSBP4-208ENST00000600628 MRPL42Q9Y6G3 142 aaKnown RBP9.76□□□□□ -0.85
SSBP4-208ENST00000600628 TCHHQ07283 1943 aa9.76□□□□□ -0.85
SSBP4-208ENST00000600628 ZMYM2Q9UBW7 1377 aa9.75□□□□□ -0.85
SSBP4-208ENST00000600628 TRIP11Q15643 1979 aa9.75□□□□□ -0.85
SSBP4-208ENST00000600628 A0A1B0GUA9 196 aa9.75□□□□□ -0.85
SSBP4-208ENST00000600628 VPS37CA5D8V6 355 aaPredicted RBP9.75□□□□□ -0.85
SSBP4-208ENST00000600628 VWA3AA6NCI4 1184 aa9.75□□□□□ -0.85
SSBP4-208ENST00000600628 MEIS3P2A8K0S8 358 aa9.75□□□□□ -0.85
SSBP4-208ENST00000600628 E9PMD0 336 aa9.75□□□□□ -0.85
SSBP4-208ENST00000600628 DLL1O00548 723 aa9.75□□□□□ -0.85
SSBP4-208ENST00000600628 USO1O60763 962 aaKnown RBP9.75□□□□□ -0.85
SSBP4-208ENST00000600628 EDN1P05305 212 aa9.75□□□□□ -0.85
SSBP4-208ENST00000600628 SRGAP2CP0DJJ0 459 aa9.75□□□□□ -0.85
SSBP4-208ENST00000600628 GUCY2CP25092 1073 aa9.75□□□□□ -0.85
SSBP4-208ENST00000600628 AXLP30530 894 aa9.75□□□□□ -0.85
SSBP4-208ENST00000600628 BTG3Q14201 252 aaPredicted RBP9.75□□□□□ -0.85
SSBP4-208ENST00000600628 SLC39A14Q15043 492 aa9.75□□□□□ -0.85
SSBP4-208ENST00000600628 ARSHQ5FYA8 562 aa9.75□□□□□ -0.85
SSBP4-208ENST00000600628 KRT79Q5XKE5 535 aa9.75□□□□□ -0.85
SSBP4-208ENST00000600628 RINT1Q6NUQ1 792 aa9.75□□□□□ -0.85
SSBP4-208ENST00000600628 AGMOQ6ZNB7 445 aa9.75□□□□□ -0.85
SSBP4-208ENST00000600628 SYT2Q8N9I0 419 aaPredicted RBP9.75□□□□□ -0.85
SSBP4-208ENST00000600628 SMG8Q8ND04 991 aaKnown RBP9.75□□□□□ -0.85
SSBP4-208ENST00000600628 FBXO22Q8NEZ5 403 aa9.75□□□□□ -0.85
SSBP4-208ENST00000600628 GDPD5Q8WTR4 605 aa9.75□□□□□ -0.85
SSBP4-208ENST00000600628 MRPL38Q96DV4 380 aaKnown RBP9.75□□□□□ -0.85
SSBP4-208ENST00000600628 PRIMPOLQ96LW4 560 aa9.75□□□□□ -0.85
SSBP4-208ENST00000600628 NLRP4Q96MN2 994 aa9.75□□□□□ -0.85
SSBP4-208ENST00000600628 TMEM117Q9H0C3 514 aa9.75□□□□□ -0.85
SSBP4-208ENST00000600628 NT5C3AQ9H0P0 336 aa9.75□□□□□ -0.85
SSBP4-208ENST00000600628 POLR3FQ9H1D9 316 aaPredicted RBP9.75□□□□□ -0.85
SSBP4-208ENST00000600628 FAM105AQ9NUU6 356 aa9.75□□□□□ -0.85
SSBP4-208ENST00000600628 KCND2Q9NZV8 630 aa9.75□□□□□ -0.85
SSBP4-208ENST00000600628 DNM3Q9UQ16 869 aa9.75□□□□□ -0.85
SSBP4-208ENST00000600628 PCDHB7Q9Y5E2 793 aa9.75□□□□□ -0.85
SSBP4-208ENST00000600628 TTLL13PA6NNM8 815 aa9.74□□□□□ -0.85
SSBP4-208ENST00000600628 HOXA2O43364 376 aa9.74□□□□□ -0.85
SSBP4-208ENST00000600628 EFEMP2O95967 443 aa9.74□□□□□ -0.85
SSBP4-208ENST00000600628 FGFR1P11362 822 aa9.74□□□□□ -0.85
SSBP4-208ENST00000600628 ZSCAN20P17040 1043 aaPredicted RBP9.74□□□□□ -0.85
SSBP4-208ENST00000600628 ARF4P18085 180 aaPredicted RBP9.74□□□□□ -0.85
SSBP4-208ENST00000600628 NCLP19338 710 aaKnown RBP9.74□□□□□ -0.85
SSBP4-208ENST00000600628 NAMPTP43490 491 aa9.74□□□□□ -0.85
SSBP4-208ENST00000600628 RAB27AP51159 221 aa9.74□□□□□ -0.85
SSBP4-208ENST00000600628 ZNF131P52739 623 aa9.74□□□□□ -0.85
SSBP4-208ENST00000600628 TFDP1Q14186 410 aa9.74□□□□□ -0.85
SSBP4-208ENST00000600628 USP49Q70CQ1 688 aa9.74□□□□□ -0.85
SSBP4-208ENST00000600628 TAS1R3Q7RTX0 852 aa9.74□□□□□ -0.85
SSBP4-208ENST00000600628 CATSPER4Q7RTX7 472 aa9.74□□□□□ -0.85
SSBP4-208ENST00000600628 MICALL1Q8N3F8 863 aa9.74□□□□□ -0.85
SSBP4-208ENST00000600628 LINC00301Q8NCQ3 95 aa9.74□□□□□ -0.85
SSBP4-208ENST00000600628 SPPL3Q8TCT6 385 aa9.74□□□□□ -0.85
SSBP4-208ENST00000600628 ATXN2LQ8WWM7 1075 aaKnown RBP9.74□□□□□ -0.85
SSBP4-208ENST00000600628 KIFAP3Q92845 792 aa9.74□□□□□ -0.85
SSBP4-208ENST00000600628 CCDC51Q96ER9 411 aa9.74□□□□□ -0.85
SSBP4-208ENST00000600628 USP28Q96RU2 1077 aa9.74□□□□□ -0.85
SSBP4-208ENST00000600628 RUSC1Q9BVN2 902 aa9.74□□□□□ -0.85
SSBP4-208ENST00000600628 TIPINQ9BVW5 301 aa9.74□□□□□ -0.85
SSBP4-208ENST00000600628 LMAN2LQ9H0V9 348 aa9.74□□□□□ -0.85
SSBP4-208ENST00000600628 CSRNP2Q9H175 543 aa9.74□□□□□ -0.85
SSBP4-208ENST00000600628 C17orf75Q9HAS0 396 aa9.74□□□□□ -0.85
SSBP4-208ENST00000600628 BMP2KQ9NSY1 1161 aaPredicted RBP9.74□□□□□ -0.85
SSBP4-208ENST00000600628 ARHGAP28Q9P2N2 729 aa9.74□□□□□ -0.85
SSBP4-208ENST00000600628 HCSTQ9UBK5 93 aa9.74□□□□□ -0.85
SSBP4-208ENST00000600628 PLAGL2Q9UPG8 496 aa9.74□□□□□ -0.85
SSBP4-208ENST00000600628 PIN4Q9Y237 131 aaKnown RBP9.74□□□□□ -0.85
SSBP4-208ENST00000600628 ZDHHC9Q9Y397 364 aa9.74□□□□□ -0.85
SSBP4-208ENST00000600628 PCDHB2Q9Y5E7 798 aa9.74□□□□□ -0.85
SSBP4-208ENST00000600628 CNTNAP2Q9UHC6 1331 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms