RNA–Protein interactions for RNA: ENST00000600387.5

ARHGEF1-221, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 3

Gene ARHGEF1, Length 2,272 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-221ENST00000600387 ATP5DP30049 168 aa20.1■□□□□ 0.81
ARHGEF1-221ENST00000600387 SLCO1A2P46721 670 aa20.1■□□□□ 0.81
ARHGEF1-221ENST00000600387 FMO5P49326 533 aa20.1■□□□□ 0.81
ARHGEF1-221ENST00000600387 SPIRE1Q08AE8 756 aa20.1■□□□□ 0.81
ARHGEF1-221ENST00000600387 CCDC137Q6PK04 289 aaKnown RBP20.1■□□□□ 0.81
ARHGEF1-221ENST00000600387 TPTE2Q6XPS3 522 aa20.1■□□□□ 0.81
ARHGEF1-221ENST00000600387 CYFIP1Q7L576 1253 aa20.1■□□□□ 0.81
ARHGEF1-221ENST00000600387 EXOC3L1Q86VI1 746 aa20.1■□□□□ 0.81
ARHGEF1-221ENST00000600387 SLF2Q8IX21 1173 aa20.1■□□□□ 0.81
ARHGEF1-221ENST00000600387 TBC1D16Q8TBP0 767 aa20.1■□□□□ 0.81
ARHGEF1-221ENST00000600387 ART4Q93070 314 aa20.1■□□□□ 0.81
ARHGEF1-221ENST00000600387 ANO3Q9BYT9 981 aa20.1■□□□□ 0.81
ARHGEF1-221ENST00000600387 COG5Q9UP83 839 aa20.1■□□□□ 0.81
ARHGEF1-221ENST00000600387 SPATA31A1Q5TZJ5 1347 aa20.09■□□□□ 0.81
ARHGEF1-221ENST00000600387 IGF2BP3O00425 579 aaKnown RBP eCLIP20.09■□□□□ 0.81
ARHGEF1-221ENST00000600387 TBX3O15119 743 aa20.09■□□□□ 0.81
ARHGEF1-221ENST00000600387 C15orf52Q6ZUT6 534 aaKnown RBP20.09■□□□□ 0.81
ARHGEF1-221ENST00000600387 TRMT10CQ7L0Y3 403 aaKnown RBP20.09■□□□□ 0.81
ARHGEF1-221ENST00000600387 KLHL29Q96CT2 875 aa20.09■□□□□ 0.81
ARHGEF1-221ENST00000600387 FAM163AQ96GL9 167 aaPredicted RBP20.09■□□□□ 0.81
ARHGEF1-221ENST00000600387 MKNK1Q9BUB5 465 aa20.09■□□□□ 0.81
ARHGEF1-221ENST00000600387 GPR88Q9GZN0 384 aa20.09■□□□□ 0.81
ARHGEF1-221ENST00000600387 DBR1Q9UK59 544 aaKnown RBP20.09■□□□□ 0.81
ARHGEF1-221ENST00000600387 EIF3DO15371 548 aaKnown RBP eCLIP20.09■□□□□ 0.81
ARHGEF1-221ENST00000600387 SPATA31C1P0DKV0 1188 aa20.09■□□□□ 0.81
ARHGEF1-221ENST00000600387 MAP2K1Q02750 393 aaPredicted RBP20.09■□□□□ 0.81
ARHGEF1-221ENST00000600387 TCEAL1Q15170 157 aa20.09■□□□□ 0.81
ARHGEF1-221ENST00000600387 PPP2R5AQ15172 486 aa20.09■□□□□ 0.81
ARHGEF1-221ENST00000600387 SEL1L2Q5TEA6 688 aa20.09■□□□□ 0.81
ARHGEF1-221ENST00000600387 LRCH2Q5VUJ6 765 aa20.09■□□□□ 0.81
ARHGEF1-221ENST00000600387 TTBK2Q6IQ55 1244 aa20.09■□□□□ 0.81
ARHGEF1-221ENST00000600387 EP400NLQ6ZTU2 488 aa20.09■□□□□ 0.81
ARHGEF1-221ENST00000600387 BZW1Q7L1Q6 419 aaKnown RBP20.09■□□□□ 0.81
ARHGEF1-221ENST00000600387 KIRREL3Q8IZU9 778 aa20.09■□□□□ 0.81
ARHGEF1-221ENST00000600387 UHMK1Q8TAS1 419 aaKnown RBP20.09■□□□□ 0.81
ARHGEF1-221ENST00000600387 ARHGEF3Q9NR81 526 aa20.09■□□□□ 0.81
ARHGEF1-221ENST00000600387 OLFML3Q9NRN5 406 aa20.09■□□□□ 0.81
ARHGEF1-221ENST00000600387 ARL2BPQ9Y2Y0 163 aa20.09■□□□□ 0.81
ARHGEF1-221ENST00000600387 MEIS1O00470 390 aa20.08■□□□□ 0.81
ARHGEF1-221ENST00000600387 AKR1B1P15121 316 aa20.08■□□□□ 0.81
ARHGEF1-221ENST00000600387 GAP43P17677 238 aa20.08■□□□□ 0.81
ARHGEF1-221ENST00000600387 CALRP27797 417 aaKnown RBP20.08■□□□□ 0.81
ARHGEF1-221ENST00000600387 EIF6P56537 245 aaKnown RBP20.08■□□□□ 0.81
ARHGEF1-221ENST00000600387 IRX1P78414 480 aaPredicted RBP20.08■□□□□ 0.81
ARHGEF1-221ENST00000600387 LINC00116Q8NCU8 138 aa20.08■□□□□ 0.81
ARHGEF1-221ENST00000600387 ETNPPLQ8TBG4 499 aa20.08■□□□□ 0.81
ARHGEF1-221ENST00000600387 ZSWIM1Q9BR11 485 aa20.08■□□□□ 0.81
ARHGEF1-221ENST00000600387 SEPT11Q9NVA2 429 aaKnown RBP20.08■□□□□ 0.81
ARHGEF1-221ENST00000600387 TCP11X1B4DZS4 312 aa20.07■□□□□ 0.8
ARHGEF1-221ENST00000600387 USP17L15C9J2P7 530 aa20.07■□□□□ 0.8
ARHGEF1-221ENST00000600387 USP17L10C9JJH3 530 aa20.07■□□□□ 0.8
ARHGEF1-221ENST00000600387 USP17L13C9JLJ4 530 aa20.07■□□□□ 0.8
ARHGEF1-221ENST00000600387 USP17L11C9JVI0 530 aa20.07■□□□□ 0.8
ARHGEF1-221ENST00000600387 USP17L18D6R9N7 530 aa20.07■□□□□ 0.8
ARHGEF1-221ENST00000600387 USP17L22D6RA61 530 aa20.07■□□□□ 0.8
ARHGEF1-221ENST00000600387 USP17L17D6RBQ6 530 aa20.07■□□□□ 0.8
ARHGEF1-221ENST00000600387 USP17L19D6RCP7 530 aa20.07■□□□□ 0.8
ARHGEF1-221ENST00000600387 USP17L20D6RJB6 530 aa20.07■□□□□ 0.8
ARHGEF1-221ENST00000600387 TGFB1I1O43294 461 aa20.07■□□□□ 0.8
ARHGEF1-221ENST00000600387 GJB6O95452 261 aa20.07■□□□□ 0.8
ARHGEF1-221ENST00000600387 USP17L24Q0WX57 530 aa20.07■□□□□ 0.8
ARHGEF1-221ENST00000600387 KIF22Q14807 665 aa20.07■□□□□ 0.8
ARHGEF1-221ENST00000600387 CYP1B1Q16678 543 aa20.07■□□□□ 0.8
ARHGEF1-221ENST00000600387 TTC27Q6P3X3 843 aa20.07■□□□□ 0.8
ARHGEF1-221ENST00000600387 USP17L6PQ6QN14 398 aa20.07■□□□□ 0.8
ARHGEF1-221ENST00000600387 DPP8Q6V1X1 898 aaPredicted RBP20.07■□□□□ 0.8
ARHGEF1-221ENST00000600387 SERPINB12Q96P63 405 aa20.07■□□□□ 0.8
ARHGEF1-221ENST00000600387 RPS6KC1Q96S38 1066 aa20.07■□□□□ 0.8
ARHGEF1-221ENST00000600387 FGFR1OP2Q9NVK5 253 aa20.07■□□□□ 0.8
ARHGEF1-221ENST00000600387 TAS2R14Q9NYV8 317 aa20.07■□□□□ 0.8
ARHGEF1-221ENST00000600387 APEX2Q9UBZ4 518 aa20.07■□□□□ 0.8
ARHGEF1-221ENST00000600387 PASKQ96RG2 1323 aa20.07■□□□□ 0.8
ARHGEF1-221ENST00000600387 RSPH10B2B2RC85 870 aa20.07■□□□□ 0.8
ARHGEF1-221ENST00000600387 KIF3CO14782 793 aa20.07■□□□□ 0.8
ARHGEF1-221ENST00000600387 RSPH10BP0C881 870 aa20.07■□□□□ 0.8
ARHGEF1-221ENST00000600387 RFX1P22670 979 aa20.07■□□□□ 0.8
ARHGEF1-221ENST00000600387 GABPAQ06546 454 aa20.07■□□□□ 0.8
ARHGEF1-221ENST00000600387 UBAP2Q5T6F2 1119 aaKnown RBP20.07■□□□□ 0.8
ARHGEF1-221ENST00000600387 AADACL2Q6P093 401 aa20.07■□□□□ 0.8
ARHGEF1-221ENST00000600387 MORC4Q8TE76 937 aa20.07■□□□□ 0.8
ARHGEF1-221ENST00000600387 RXFP1Q9HBX9 757 aa20.07■□□□□ 0.8
ARHGEF1-221ENST00000600387 MTUS1Q9ULD2 1270 aa20.07■□□□□ 0.8
ARHGEF1-221ENST00000600387 RTCBQ9Y3I0 505 aaKnown RBP20.07■□□□□ 0.8
ARHGEF1-221ENST00000600387 SLC16A2P36021 539 aa20.06■□□□□ 0.8
ARHGEF1-221ENST00000600387 MKRN3Q13064 507 aaKnown RBP20.06■□□□□ 0.8
ARHGEF1-221ENST00000600387 AP3B2Q13367 1082 aa20.06■□□□□ 0.8
ARHGEF1-221ENST00000600387 CCDC38Q502W7 563 aa20.06■□□□□ 0.8
ARHGEF1-221ENST00000600387 SPATA21Q7Z572 469 aa20.06■□□□□ 0.8
ARHGEF1-221ENST00000600387 MARCH10Q8NA82 808 aaPredicted RBP20.06■□□□□ 0.8
ARHGEF1-221ENST00000600387 CTTNBP2NLQ9P2B4 639 aa20.06■□□□□ 0.8
ARHGEF1-221ENST00000600387 NARFQ9UHQ1 456 aa20.06■□□□□ 0.8
ARHGEF1-221ENST00000600387 DIAPH2O60879 1101 aa20.06■□□□□ 0.8
ARHGEF1-221ENST00000600387 COILP38432 576 aaPredicted RBP20.06■□□□□ 0.8
ARHGEF1-221ENST00000600387 MSH2P43246 934 aa20.06■□□□□ 0.8
ARHGEF1-221ENST00000600387 LACTBP83111 547 aaPredicted RBP20.06■□□□□ 0.8
ARHGEF1-221ENST00000600387 KCNA1Q09470 495 aa20.06■□□□□ 0.8
ARHGEF1-221ENST00000600387 Q4G0T1 1027 aa20.06■□□□□ 0.8
ARHGEF1-221ENST00000600387 NUGGCQ68CJ6 796 aa20.06■□□□□ 0.8
ARHGEF1-221ENST00000600387 CCDC105Q8IYK2 499 aa20.06■□□□□ 0.8
ARHGEF1-221ENST00000600387 ARHGEF2Q92974 986 aaKnown RBP20.06■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms