RNA–Protein interactions for RNA: ENST00000600310.5

UPF1-209, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 4

Gene UPF1, Length 750 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-209ENST00000600310 MBTD1Q05BQ5 628 aa21.37■■□□□ 1.01
UPF1-209ENST00000600310 PCBP1Q15365 356 aaKnown RBP eCLIP21.37■■□□□ 1.01
UPF1-209ENST00000600310 LONRF3Q496Y0 759 aa21.37■■□□□ 1.01
UPF1-209ENST00000600310 DYMQ7RTS9 669 aa21.37■■□□□ 1.01
UPF1-209ENST00000600310 ZBTB8OSQ8IWT0 167 aa21.37■■□□□ 1.01
UPF1-209ENST00000600310 CEP57L1Q8IYX8 460 aa21.37■■□□□ 1.01
UPF1-209ENST00000600310 SPIRE2Q8WWL2 714 aa21.37■■□□□ 1.01
UPF1-209ENST00000600310 DNAJC19Q96DA6 116 aa21.37■■□□□ 1.01
UPF1-209ENST00000600310 C2orf40Q9H1Z8 148 aa21.37■■□□□ 1.01
UPF1-209ENST00000600310 CXXC1Q9P0U4 656 aaPredicted RBP21.37■■□□□ 1.01
UPF1-209ENST00000600310 LARSQ9P2J5 1176 aaKnown RBP21.37■■□□□ 1.01
UPF1-209ENST00000600310 RANBP2P49792 3224 aaKnown RBP21.37■■□□□ 1.01
UPF1-209ENST00000600310 INO80B-WBP1J3KQ70 363 aa21.36■■□□□ 1.01
UPF1-209ENST00000600310 TBCAO75347 108 aaKnown RBP21.36■■□□□ 1.01
UPF1-209ENST00000600310 DSC3Q14574 896 aa21.36■■□□□ 1.01
UPF1-209ENST00000600310 CNNM4Q6P4Q7 775 aa21.36■■□□□ 1.01
UPF1-209ENST00000600310 CATSPER4Q7RTX7 472 aa21.36■■□□□ 1.01
UPF1-209ENST00000600310 STAMQ92783 540 aa21.36■■□□□ 1.01
UPF1-209ENST00000600310 TRIM9Q9C026 710 aa21.36■■□□□ 1.01
UPF1-209ENST00000600310 PARVGQ9HBI0 331 aa21.36■■□□□ 1.01
UPF1-209ENST00000600310 ADGRA3Q8IWK6 1321 aa21.35■■□□□ 1.01
UPF1-209ENST00000600310 CCDC169A6NNP5 214 aa21.35■■□□□ 1.01
UPF1-209ENST00000600310 ZBBXA8MT70 800 aa21.35■■□□□ 1.01
UPF1-209ENST00000600310 ENPP3O14638 875 aa21.35■■□□□ 1.01
UPF1-209ENST00000600310 ZNF202O95125 648 aa21.35■■□□□ 1.01
UPF1-209ENST00000600310 WDR5P61964 334 aaKnown RBP21.35■■□□□ 1.01
UPF1-209ENST00000600310 RTN4RL1Q86UN2 441 aaPredicted RBP21.35■■□□□ 1.01
UPF1-209ENST00000600310 LINC01599Q8WXQ3 324 aa21.35■■□□□ 1.01
UPF1-209ENST00000600310 C7orf25Q9BPX7 421 aa21.35■■□□□ 1.01
UPF1-209ENST00000600310 KIFC3Q9BVG8 833 aa21.35■■□□□ 1.01
UPF1-209ENST00000600310 TSPYL2Q9H2G4 693 aaPredicted RBP21.35■■□□□ 1.01
UPF1-209ENST00000600310 FZD8Q9H461 694 aa21.35■■□□□ 1.01
UPF1-209ENST00000600310 KMT5AQ9NQR1 393 aa21.35■■□□□ 1.01
UPF1-209ENST00000600310 CHST12Q9NRB3 414 aa21.35■■□□□ 1.01
UPF1-209ENST00000600310 ARHGAP28Q9P2N2 729 aa21.35■■□□□ 1.01
UPF1-209ENST00000600310 LOC101059915A0A1B0GWI6 518 aaPredicted RBP21.34■■□□□ 1.01
UPF1-209ENST00000600310 MGEA5O60502 916 aa21.34■■□□□ 1.01
UPF1-209ENST00000600310 GADD45BO75293 160 aaPredicted RBP21.34■■□□□ 1.01
UPF1-209ENST00000600310 EFNA5P52803 228 aa21.34■■□□□ 1.01
UPF1-209ENST00000600310 SMTNP53814 917 aa21.34■■□□□ 1.01
UPF1-209ENST00000600310 AMHR2Q16671 573 aa21.34■■□□□ 1.01
UPF1-209ENST00000600310 FAM187BQ17R55 369 aa21.34■■□□□ 1.01
UPF1-209ENST00000600310 PPP4R3CPQ6ZMV5 832 aa21.34■■□□□ 1.01
UPF1-209ENST00000600310 LIN28BQ6ZN17 250 aaKnown RBP eCLIP21.34■■□□□ 1.01
UPF1-209ENST00000600310 FMR1NBQ8N0W7 255 aaPredicted RBP21.34■■□□□ 1.01
UPF1-209ENST00000600310 MYCT1Q8N699 235 aa21.34■■□□□ 1.01
UPF1-209ENST00000600310 ENGASEQ8NFI3 743 aa21.34■■□□□ 1.01
UPF1-209ENST00000600310 KCNN1Q92952 543 aa21.34■■□□□ 1.01
UPF1-209ENST00000600310 PAGE5Q96GU1 130 aa21.34■■□□□ 1.01
UPF1-209ENST00000600310 GBP4Q96PP9 640 aa21.34■■□□□ 1.01
UPF1-209ENST00000600310 CCDC113Q9H0I3 377 aa21.34■■□□□ 1.01
UPF1-209ENST00000600310 ZHX3Q9H4I2 956 aa21.34■■□□□ 1.01
UPF1-209ENST00000600310 TMEM134Q9H6X4 195 aa21.34■■□□□ 1.01
UPF1-209ENST00000600310 AGPAT5Q9NUQ2 364 aa21.34■■□□□ 1.01
UPF1-209ENST00000600310 SLC4A7Q9Y6M7 1214 aa21.34■■□□□ 1.01
UPF1-209ENST00000600310 SZT2Q5T011 3432 aa21.33■■□□□ 1.01
UPF1-209ENST00000600310 FRMD3A2A2Y4 597 aa21.33■■□□□ 1.01
UPF1-209ENST00000600310 ERLIN2O94905 339 aa21.33■■□□□ 1.01
UPF1-209ENST00000600310 ZSCAN20P17040 1043 aaPredicted RBP21.33■■□□□ 1.01
UPF1-209ENST00000600310 AFMP43652 599 aa21.33■■□□□ 1.01
UPF1-209ENST00000600310 KCNJ6P48051 423 aa21.33■■□□□ 1.01
UPF1-209ENST00000600310 FAM160A1Q05DH4 1040 aa21.33■■□□□ 1.01
UPF1-209ENST00000600310 MAPK6Q16659 721 aa21.33■■□□□ 1.01
UPF1-209ENST00000600310 KRBA2Q6ZNG9 492 aa21.33■■□□□ 1.01
UPF1-209ENST00000600310 CNNM3Q8NE01 707 aa21.33■■□□□ 1.01
UPF1-209ENST00000600310 PHOSPHO2Q8TCD6 241 aa21.33■■□□□ 1.01
UPF1-209ENST00000600310 SLC9A7Q96T83 725 aa21.33■■□□□ 1.01
UPF1-209ENST00000600310 ADAM2Q99965 735 aa21.33■■□□□ 1.01
UPF1-209ENST00000600310 RGS18Q9NS28 235 aa21.33■■□□□ 1.01
UPF1-209ENST00000600310 C1orf112Q9NSG2 853 aa21.33■■□□□ 1.01
UPF1-209ENST00000600310 PRMT7Q9NVM4 692 aaPredicted RBP21.33■■□□□ 1.01
UPF1-209ENST00000600310 PHLPP2Q6ZVD8 1323 aa21.32■■□□□ 1
UPF1-209ENST00000600310 DENND3A2RUS2 1198 aa21.32■■□□□ 1
UPF1-209ENST00000600310 SLC16A4O15374 487 aa21.32■■□□□ 1
UPF1-209ENST00000600310 TRAK2O60296 914 aa21.32■■□□□ 1
UPF1-209ENST00000600310 TSPAN1O60635 241 aa21.32■■□□□ 1
UPF1-209ENST00000600310 PRPF40AO75400 957 aaKnown RBP21.32■■□□□ 1
UPF1-209ENST00000600310 AMHP03971 560 aa21.32■■□□□ 1
UPF1-209ENST00000600310 IDEP14735 1019 aa21.32■■□□□ 1
UPF1-209ENST00000600310 GAP43P17677 238 aa21.32■■□□□ 1
UPF1-209ENST00000600310 AXLP30530 894 aa21.32■■□□□ 1
UPF1-209ENST00000600310 HOXA11P31270 313 aaPredicted RBP21.32■■□□□ 1
UPF1-209ENST00000600310 NCKAP1LP55160 1127 aa21.32■■□□□ 1
UPF1-209ENST00000600310 UBE2HP62256 183 aa21.32■■□□□ 1
UPF1-209ENST00000600310 DEFB103AP81534 67 aa21.32■■□□□ 1
UPF1-209ENST00000600310 SNW1Q13573 536 aaKnown RBP21.32■■□□□ 1
UPF1-209ENST00000600310 CCDC65Q8IXS2 484 aa21.32■■□□□ 1
UPF1-209ENST00000600310 TMEM161BQ8NDZ6 487 aa21.32■■□□□ 1
UPF1-209ENST00000600310 PRIMPOLQ96LW4 560 aa21.32■■□□□ 1
UPF1-209ENST00000600310 FIZ1Q96SL8 496 aa21.32■■□□□ 1
UPF1-209ENST00000600310 PANK4Q9NVE7 773 aa21.32■■□□□ 1
UPF1-209ENST00000600310 SEL1LQ9UBV2 794 aa21.32■■□□□ 1
UPF1-209ENST00000600310 PIN4Q9Y237 131 aaKnown RBP21.32■■□□□ 1
UPF1-209ENST00000600310 H0YCG3 227 aa21.31■■□□□ 1
UPF1-209ENST00000600310 K7ERI5 159 aa21.31■■□□□ 1
UPF1-209ENST00000600310 ACKR2O00590 384 aa21.31■■□□□ 1
UPF1-209ENST00000600310 PRKCBP05771 671 aa21.31■■□□□ 1
UPF1-209ENST00000600310 MYL1P05976 194 aa21.31■■□□□ 1
UPF1-209ENST00000600310 MAPTP10636 758 aaKnown RBP21.31■■□□□ 1
UPF1-209ENST00000600310 SCP2P22307 547 aa21.31■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms