RNA–Protein interactions for RNA: ENST00000600286.1

USHBP1-210, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 4

Gene USHBP1, Length 598 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-210ENST00000600286 NR1I2O75469 434 aa18.42■□□□□ 0.54
USHBP1-210ENST00000600286 ERLIN2O94905 339 aa18.42■□□□□ 0.54
USHBP1-210ENST00000600286 SMC2O95347 1197 aa18.42■□□□□ 0.54
USHBP1-210ENST00000600286 ZSCAN20P17040 1043 aaPredicted RBP18.42■□□□□ 0.54
USHBP1-210ENST00000600286 LIG1P18858 919 aa18.42■□□□□ 0.54
USHBP1-210ENST00000600286 MDM2Q00987 491 aaPredicted RBP18.42■□□□□ 0.54
USHBP1-210ENST00000600286 NFX1Q12986 1120 aaKnown RBP18.42■□□□□ 0.54
USHBP1-210ENST00000600286 SNW1Q13573 536 aaKnown RBP18.42■□□□□ 0.54
USHBP1-210ENST00000600286 TMEM132AQ24JP5 1023 aa18.42■□□□□ 0.54
USHBP1-210ENST00000600286 CNNM4Q6P4Q7 775 aa18.42■□□□□ 0.54
USHBP1-210ENST00000600286 PSRC1Q6PGN9 363 aaPredicted RBP18.42■□□□□ 0.54
USHBP1-210ENST00000600286 STXBP4Q6ZWJ1 553 aa18.42■□□□□ 0.54
USHBP1-210ENST00000600286 FAM178BQ8IXR5 827 aa18.42■□□□□ 0.54
USHBP1-210ENST00000600286 FTHL17Q9BXU8 183 aa18.42■□□□□ 0.54
USHBP1-210ENST00000600286 IFIH1Q9BYX4 1025 aaKnown RBP18.42■□□□□ 0.54
USHBP1-210ENST00000600286 CDHR5Q9HBB8 845 aa18.42■□□□□ 0.54
USHBP1-210ENST00000600286 DACT1Q9NYF0 836 aa18.42■□□□□ 0.54
USHBP1-210ENST00000600286 LOXHD1Q8IVV2 1947 aa18.42■□□□□ 0.54
USHBP1-210ENST00000600286 TRIP12Q14669 1992 aaPredicted RBP18.42■□□□□ 0.54
USHBP1-210ENST00000600286 CDH23Q9H251 3354 aa18.41■□□□□ 0.54
USHBP1-210ENST00000600286 TRAK2O60296 914 aa18.41■□□□□ 0.54
USHBP1-210ENST00000600286 EFCAB14O75071 495 aa18.41■□□□□ 0.54
USHBP1-210ENST00000600286 MBD3O95983 291 aa18.41■□□□□ 0.54
USHBP1-210ENST00000600286 FGBP02675 491 aa18.41■□□□□ 0.54
USHBP1-210ENST00000600286 CXCL10P02778 98 aa18.41■□□□□ 0.54
USHBP1-210ENST00000600286 ITGB8P26012 769 aa18.41■□□□□ 0.54
USHBP1-210ENST00000600286 MCM4P33991 863 aa18.41■□□□□ 0.54
USHBP1-210ENST00000600286 NPTX2P47972 431 aa18.41■□□□□ 0.54
USHBP1-210ENST00000600286 ZNF131P52739 623 aa18.41■□□□□ 0.54
USHBP1-210ENST00000600286 STRN3Q13033 797 aa18.41■□□□□ 0.54
USHBP1-210ENST00000600286 IKBKEQ14164 716 aa18.41■□□□□ 0.54
USHBP1-210ENST00000600286 LPIN1Q14693 890 aa18.41■□□□□ 0.54
USHBP1-210ENST00000600286 MAPK6Q16659 721 aa18.41■□□□□ 0.54
USHBP1-210ENST00000600286 GPR153Q6NV75 609 aa18.41■□□□□ 0.54
USHBP1-210ENST00000600286 CNKSR3Q6P9H4 555 aa18.41■□□□□ 0.54
USHBP1-210ENST00000600286 TRAF7Q6Q0C0 670 aa18.41■□□□□ 0.54
USHBP1-210ENST00000600286 UNC13DQ70J99 1090 aa18.41■□□□□ 0.54
USHBP1-210ENST00000600286 IFNLR1Q8IU57 520 aaPredicted RBP18.41■□□□□ 0.54
USHBP1-210ENST00000600286 ELOA2Q8IYF1 753 aaPredicted RBP18.41■□□□□ 0.54
USHBP1-210ENST00000600286 TDHQ8IZJ6 230 aa18.41■□□□□ 0.54
USHBP1-210ENST00000600286 DAW1Q8N136 415 aa18.41■□□□□ 0.54
USHBP1-210ENST00000600286 DNAJC19Q96DA6 116 aa18.41■□□□□ 0.54
USHBP1-210ENST00000600286 NTPCRQ9BSD7 190 aaKnown RBP18.41■□□□□ 0.54
USHBP1-210ENST00000600286 BLZF1Q9H2G9 400 aa18.41■□□□□ 0.54
USHBP1-210ENST00000600286 PRMT7Q9NVM4 692 aaPredicted RBP18.41■□□□□ 0.54
USHBP1-210ENST00000600286 RNF216Q9NWF9 866 aaPredicted RBP18.41■□□□□ 0.54
USHBP1-210ENST00000600286 NOC2LQ9Y3T9 749 aaKnown RBP18.41■□□□□ 0.54
USHBP1-210ENST00000600286 EYSQ5T1H1 3165 aa18.4■□□□□ 0.54
USHBP1-210ENST00000600286 NBNO60934 754 aa18.4■□□□□ 0.54
USHBP1-210ENST00000600286 MAPTP10636 758 aaKnown RBP18.4■□□□□ 0.54
USHBP1-210ENST00000600286 CD52P31358 61 aa18.4■□□□□ 0.54
USHBP1-210ENST00000600286 MAPK7Q13164 816 aa18.4■□□□□ 0.54
USHBP1-210ENST00000600286 POSTNQ15063 836 aa18.4■□□□□ 0.54
USHBP1-210ENST00000600286 TMEM134Q9H6X4 195 aa18.4■□□□□ 0.54
USHBP1-210ENST00000600286 MRPL44Q9H9J2 332 aaKnown RBP18.4■□□□□ 0.54
USHBP1-210ENST00000600286 IFT122Q9HBG6 1241 aa18.4■□□□□ 0.54
USHBP1-210ENST00000600286 EXOC1Q9NV70 894 aa18.4■□□□□ 0.54
USHBP1-210ENST00000600286 PADI3Q9ULW8 664 aa18.4■□□□□ 0.54
USHBP1-210ENST00000600286 ST3GAL5Q9UNP4 418 aa18.4■□□□□ 0.54
USHBP1-210ENST00000600286 PCDHB13Q9Y5F0 798 aa18.4■□□□□ 0.54
USHBP1-210ENST00000600286 DENND3A2RUS2 1198 aa18.39■□□□□ 0.53
USHBP1-210ENST00000600286 K7ENM7 598 aa18.39■□□□□ 0.53
USHBP1-210ENST00000600286 SLC16A4O15374 487 aa18.39■□□□□ 0.53
USHBP1-210ENST00000600286 AXLP30530 894 aa18.39■□□□□ 0.53
USHBP1-210ENST00000600286 PSMD2Q13200 908 aa18.39■□□□□ 0.53
USHBP1-210ENST00000600286 CUL4BQ13620 913 aa18.39■□□□□ 0.53
USHBP1-210ENST00000600286 ALCAMQ13740 583 aa18.39■□□□□ 0.53
USHBP1-210ENST00000600286 PLEKHG4Q58EX7 1191 aa18.39■□□□□ 0.53
USHBP1-210ENST00000600286 APBB1IPQ7Z5R6 666 aaPredicted RBP18.39■□□□□ 0.53
USHBP1-210ENST00000600286 GRAMD1CQ8IYS0 662 aa18.39■□□□□ 0.53
USHBP1-210ENST00000600286 DBF4BQ8NFT6 615 aa18.39■□□□□ 0.53
USHBP1-210ENST00000600286 BSNDQ8WZ55 320 aa18.39■□□□□ 0.53
USHBP1-210ENST00000600286 PRIMPOLQ96LW4 560 aa18.39■□□□□ 0.53
USHBP1-210ENST00000600286 GTPBP4Q9BZE4 634 aaKnown RBP18.39■□□□□ 0.53
USHBP1-210ENST00000600286 UBE2OQ9C0C9 1292 aaKnown RBP18.39■□□□□ 0.53
USHBP1-210ENST00000600286 CHST12Q9NRB3 414 aa18.39■□□□□ 0.53
USHBP1-210ENST00000600286 RMND1Q9NWS8 449 aa18.39■□□□□ 0.53
USHBP1-210ENST00000600286 EVPLQ92817 2033 aa18.39■□□□□ 0.53
USHBP1-210ENST00000600286 ABHD14A-ACY1A0A1B0GW23 586 aa18.38■□□□□ 0.53
USHBP1-210ENST00000600286 ACRP10323 421 aa18.38■□□□□ 0.53
USHBP1-210ENST00000600286 MBTPS1Q14703 1052 aa18.38■□□□□ 0.53
USHBP1-210ENST00000600286 CDCA2Q69YH5 1023 aaPredicted RBP18.38■□□□□ 0.53
USHBP1-210ENST00000600286 HAUS6Q7Z4H7 955 aa18.38■□□□□ 0.53
USHBP1-210ENST00000600286 FAM228AQ86W67 206 aa18.38■□□□□ 0.53
USHBP1-210ENST00000600286 SFR1Q86XK3 245 aa18.38■□□□□ 0.53
USHBP1-210ENST00000600286 TMEM40Q8WWA1 233 aa18.38■□□□□ 0.53
USHBP1-210ENST00000600286 AGO3Q9H9G7 860 aaKnown RBP18.38■□□□□ 0.53
USHBP1-210ENST00000600286 OLFML3Q9NRN5 406 aa18.38■□□□□ 0.53
USHBP1-210ENST00000600286 FRMD3A2A2Y4 597 aa18.37■□□□□ 0.53
USHBP1-210ENST00000600286 CSDE1O75534 798 aaKnown RBP18.37■□□□□ 0.53
USHBP1-210ENST00000600286 BAIAP3O94812 1187 aa18.37■□□□□ 0.53
USHBP1-210ENST00000600286 KIF20AO95235 890 aa18.37■□□□□ 0.53
USHBP1-210ENST00000600286 RPN1P04843 607 aaKnown RBP18.37■□□□□ 0.53
USHBP1-210ENST00000600286 PRKCBP05771 671 aa18.37■□□□□ 0.53
USHBP1-210ENST00000600286 KCNJ6P48051 423 aa18.37■□□□□ 0.53
USHBP1-210ENST00000600286 NCKAP1LP55160 1127 aa18.37■□□□□ 0.53
USHBP1-210ENST00000600286 MBTD1Q05BQ5 628 aa18.37■□□□□ 0.53
USHBP1-210ENST00000600286 COASYQ13057 564 aa18.37■□□□□ 0.53
USHBP1-210ENST00000600286 PRPF4BQ13523 1007 aaKnown RBP18.37■□□□□ 0.53
USHBP1-210ENST00000600286 ZNF365Q70YC5 407 aa18.37■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms